G2081845


Basic Information

Item Value
gene id G2081845
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 39776162 ~ 39822521 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2380467
gaaacTCACAACAATACCTTTGTCAGATAACACTGTTAAACGAAGAATGTATGCTCTGACTGAATGACTCAAAAACTCCCCAGCTTATGCTCTCCAAATGGACGATAGCTGTgaatgtaacagatgtgaaacggctagcttagttagcgtgggcgctaaatagcgtttcaatcagtgacgtcacttgctctgagaccttgaagtagtagttccccttgctctgcaagggccgcggcttttgtggagcgatgggtaacgatgcttcgagggtgactgttgatgtgtgcagaaggtccctagttcgcgcccggctatgggcgaggggacggtctaaatttgtactgttacattgatgctgttgacccggattactggttgctgcggaaaaaggaggaaagtcaacagatgtgaaacggctagcttagttagcgtgggcgctaaatagcgtttcaatcagtgacgtcacttccaagaccttgaagtagtagttccccttgctctgcaagggccgcggcttttgtggcgcgatgggtaacgatgggtgactgttgatgtgtgcagaaggtccctagttcgcgcccgggtatgggcgaggggacggtctaaatttgtactgttacattgatgctgttgacccggattactggttgctgcggaaaaaggaggaaGCAGTGTCGGTGG
>TU2380468
gaaacTCACAACAATACCTTTGTCAGATAACACTGTTAAACGAAGAATGTATGCTCTGACTGAATGACTCAAAAACTCCCCAGCTTATGCTCTCCAAATGGACGATAGCTGTgaatgtaacagatgtgaaacggctagcttagttagcgtgggcgctaaatagcgtttcaatcagtgacgtcacttgctctgagaccttgaagtagtagttccccttgctctgcaagggccgcggcttttgtggagcgatgggtaacgatgcttcgagggtgactgttgatgtgtgcagaaggtccctagttcgcgcccggctatgggcgaggggacggtctaaatttgtactgttacattgatgctgttgacccggattactggttgctgcggaaaaaggaggaaagtcaacagatgtgaaacggctagcttagttagcgtgggcgctaaatagcgtttcaatcagtgacgtcacttgctctgagaccttgaagtagtagttccccttgctctgcaagggccgcggcttttgtggagcgatgggtaacgatg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2380467 False 681 lncRNA 0.50 2 39776162 39806327
TU2380468 True 543 lncRNA 0.49 2 39776162 39822521

Neighbor

gene id symbol gene type direction distance location
LOC110507222 LOC106581437 coding upstream 74950 39694561 ~ 39701212 (+)
LOC110508028 neus coding upstream 94602 39667989 ~ 39681560 (+)
LOC118944799 NA coding upstream 736537 39039573 ~ 39039625 (+)
LOC110508002 LOC106581401 coding upstream 1147992 38619550 ~ 38628170 (+)
LOC110507217 NA coding upstream 1301563 38469918 ~ 38474599 (+)
ssr3 LOC106581450 coding downstream 472310 40294831 ~ 40297552 (+)
LOC110508037 LOC106581457 coding downstream 838725 40661246 ~ 40670079 (+)
LOC118944712 NA coding downstream 844496 40667017 ~ 40668632 (+)
LOC110507225 LOC106581476 coding downstream 869882 40692403 ~ 40840064 (+)
LOC110508042 LOC106613262 coding downstream 1018185 40840706 ~ 40847141 (+)
G2081813 NA non-coding upstream 48137 39725918 ~ 39728025 (+)
G2081800 NA non-coding upstream 66406 39709441 ~ 39709756 (+)
G2081797 NA non-coding upstream 72178 39703459 ~ 39703984 (+)
G2081796 NA non-coding upstream 74407 39701470 ~ 39701755 (+)
G2081793 NA non-coding upstream 84210 39683582 ~ 39691952 (+)
G2081909 NA non-coding downstream 35939 39858460 ~ 39862653 (+)
G2081926 NA non-coding downstream 64205 39886726 ~ 39887553 (+)
G2081942 NA non-coding downstream 99304 39921825 ~ 39922050 (+)
G2081943 NA non-coding downstream 100981 39923502 ~ 39923717 (+)
LOC110507223 LOC106613251 non-coding downstream 114560 39781189 ~ 39938079 (+)
G2080014 NA other upstream 1831011 37944932 ~ 37945151 (+)
G2079657 NA other upstream 1956876 37815848 ~ 37819286 (+)
G2079468 LOC106581367 other upstream 2408026 37366739 ~ 37368136 (+)
G2079197 NA other upstream 2495330 37279105 ~ 37280832 (+)
LOC110536894 NA other upstream 2499305 37031161 ~ 37276857 (+)
G2081884 LOC106581433 other downstream 5137 39827658 ~ 39837383 (+)
G2081949 NA other downstream 109353 39931874 ~ 39933835 (+)
G2082162 NA other downstream 134694 39957215 ~ 39957751 (+)

Expression


Co-expression Network