G2081488


Basic Information

Item Value
gene id G2081488
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 39296409 ~ 39296666 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2380053
agaggcagacagggaaatcatggttgttgtgtaggacatatgttagaggcagacagggaaatcATGGTTGCTGTGTAGGACATATGTcagaggcagacagggaaatgatggttgctgtgtaggacatatgttagaggcagacagggaaatgatggttgttgtgtaggacatatgttagaggcagacagggaaatgatggttgctgtgtaggacatatgttagaggcagacagggaaatcATGGTTGCTGTGTAGGACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2380053 True 258 lncRNA 0.46 1 39296409 39296666

Neighbor

gene id symbol gene type direction distance location
LOC118944799 NA coding upstream 256784 39039573 ~ 39039625 (+)
LOC110508002 LOC106581401 coding upstream 668239 38619550 ~ 38628170 (+)
LOC110507217 NA coding upstream 821810 38469918 ~ 38474599 (+)
LOC110508017 NA coding upstream 1236296 38052633 ~ 38060113 (+)
LOC110508012 LOC106581399 coding upstream 1727536 37536529 ~ 37568873 (+)
LOC110508028 neus coding downstream 371323 39667989 ~ 39681560 (+)
LOC110507222 LOC106581437 coding downstream 397895 39694561 ~ 39701212 (+)
LOC110507223 LOC106613251 coding downstream 484523 39781189 ~ 39938079 (+)
ssr3 LOC106581450 coding downstream 998165 40294831 ~ 40297552 (+)
LOC110508037 LOC106581457 coding downstream 1364580 40661246 ~ 40670079 (+)
G2081485 NA non-coding upstream 1273 39294903 ~ 39295136 (+)
G2081445 NA non-coding upstream 33649 39262550 ~ 39262760 (+)
G2081431 NA non-coding upstream 44675 39251439 ~ 39251734 (+)
G2081427 NA non-coding upstream 47045 39249145 ~ 39249364 (+)
G2081405 NA non-coding upstream 61134 39235027 ~ 39235275 (+)
G2081489 NA non-coding downstream 283 39296949 ~ 39297468 (+)
G2081502 NA non-coding downstream 15707 39312373 ~ 39312597 (+)
G2081531 NA non-coding downstream 37875 39334541 ~ 39334865 (+)
G2081544 NA non-coding downstream 49474 39346140 ~ 39346354 (+)
G2081548 NA non-coding downstream 52981 39349647 ~ 39350523 (+)
G2080014 NA other upstream 1351258 37944932 ~ 37945151 (+)
G2079657 NA other upstream 1477123 37815848 ~ 37819286 (+)
G2079468 LOC106581367 other upstream 1928273 37366739 ~ 37368136 (+)
G2079197 NA other upstream 2015577 37279105 ~ 37280832 (+)
LOC110536894 NA other upstream 2019552 37031161 ~ 37276857 (+)
G2081884 LOC106581433 other downstream 530992 39827658 ~ 39837383 (+)
G2081949 NA other downstream 635208 39931874 ~ 39933835 (+)
G2082162 NA other downstream 660549 39957215 ~ 39957751 (+)
LOC110508042 LOC106613262 other downstream 1546848 40840706 ~ 40847141 (+)

Expression


Co-expression Network