Gene
RNA
| Item | Value |
|---|---|
| gene id | G2166066 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 23260168 ~ 23261360 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2475909 | True | 191 | lncRNA | 0.55 | 2 | 23260168 | 23261360 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| trim32 | LOC106563269 | coding | upstream | 1269927 | 21985765 ~ 21990241 (+) |
| LOC118945260 | NA | coding | upstream | 1285188 | 21963673 ~ 21974980 (+) |
| pappaa | LOC106563270 | coding | upstream | 1385097 | 21749280 ~ 21875071 (+) |
| LOC110509813 | LOC106563271 | coding | upstream | 1551211 | 21670528 ~ 21708957 (+) |
| LOC110509811 | LOC106563272 | coding | upstream | 1870506 | 21160126 ~ 21389662 (+) |
| LOC110509823 | LOC106563263 | coding | downstream | 50276 | 23311636 ~ 23325364 (+) |
| LOC118945326 | NA | coding | downstream | 118545 | 23379905 ~ 23382422 (+) |
| LOC110509824 | LOC106563262 | coding | downstream | 144643 | 23406003 ~ 23408940 (+) |
| LOC110509825 | LOC106563261 | coding | downstream | 150182 | 23399671 ~ 23465618 (+) |
| LOC110509345 | LOC106563260 | coding | downstream | 207040 | 23468400 ~ 23534217 (+) |
| G2166020 | NA | non-coding | upstream | 63283 | 23193035 ~ 23196885 (+) |
| G2166007 | NA | non-coding | upstream | 68227 | 23181983 ~ 23191941 (+) |
| G2166008 | NA | non-coding | upstream | 78458 | 23160072 ~ 23181710 (+) |
| G2165972 | NA | non-coding | upstream | 134560 | 23123195 ~ 23125608 (+) |
| G2165617 | NA | non-coding | upstream | 431146 | 22828800 ~ 22829022 (+) |
| G2166030 | NA | non-coding | downstream | 6520 | 23267880 ~ 23361214 (+) |
| G2166339 | NA | non-coding | downstream | 110740 | 23372100 ~ 23372305 (+) |
| G2166344 | NA | non-coding | downstream | 119291 | 23380651 ~ 23380947 (+) |
| G2165973 | LOC106563265 | other | upstream | 125878 | 23125780 ~ 23134290 (+) |
| G2165628 | LOC106563266 | other | upstream | 418687 | 22837071 ~ 22841481 (+) |
| G2163804 | LOC106613263 | other | upstream | 1659116 | 21600418 ~ 21601052 (+) |
| G2161678 | NA | other | upstream | 3462394 | 19795260 ~ 19797774 (+) |
| LOC110509837 | LOC106563250 | other | downstream | 524259 | 23785060 ~ 23793640 (+) |
| LOC110509859 | LOC106563234 | other | downstream | 1239048 | 24500361 ~ 24532163 (+) |
| LOC110509866 | LOC106563223 | other | downstream | 1938259 | 24944825 ~ 25202836 (+) |
| LOC110509876 | LOC106563358 | other | downstream | 3201941 | 26463263 ~ 26464615 (+) |
