G2030937


Basic Information

Item Value
gene id G2030937
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 41887698 ~ 41903072 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2322978
CTTCATTCCAACAACAGTAGTAGAGAGCTGATCTGAAATGACAGAATGTCACCACTGATAAGGGAGAGCTTGGTCCCACTTCCGATCTCAAATATGTTAGCCCTCTGCTCAACACAGTAGTACAGACCCACGTCACTCTCTGAGATGTTCAGTATGCTCAGATTGCTTCGGAACAGGCCTGTGTCATACACTGACTCGGAACGACCATCAAACCTTTTGAGGCTCAGGGGTGTATTTGTCTTTATAGTGATGGCTACTGAAAGAGTGGCATCAGGACGAAGAACAAACCACATGACCTCATACTCCAGGGTAATGTCACAGCCAAGGGTGACTGTGTCCCCTGGTTCCACTAGAATCTCATTTTGACCTGCTCCAAAAG
>TU2322979
aaaaatataatttaatcaattttagaataagctgtaacgtaacaatgcggggaaaagtcaagtggtctgaatacattccgaatacactatatacagtataacagcagattaaaaaatatatttatagttGCAGATTTATGGTTAAACCAGTACTGTTTTGTTAATTGGTCCTTGGATGGAATGGTAGATATGACGTAAATGATTTAAGATCAGATGTCTAAAATACATgttcaatacatttctatctcTAACACCCTGAACATACTGGTCATTCAATCAACACTGGAataacacaataaataaaaaGATGTGAAACCAATCTGGACACATGTAGATCCCATCGTCCACCTACTTAGATGTATGGAGTGGCAGAAGTTTAACCCCGTGTGTCACAGGAGACTTCATAAAACACCAGAAATGTTACTTTTACTCTCAGCATCTTTACATTTTATTCCTGTTTGTCCTCCTATATTCACTCTTGGTCCTCTAGATGACAGGCTTCAACCAAATTGTTCCAGAATCCTCATTTTGTCAGGATCTACAGTGTAAGAGGAcagctatttttttttatcttcatGAAATGCGCAATAAACACCAATACCCGATTTACAGACAGTGAGTTGCACCACATaagtataaaaaaaatacatttcagaaaGATGATTCAATGTGAAAATTAGAATTATTGGGTGCAAATAATTTCTTAGCAGGTCGTCAACAGcagaagacacagagagcagaccCCAGCACAGAGAACATGGGGGCTATGATCAAGGTGATAAACCATGACAACTTCATCCCAACAACAGTAGTAGAGAGCTGATCACCACTGATAAGGGAGAGCTTGGTCCCACTTCCGATCTCAAATATGTTAGCCCTCTGCTCAACACAGTAGTACAGACCCACGTCACTCTCTGAGATGTTCAGTATGCTCAGATTGCTTCGGAACAGGCCTGTGTCATACACTGACTCGGAACGACCATCAAACCTTTTGAGGCTCAGGGGTGTATTTGTCTTTATAGTGATGGCTACTGAAAGAGTGGCATCAGGACGAAGAACAAACCACATGACCTCATACTCCAGGGTAATGTCACAGCCAAGGGTGACTGTGTCCCCTGGTTCCACTAGAATCTCATTTTGACCTGCTCCAAAAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2322978 False 379 lncRNA 0.47 2 41887698 41903072
TU2322979 True 1154 lncRNA 0.39 2 41887698 41889159

Neighbor

gene id symbol gene type direction distance location
LOC110506142 LOC106562525 coding downstream 24766 41827548 ~ 41862932 (-)
LOC110506143 LOC106562454 coding downstream 107830 41755021 ~ 41779868 (-)
LOC118944455 lysm2 coding downstream 149605 41723275 ~ 41738093 (-)
LOC118944452 LOC106587168 coding downstream 212225 41665197 ~ 41675473 (-)
LOC118944424 LOC106587313 coding downstream 222618 41660302 ~ 41665080 (-)
LOC118936287 NA coding upstream 3752 41906824 ~ 41916531 (-)
LOC118944569 NA coding upstream 7731 41910803 ~ 41911004 (-)
LOC110506839 NA coding upstream 81566 41984638 ~ 41986095 (-)
LOC110506148 LOC106587747 coding upstream 83213 41986285 ~ 42056568 (-)
LOC110506147 bend2 coding upstream 164660 42067732 ~ 42070472 (-)
G2030831 NA non-coding downstream 21378 41866019 ~ 41866320 (-)
G2030830 NA non-coding downstream 23364 41864096 ~ 41864334 (-)
G2030784 NA non-coding downstream 63657 41823533 ~ 41824041 (-)
G2030785 LOC106587817 non-coding downstream 66075 41814750 ~ 41821623 (-)
G2030811 NA non-coding downstream 81993 41805475 ~ 41805705 (-)
G2030945 NA non-coding upstream 242 41903314 ~ 41921439 (-)
G2030982 NA non-coding upstream 71183 41974255 ~ 41977636 (-)
G2030984 NA non-coding upstream 75422 41978494 ~ 41978943 (-)
G2031004 NA non-coding upstream 128710 42031782 ~ 42032359 (-)
G2031017 NA non-coding upstream 157806 42060878 ~ 42061560 (-)
LOC110515873 LOC106562546 other downstream 319785 41461857 ~ 41567947 (-)
G2030291 NA other downstream 675846 41211477 ~ 41211852 (-)
G2030156 NA other downstream 980505 40906623 ~ 40907193 (-)
G2030162 NA other downstream 988677 40898470 ~ 40899021 (-)
G2030157 NA other downstream 999014 40887603 ~ 40888684 (-)
LOC110506841 cart other upstream 244288 42147360 ~ 42148871 (-)
LOC118944568 LOC106562433 other upstream 313367 42214901 ~ 42217502 (-)
G2031225 NA other upstream 440210 42343282 ~ 42346725 (-)
G2031259 NA other upstream 465182 42368254 ~ 42369909 (-)
G2031286 LOC106562727 other upstream 556185 42459257 ~ 42461315 (-)

Expression


Co-expression Network