G2082310


Basic Information

Item Value
gene id G2082310
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 40121654 ~ 40125697 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2381079
ttaccataccatctaccataccatctactcccctttaccataccatctactcccctttaccataccatctactcccctttaccataccatctactcccctttaccataccatctactcccctttaccataccatctagtcccctttaccataccatctactcccctttaccataccatctaaccccctttaccataccatctactcccctttaccataccatctaccctcctttaccataccatctactcccctttaccataccatctacccccctttacca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2381079 True 282 lncRNA 0.45 2 40121654 40125697

Neighbor

gene id symbol gene type direction distance location
LOC110507223 LOC106613251 coding upstream 183575 39781189 ~ 39938079 (+)
LOC110507222 LOC106581437 coding upstream 420442 39694561 ~ 39701212 (+)
LOC110508028 neus coding upstream 440094 39667989 ~ 39681560 (+)
LOC118944799 NA coding upstream 1082029 39039573 ~ 39039625 (+)
LOC110508002 LOC106581401 coding upstream 1493484 38619550 ~ 38628170 (+)
ssr3 LOC106581450 coding downstream 169134 40294831 ~ 40297552 (+)
LOC110508037 LOC106581457 coding downstream 535549 40661246 ~ 40670079 (+)
LOC118944712 NA coding downstream 541320 40667017 ~ 40668632 (+)
LOC110507225 LOC106581476 coding downstream 566706 40692403 ~ 40840064 (+)
LOC110508042 LOC106613262 coding downstream 715009 40840706 ~ 40847141 (+)
G2082296 NA non-coding upstream 10451 40106570 ~ 40111203 (+)
G2082187 NA non-coding upstream 94255 40027063 ~ 40027399 (+)
G2082183 NA non-coding upstream 116407 40005048 ~ 40005247 (+)
G2082179 NA non-coding upstream 121772 39999676 ~ 39999882 (+)
G2082178 NA non-coding upstream 125140 39996283 ~ 39996514 (+)
G2082312 NA non-coding downstream 4392 40130089 ~ 40130382 (+)
G2082314 NA non-coding downstream 8237 40133934 ~ 40134391 (+)
G2082377 NA non-coding downstream 127140 40252837 ~ 40253199 (+)
G2082378 NA non-coding downstream 127956 40253653 ~ 40253962 (+)
G2082379 NA non-coding downstream 128417 40254114 ~ 40254546 (+)
G2082162 NA other upstream 163903 39957215 ~ 39957751 (+)
G2081949 NA other upstream 187819 39931874 ~ 39933835 (+)
G2081884 LOC106581433 other upstream 284271 39827658 ~ 39837383 (+)
G2080014 NA other upstream 2176503 37944932 ~ 37945151 (+)
G2083005 NA other downstream 855673 40981370 ~ 40984854 (+)
G2083239 NA other downstream 1086507 41212204 ~ 41212772 (+)
LOC110507232 LOC106593204 other downstream 1380662 41485189 ~ 41507173 (+)
G2083851 NA other downstream 1845562 41971259 ~ 42112036 (+)

Expression


Co-expression Network