G2161635 (LOC106563312)


Basic Information

Item Value
gene id G2161635
gene name LOC106563312
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 19741814 ~ 19752743 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2471217
GATTGGGCAAAGACACAGATTAATTCAACTGGACACAaatctttttatttttaaactgcCAGCTTCCAACAGTAGTTAAGCATAAAACATTTTAACAATAATTCCAAACTCCATGTGAAATGATACCTGTGTGGATTCCTATCCTTAGCCGTAGCTGGTCTTGGGGTCTGTGTCGAATCTTGAATGTTTTCACCTGTTCTAGTAAGGCTAATGACATCCCAGCGATCTCTCTTGCGTGGAGTTTACCATTCCTTACCGGAAGCCCTGACACCACCATGTACGCATCACCAATGGTCTCCACCTTGTACACATCAAAATTATCGATGATGGCATCAAAGCAGGTGTAAAGATCATTCAGCACCGTCACAACCTGCAGTGGTGTACTCTCAGCTGACATTGATGTGAAGCCCACAATGTCACTGAAGTAGATTGTCACACTGTCAAATGCCTCCGCTTGGACCGTCTCCCCTCGCTTTAGCTGCTCTGCTACTGAGTGTGGCAAGATCTGGTAAAGTAGATTTTCGGcttttctcttctcctccaggTAGGCTTGCGTTCGTTCCTCTACCAGGTTCTCCAGGTTGTTGGCGTACTGCTCCATCCTGGACAGCAGGTTGTTCAGAATGCTTGTACTTCCCTCCTTGTTGAGTTTGGTGATGTAGATCTTGATATGGCTAAAGTCAGGCCGCTCGACGGGGTCCTCGGCCCAGCAGCTGTCCATCAGGATGGTCAGCTCCTCACAGTGGCAGCTGTTGTCTGTGGTGGGCCGGAAGTAAGGCTTCTGGCCGTTACGCACCTTCTGCACTATCTCTTTGGGGCTCAGATCCATGCCGTCCACATAGAAGGGTCCATTCCTCAAGGCTATCTCCTGGAGTATGATGCCAAAGCTGTACACGTCTCCTTTCTGGGTGCCCTGTGGAGGGTGTCTGTCGTAGATCAACAACTCAGGGGCCGTC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2471217 True 956 TUCP 0.49 6 19741814 19752743

Neighbor

gene id symbol gene type direction distance location
LOC100136690 LOC100136690 coding upstream 65401 19673166 ~ 19676413 (+)
slc30a5 slc30a5 coding upstream 69507 19666183 ~ 19672307 (+)
LOC110509340 LOC106563366 coding upstream 81813 19651752 ~ 19660001 (+)
LOC110509767 LOC105015049 coding upstream 96846 19630925 ~ 19644968 (+)
LOC118936421 smc5 coding upstream 109963 19628508 ~ 19631851 (+)
LOC110509364 LOC106563314 coding downstream 52619 19805362 ~ 19806854 (+)
LOC110509774 LOC106563307 coding downstream 86923 19839666 ~ 19844815 (+)
LOC110509777 NA coding downstream 94280 19847023 ~ 19849150 (+)
fbxw5 LOC106563306 coding downstream 107650 19860393 ~ 19873346 (+)
LOC118936353 NA coding downstream 152041 19904784 ~ 19908478 (+)
G2161601 NA non-coding upstream 52668 19688873 ~ 19689146 (+)
G2161600 NA non-coding upstream 53976 19687501 ~ 19687838 (+)
G2161585 NA non-coding upstream 80083 19661528 ~ 19661731 (+)
G2161568 NA non-coding upstream 123398 19616722 ~ 19618416 (+)
G2161656 NA non-coding downstream 36156 19788899 ~ 19789132 (+)
G2161679 NA non-coding downstream 45347 19798090 ~ 19799509 (+)
G2161680 NA non-coding downstream 46902 19799645 ~ 19800262 (+)
G2161705 NA non-coding downstream 104867 19857610 ~ 19857903 (+)
LOC110509766 LOC106566689 other upstream 125303 19609602 ~ 19616511 (+)
LOC110509753 LOC106563373 other upstream 604246 19136428 ~ 19138160 (+)
LOC118945267 NA other upstream 673030 19066137 ~ 19068784 (+)
LOC110509751 LOC106563328 other upstream 676042 18962089 ~ 19065920 (+)
G2158499 LOC106563144 other upstream 2550686 17189344 ~ 17191128 (+)
G2161678 NA other downstream 42517 19795260 ~ 19797774 (+)
LOC110509811 LOC106563272 other downstream 1445175 21160126 ~ 21389662 (+)
G2163804 LOC106613263 other downstream 1847675 21600418 ~ 21601052 (+)
G2165628 LOC106563266 other downstream 3084328 22837071 ~ 22841481 (+)
G2165973 LOC106563265 other downstream 3373037 23125780 ~ 23134290 (+)

Expression


Co-expression Network