G2111488


Basic Information

Item Value
gene id G2111488
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 17750503 ~ 17750949 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2414671
ctggctGAGAGgcgctggactgagggcttgtaggcctattgAAAGGCAggccctcaccagacatcaccggcaacaacattgcctatgggcacaaaaccaccgtcgctggacaagacaggactggcaaaaagtgctcttcactgaggagtcatggttttgtctcaccaggggtgatagtcggattcgcgtttatcgtcgaaggaatgagcgttacaccggcGCCTGTACTCCggagagggatcgatttggaggtgtgtcacagcatcatcggactgagcttgtcgtcattgcaggcaatctcaacgctgtgcgttacagggaagacatcctcctccctcatgtggtacccctcctgcaggctcatcctgacatgaccctccagcatgacaatgccaccagccaaacTGCTCATTGTACGTgaattcctgcaagacaggaatgtcacag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2414671 True 447 lncRNA 0.54 1 17750503 17750949

Neighbor

gene id symbol gene type direction distance location
LOC110508652 LOC106599248 coding upstream 196516 17497781 ~ 17553987 (+)
LOC110508651 LOC106599247 coding upstream 261013 17480111 ~ 17489490 (+)
LOC110508649 LOC106599662 coding upstream 339840 17397397 ~ 17410663 (+)
LOC110508175 LOC106599673 coding upstream 513905 17196734 ~ 17236598 (+)
LOC110508645 LOC106599680 coding upstream 595561 17010525 ~ 17154942 (+)
LOC118944855 NA coding downstream 62900 17813849 ~ 17824722 (+)
LOC110508657 LOC106599258 coding downstream 116779 17867728 ~ 17986867 (+)
gs04 gs04 coding downstream 474363 18225312 ~ 18228390 (+)
LOC110508661 LOC106599266 coding downstream 565667 18316616 ~ 18354743 (+)
LOC110508663 LOC106599269 coding downstream 615140 18366089 ~ 18370884 (+)
G2111478 LOC106599252 non-coding upstream 11622 17738468 ~ 17738881 (+)
G2111476 NA non-coding upstream 16231 17733983 ~ 17734272 (+)
G2111473 LOC106599252 non-coding upstream 21196 17728911 ~ 17729307 (+)
G2111465 NA non-coding upstream 30442 17719762 ~ 17720061 (+)
G2111462 NA non-coding upstream 35458 17714766 ~ 17715045 (+)
G2111494 NA non-coding downstream 11060 17762009 ~ 17762453 (+)
G2111497 NA non-coding downstream 15402 17766351 ~ 17767416 (+)
G2112006 NA non-coding downstream 17883 17768832 ~ 17769083 (+)
G2112011 NA non-coding downstream 20938 17771887 ~ 17772137 (+)
G2112026 NA non-coding downstream 32125 17783074 ~ 17783504 (+)
G2111457 NA other upstream 41874 17708256 ~ 17708629 (+)
G2111300 NA other upstream 334271 17411144 ~ 17416232 (+)
G2111044 NA other upstream 791651 16953784 ~ 16958852 (+)
LOC110508278 LOC106599701 other upstream 937707 16809471 ~ 16813125 (+)
G2110507 LOC107717027 other upstream 1302001 16448112 ~ 16448502 (+)
G2111491 NA other downstream 3988 17754937 ~ 17755581 (+)
G2112127 NA other downstream 152249 17903198 ~ 17903924 (+)
G2113059 NA other downstream 916166 18667115 ~ 18668496 (+)
G2113578 NA other downstream 1325128 19076077 ~ 19076418 (+)
LOC110508695 LOC106599333 other downstream 1872519 19623468 ~ 19636825 (+)

Expression


Co-expression Network