G2082525


Basic Information

Item Value
gene id G2082525
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 40636576 ~ 40640391 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2381316
GATCAAAATATGTTGTAGACAAAACAATGAAAAAGGTCTGTCTGGTAACCTCAATAAATAAGCAGATttgttgttgaacaagtcattgcctgtatagatttgttgttgttgaacaagtcattgcctgtatagatttgttgttgttgaacaagtcattgcctgtatagatttgttgaacaagtcgttgcctgtatagatttgttgttgttgaacaagtcattgcctgtatagatttgttgaacaagtcagtgcctgtatagatttgttgttgttgaacaagtcattgcctgtatagatttgttgaacaagtcgttgcctgtatagatttgttgaacaagtcgttgcctgtatagatttgttgaacaagtcagtgcctgtatagatttgttgttgttgaacaagtcattgcctgtatagatttgatgttgttgaacaagtcattgcctgtatagatttgttgaacaagtcgttgcctgtatagatttgatgttgttgaacaagtcattgcctgtatagatttgttgaacaagtcgttgcctgtatagatttgttgaacaagtcgttgcctgtatagatttgatgttgttgaacaagtcattgcctgtatagatttgttgaacaagtcgttgcctgtatagatttgttgaacaagtcattgcctgtatagatttgttgaacaagtcgttgcctgtatagatttgttgaacaagtcgttgcctgtatagatttgttgaacaagtcattgcctgtatagatttttgtcgttgaacaagtcattgcctgtatagatttgttgaacaagtcgttgcctgtatagatttgttgaacaagtcgttgcctgtatagatttgttgaacaagtcattgcctgtatagatttgttgaacaagtcgttgcctgtatagatttgaTGTTCTTGAACAAGtcattgcctgtatagatttgttgaacaagtcgttgcctgtatagatttgttgttgttgaacaagtcagtgcctgtatagatttgttaTTGTTGAACAAGTTgttgcctgtatagatttgttgaacaagtcagtgcctgtatagatttgttgttga

Function

NR:

description
zinc finger protein 850-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2381316 True 1079 lncRNA 0.36 2 40636576 40640391

Neighbor

gene id symbol gene type direction distance location
ssr3 LOC106581450 coding upstream 339024 40294831 ~ 40297552 (+)
LOC110507223 LOC106613251 coding upstream 698497 39781189 ~ 39938079 (+)
LOC110507222 LOC106581437 coding upstream 935364 39694561 ~ 39701212 (+)
LOC110508028 neus coding upstream 955016 39667989 ~ 39681560 (+)
LOC118944799 NA coding upstream 1596951 39039573 ~ 39039625 (+)
LOC110508037 LOC106581457 coding downstream 20855 40661246 ~ 40670079 (+)
LOC118944712 NA coding downstream 26626 40667017 ~ 40668632 (+)
LOC110507225 LOC106581476 coding downstream 52012 40692403 ~ 40840064 (+)
LOC110508042 LOC106613262 coding downstream 200315 40840706 ~ 40847141 (+)
LOC110507226 LOC106581479 coding downstream 216739 40857130 ~ 40878102 (+)
G2082517 NA non-coding upstream 12947 40622440 ~ 40623629 (+)
G2082518 NA non-coding upstream 16481 40619412 ~ 40620095 (+)
G2082516 NA non-coding upstream 18733 40617547 ~ 40617843 (+)
G2082500 NA non-coding upstream 40295 40596030 ~ 40596281 (+)
G2082476 NA non-coding upstream 119640 40516372 ~ 40516936 (+)
G2082509 NA non-coding downstream 31299 40671690 ~ 40672527 (+)
G2082554 NA non-coding downstream 55217 40695608 ~ 40696534 (+)
G2082604 NA non-coding downstream 165082 40805473 ~ 40805922 (+)
G2082609 NA non-coding downstream 171704 40812095 ~ 40812351 (+)
G2082162 NA other upstream 678825 39957215 ~ 39957751 (+)
G2081949 NA other upstream 702741 39931874 ~ 39933835 (+)
G2081884 LOC106581433 other upstream 799193 39827658 ~ 39837383 (+)
G2080014 NA other upstream 2691425 37944932 ~ 37945151 (+)
G2083005 NA other downstream 340979 40981370 ~ 40984854 (+)
G2083239 NA other downstream 571813 41212204 ~ 41212772 (+)
LOC110507232 LOC106593204 other downstream 865968 41485189 ~ 41507173 (+)
G2083851 NA other downstream 1330868 41971259 ~ 42112036 (+)

Expression


Co-expression Network