G2100024


Basic Information

Item Value
gene id G2100024
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 6975135 ~ 6975899 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2402063
tgtgtggtttcgaGGTGGAATTGCAACGTAAACATGCATGACtataaatgcaaaaaaaaaccATCATGATGTGTAAACTGAAATAACATAGATATTTAATTCAAGACTGGAACATTGATAAAATACAAAACACGTACAAatggtcacattcatacaatcAGAAAATGCATTTGAAATTTGGAACCTCATCGCAAACATGCTTTGAACAGTTTCCCAGGCAAGCTGTTAAAAGGGAGAAGCAGCCATTTTCCCCTAGTAATCGCATGTGACTTGCATTTAAAACTGGTACAGTTGAACTAGGGCAGGAGACCAACGGTATATGACTCTATGACTACACTTTGTAGATAAAACCTCTATAATTGCTTTATCTGACATCAACAGACTTCATCAACAGACTTCATCAACATTTGCAGAAAGCCTAGACCAACTAACACATTACAGATTTTAACCTACAGACAATGTACAGGCAGCATTTATATGACTACGGAGACAAAGGGCATTGGTAATGGATTTGTACAAAAGAAGCCATTTTGAAGTGCTCTGTTACCAAGATGGAATACTTCTATTCAATTTAGCATTCCCCTCTGTGTTCCATTTGACCCAATGAGTCATGAGAACACATAGCCTACCCAGACTTGTGTCTGTTCTATTAATTGTATTCATATGACTGCACACAGTTAGCGTTGCTGTCGAGCGtgtcatcacacacacaacacttcaGAGGTCTTCACGTTACAGTCCTACTTCAACCTTCCGCTTAGCACC
>TU2402064
tgtgtggtttcgaGGTGGAATTGCAACGTAAACATGCATGACtataaatgcaaaaaaaaaccATCATGATGTGTAAACTGAAATAACATAGATATTTAATTCAAGACTGGAACATTGATAAAATACAAAACACGTACAAatggtcacattcatacaatcAGAAAATGCATTTGAAATTTGGAACCTCATCGCAAACATGCTTTGAACAGTTTCCCAGGCAAGCTGTTAAAAGGGAGAAGCAGCCATTTTCCCCTAGTAATCGCATGTGACTTGCATTTAAAACTGGTACAGTTGAACTAGGGCAGGAGACCAACGGTATATGACTCTATGACTACACTTTGTAGATAAAACCTCTATAATTGCTTTATCTGACATCAACAGACTTCATCAACAGACTTCATCAACATTTGCAGAAAGCCTAGACCAACTAACACATTACAGATTTTAACCTACAGACAATGTACAGGCAGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2402063 False 765 lncRNA 0.39 1 6975135 6975899
TU2402064 True 472 lncRNA 0.37 1 6975428 6975899

Neighbor

gene id symbol gene type direction distance location
LOC110508405 LOC106599977 coding downstream 148517 6817234 ~ 6826618 (-)
LOC110508403 LOC106599971 coding downstream 175321 6752808 ~ 6799814 (-)
LOC118944892 NA coding downstream 270156 6704861 ~ 6704979 (-)
LOC118944895 NA coding downstream 294513 6680506 ~ 6680622 (-)
LOC110508402 LOC106600630 coding downstream 335997 6603175 ~ 6639138 (-)
LOC110508409 LOC106599985 coding upstream 9841 6985437 ~ 7016472 (-)
LOC110508412 NA coding upstream 63195 7039094 ~ 7052373 (-)
LOC110509205 LOC106599992 coding upstream 250408 7226307 ~ 7253057 (-)
LOC110508422 LOC106600004 coding upstream 435865 7411764 ~ 7504744 (-)
LOC110508425 LOC106600009 coding upstream 563290 7539189 ~ 7564681 (-)
G2100023 NA non-coding downstream 2933 6971948 ~ 6972202 (-)
G2100021 NA non-coding downstream 5194 6969720 ~ 6969941 (-)
G2100012 NA non-coding downstream 12531 6962503 ~ 6962604 (-)
G2100005 NA non-coding downstream 35044 6939849 ~ 6940091 (-)
G2100002 NA non-coding downstream 38437 6936396 ~ 6936698 (-)
G2100036 NA non-coding upstream 19067 6994966 ~ 7093519 (-)
G2100108 NA non-coding upstream 231569 7207468 ~ 7213518 (-)
G2100154 NA non-coding upstream 238848 7214747 ~ 7219258 (-)
G2100156 NA non-coding upstream 245389 7221288 ~ 7222126 (-)
G2099318 NA other downstream 536039 6426170 ~ 6439096 (-)
G2098997 NA other downstream 736522 6238169 ~ 6238613 (-)
G2098996 NA other downstream 737041 6237433 ~ 6238094 (-)
G2098793 NA other downstream 975641 5995825 ~ 5999494 (-)
G2098766 NA other downstream 1025522 5947738 ~ 5949613 (-)
G2100109 NA other upstream 227707 7203606 ~ 7206488 (-)
G2100707 NA other upstream 617395 7593294 ~ 7593815 (-)
LOC110508434 LOC106600027 other upstream 792517 7767544 ~ 7837267 (-)
LOC110508443 LOC106600051 other upstream 1017512 7993411 ~ 8044009 (-)
G2101243 NA other upstream 1182320 8158219 ~ 8158518 (-)

Expression


Co-expression Network