G2125614 (LOC106599059)


Basic Information

Item Value
gene id G2125614
gene name LOC106599059
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 29320743 ~ 29323384 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2430337
TTGTCTTTAATCACATTCCATATTTTGAAGCAGTTTCTGGCAAGACTAACTCTGCAAAATCATCTAAATAATCATTGCACAAATGACACTTCATGTGTACAGTACATCTGTGAGAGATTTTAAGAGTGCTGGGATCATTCATGGGCACAAATATTAATAGAATAAactaaaataataaaacaatacaaataataAGCCTAACCATAATAATAATCATTACCATAATCATCATCCCACTTGAGACCACTGGTATTATCAGGGGAACTGAAAGGTTGTGCCAGAGACATTCTATTGAGCCCTATGCCTGACAGGACTCAGTGCCAGTTGGTCTTGCACAGACAACAGTTCTTCCTGCCCACGGTTTCTCTTTGAGAGATGTCAATAGTGGTTTGATCATTAGTGCGCACAGGATAGCAAAATAGTTTTACTTCCTGTTGTTCCTCAAGCCAAAATGGCATTTAATAAAACTCTGGGCCTGTTTTTGAGACTTGAACtcaatttttttccccccatattccatccaaGGATGGGTAGGGTATGGGTTGTACTTTATATGCCTCTTGAAAACTTCTGCTACGAGATCCTTTTTATTCATGTGCCAAACTCTGAAGCAGTTTCTGTCTGGTATCATACAGAGTGCTACCTGACAGGACTCACACTGCCAGTTGGTCTGGCTTTCCTTGCACAGACAACATTTCTTCCTGCCGCTAGATTTTCTTTGAGAGGAGTCAACAGTGGTAGGATCAATTATGGGTACAGGGTAGCATGGTCGCTTCACTTCCACCaattccttctcttcttctggttgttcttcttcctcctcctcctcctcctctgaagaCTCTTCTTCAGCCTCCTCCTGCTTACCAATGTCAGCAAGCTGCAGGCACAGCTGCTCCCTGAACTGCTTGTGGGTCATGGGCTTTTTCTTCTTCATCTGGGCCATGTCCTTCTGCAGGAGGAAGCtgttcaccacagcaatgtctaTAAAGTGGAAGAAGAAGGTCTTGTACCACTTCATGGTTTTGTGGGCCACACTGTAGCATTTGATAAGGGAATCAGACAGGTCCACACCCCCCATATACTTGTTGTACGGCTTGATTGCCTCTGGGACGGGTATGCACTGTGTTGTCCAGGATCCATTTTTGCTCTGTTTCCTGATTTTGACCTGCTCCCCTGCGAATGCCTTATGAATGGTGGTACACATGGTGACTGGTTGTGCGCCCATCCACTTGGTGAAGAGCAGCTCCCCATCACGGAGCCAGCGGATGGTTCCCTTCTCTGCTCGAGCAGGCATGCTGTTCTCTCGGATGCCCACACGGAATTCACGTATGGTTCCGCATGCTCCCAATTTCTTTTTGTACAGGTCACGGAAGAAAGTTGTGCTGGTGAAGAAGTTATCAACATAAATGTGGTATCCTGTGCCCAAGTAAGGCACCTTCAATAGGTTCATGGCAACATCATAGCTCTCCCCTTTGCCTGAAGCAGATGGGTTTTTGGTCATAAAGACAATGAAGTCGCACGTGTAGCCATTTCTTGAATCTGCTAAAACATACAGCTTGAATCCATACCTGTAGGACTTGGATTTAATGTATTGTTTGAGGCTGTGGCGGGCCTTGGAGTGCACCATGCGCTCATCAATGGAAAGGTTCTGGAATGGGTGGTAGAAGGCCCTGCATGCATCCAAAATCTGGTCTTTTAGAGGTTTGATTCTCATGAGCCGATCATAGTCCGCAGTCCCCTTCTTCTTGTCGTTTTCCTCATCCTCTGCTGGGTCACTCATGTGCAGTGAATAGGTGATTGCCCTAAATCTTGTCATAGTCATGACTGTACAACAAAAAGGAAGGCAATATATTCTGTTTCGATTCCAGTAGTCTGATACAGTGTGTACATTCAGCAGACCCATATAGATTACAATGCTGAGGTATTTGTACATTTCCTCCACAGATACAGGTTTCCATGGTTCTTTGATTCCATGTTCTTGTCTTCTCTTGGCATTCTTGTTGGTGTTTGAGCAGAGTGTATCAACAACAGCATTACTGAAGAAGAGCTGGAAGAGCTCTAGAACAGTGTAGTTCTTTGAAGTGTCTAGCTGGGGTCCAGGAGTCCTAGCTGGTTCGAAAGGTAACCATTTATGCTCTTGGTCTGGTTCATCCTCAGTCCTCCACTTCctctctgaccCTGCTTTGGGGCTAGAGGTCAGTTTTGTTCTTTTTGAAGCCCTGCTCTCGATTACTTCTGTATCAGGGGGAAGGTCTTCTCCATCTTCCTCACTTGACTCTGAAGCTTCGATCTTAGGGCGAGAGGAGATGCCCCTTACCCTGAGCCGTGTCATAATTGGAGGAGAGTCATCTCCCCCTCTAGTCTCTGTAACTTCTGTCCCATCTGGAGGGTATTCATCCTCCACTATAGTCTCTGTAACTTCTGTTCCATTGGGAGGGGATTCTTCCCCCTCCATAGCCTCTGAAGGTTCCGTCAGATAAGGAAGGTCTTCA

Function

NR:

description
piggyBac transposable element-derived protein 4-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2430337 True 2495 TUCP 0.45 3 29320743 29323384

Neighbor

gene id symbol gene type direction distance location
LOC110508882 LOC106599064 coding upstream 37589 29276406 ~ 29283154 (+)
LOC110508880 NA coding upstream 46289 29270737 ~ 29274454 (+)
LOC110508878 LOC106599189 coding upstream 64787 29246463 ~ 29255956 (+)
LOC118944852 NA coding upstream 88030 29228845 ~ 29233301 (+)
LOC110508872 LOC106599074 coding upstream 141846 29176760 ~ 29178897 (+)
LOC110508889 LOC106599045 coding downstream 86938 29410322 ~ 29661754 (+)
LOC110508893 marh2 coding downstream 550105 29873489 ~ 29877319 (+)
LOC110508895 LOC106599036 coding downstream 564619 29888003 ~ 29893380 (+)
LOC110508896 NA coding downstream 580956 29904340 ~ 29906026 (+)
LOC118944851 NA coding downstream 591446 29914830 ~ 29921206 (+)
G2125596 LOC106599063 non-coding upstream 18901 29300433 ~ 29301842 (+)
G2125595 NA non-coding upstream 24935 29295592 ~ 29295808 (+)
G2125560 LOC106599070 non-coding upstream 51319 29265047 ~ 29269424 (+)
G2125513 NA non-coding upstream 82323 29233625 ~ 29238420 (+)
G2125615 NA non-coding downstream 314 29323698 ~ 29324403 (+)
G2125617 NA non-coding downstream 1827 29325211 ~ 29325896 (+)
G2125621 NA non-coding downstream 2925 29326309 ~ 29326657 (+)
G2125623 NA non-coding downstream 6659 29330043 ~ 29330496 (+)
G2125624 NA non-coding downstream 7211 29330595 ~ 29330948 (+)
LOC110508851 LOC106599130 other upstream 782331 28522217 ~ 28551515 (+)
LOC110508827 LOC106599210 other upstream 1596755 27720549 ~ 27725061 (+)
G2123170 NA other upstream 2211461 27106034 ~ 27109282 (+)
G2123174 NA other upstream 2216473 27101312 ~ 27104270 (+)
G2126497 NA other downstream 886863 30210247 ~ 30211633 (+)
kcnn1a LOC106598974 other downstream 1211467 30534338 ~ 30592397 (+)
G2127299 LOC106598972 other downstream 1317303 30640687 ~ 30641243 (+)
LOC110508221 LOC106598877 other downstream 2316918 31594783 ~ 31643462 (+)
G2128189 NA other downstream 2415928 31739312 ~ 31740070 (+)

Expression


Co-expression Network