LOC110509026 (LOC106598516)


Basic Information

Item Value
gene id LOC110509026
gene name LOC106598516
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 33156641 ~ 33165714 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021589967.2
TTGGCTGGCCCGTCTCCTCTTCTTTAGGCCCTTGGCCAGTAAGCTGTCTCTATATAGCATTACATTCTTGTAGGCGACAGCAGAACTTGAGGACAGACCTTTTCACAGAGTGATTCTACATACAAACTAATAGTGTTTAGGCTTAGAGAATGTGTAAAGGGTTTGCAGtcttacagcaaacatgtcttgaGAGGGCTAAACATATCAAGGTGAAGTTTGGTACCCTGCTCCAGAGGCCAGACCATGAACACACTGAGAACGTCATCCCCTTTCAGAAGAAACCTGAGAACGTAATCCCCTTTCAGAAGAAACCTGAGAATGCCATCCCTCTTCCACAGAAACCTGAGAGATGTCTGGAGACGCCTCCGAAGTATGACAGACCATCAAGAGCGGAAGCATCACAGTGGGGGAAGGCCCTGGACAATGTACTGACCAACAACTATGGCCTGGCTACTTTCAGGGGCTTCCTGAGGTCAGAGTTCAGCGAGGAGAACATTGAGTTCTGGGTAGCCTGTGAGGACTACAAGAGGACCAGAGAAACAAGCAAAATGGCAGCCAAGGCTAAGAGGATTTATAAGGAGTTTATACAGACCGGGGCCCAGTGGGAGGTGAACATTGACCACATCACCAAGGACGTAACAGTAAGGAACTTGGGCCGACTGACTCCTATGACCTTTGACCTAGCCCAGAGACAGGTCTTCGCCCTCATGGAGAAAGATTCGTACAGGAGGTTCCTCAAATCCAACCAATACCAGGAGATTATAAAGTAGAAATTCAAACACTGATTGGCTAGAGTCGTGCCATCAGACTGATTGGTTggtggattgattgattgacttgaTTTATCAATCATGTCATCGGACTGATTGGAGGGTTCGTTGGGTAAATGACTGATTTATTGATTGGTCTGTTAGTCATTTTTTGGAATCTGATATATAAATTACACACCAGCACCTATTTACCTGAACCATTATTCAACTGATACAGTATCTAAAGGAAATaaatattacactttttttttaagtCTTAATTTTAGCACTGCAATGTATAAATGAATACTTCAGAAATATGacgaagagtgtgtgtgtggtttgaggAAGGATGGGGAGACAATGCAGTGACAACACAAGTTAACCACTATTCACATAACTAGCTATGCACACCACCAACAGATGATATAGTGAGGACATCAGAGCTTTACCTGACATGCAGGACACACCTCTGAAAATAGAAAGtgttttcattcattcattctatTCATTCAATCtgcaataataaaaaaaaacatgtcaagcTACGTAA

Function

NR:

description
regulator of G-protein signaling 5-like

GO:

id name namespace
GO:0043547 positive regulation of GTPase activity biological_process
GO:0005886 plasma membrane cellular_component
GO:0005737 cytoplasm cellular_component
GO:0005096 GTPase activator activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021589967.2 True 1302 mRNA 0.43 5 33156641 33165714

Neighbor

gene id symbol gene type direction distance location
LOC110509025 LOC106598617 coding upstream 29664 33124472 ~ 33126977 (+)
LOC110509024 LOC106598521 coding upstream 86234 33050612 ~ 33070407 (+)
LOC110509022 b3galt2 coding upstream 244709 32872931 ~ 32911932 (+)
LOC110508224 kcnt2 coding upstream 320203 32814704 ~ 32836798 (+)
zbtb41 zbtb41 coding upstream 372352 32759166 ~ 32803922 (+)
LOC110508226 LOC106598614 coding downstream 11038 33176752 ~ 33212483 (+)
LOC118944857 LOC106568727 coding downstream 65808 33231522 ~ 33247262 (+)
LOC110509029 LOC106598504 coding downstream 82936 33248650 ~ 33274764 (+)
LOC118944861 NA coding downstream 347858 33513572 ~ 33520317 (+)
LOC110509035 LOC106598436 coding downstream 360970 33526684 ~ 33552442 (+)
G2129552 NA non-coding upstream 1842 33154558 ~ 33154799 (+)
G2129530 NA non-coding upstream 50206 33105976 ~ 33106435 (+)
G2129522 NA non-coding upstream 63994 33091151 ~ 33092647 (+)
G2129429 rgs1 non-coding upstream 199264 32954952 ~ 32957377 (+)
G2129411 trove2 non-coding upstream 226018 32930072 ~ 32930623 (+)
G2129559 NA non-coding downstream 404 33166118 ~ 33166591 (+)
G2129574 NA non-coding downstream 24284 33189998 ~ 33190204 (+)
G2129576 NA non-coding downstream 33692 33199406 ~ 33199752 (+)
G2129564 NA non-coding downstream 47000 33212714 ~ 33213948 (+)
G2129371 crb1 other upstream 407073 32748928 ~ 32749568 (+)
pfn2l LOC106598797 other upstream 455797 32631289 ~ 32700844 (+)
G2128753 NA other upstream 882261 32269318 ~ 32274380 (+)
G2129639 LOC106598496 other downstream 142384 33308098 ~ 33308991 (+)
G2129708 NA other downstream 266037 33431751 ~ 33432107 (+)
G2129724 LOC106598452 other downstream 286498 33452212 ~ 33452873 (+)
G2129765 LOC106598425 other downstream 406394 33572108 ~ 33575970 (+)
G2129859 NA other downstream 563434 33729148 ~ 33729528 (+)

Expression


Co-expression Network