Gene
RNA
| Item | Value |
|---|---|
| gene id | G2166339 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 23372100 ~ 23372305 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2476192 | True | 206 | lncRNA | 0.33 | 1 | 23372100 | 23372305 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509823 | LOC106563263 | coding | upstream | 46736 | 23311636 ~ 23325364 (+) |
| trim32 | LOC106563269 | coding | upstream | 1381859 | 21985765 ~ 21990241 (+) |
| LOC118945260 | NA | coding | upstream | 1397120 | 21963673 ~ 21974980 (+) |
| pappaa | LOC106563270 | coding | upstream | 1497029 | 21749280 ~ 21875071 (+) |
| LOC110509813 | LOC106563271 | coding | upstream | 1663143 | 21670528 ~ 21708957 (+) |
| LOC118945326 | NA | coding | downstream | 7600 | 23379905 ~ 23382422 (+) |
| LOC110509824 | LOC106563262 | coding | downstream | 33698 | 23406003 ~ 23408940 (+) |
| LOC110509825 | LOC106563261 | coding | downstream | 39237 | 23399671 ~ 23465618 (+) |
| LOC110509345 | LOC106563260 | coding | downstream | 96095 | 23468400 ~ 23534217 (+) |
| LOC110509828 | LOC106563258 | coding | downstream | 182627 | 23554932 ~ 23569102 (+) |
| G2166030 | NA | non-coding | upstream | 10886 | 23267880 ~ 23361214 (+) |
| G2166066 | NA | non-coding | upstream | 110740 | 23260168 ~ 23261360 (+) |
| G2166020 | NA | non-coding | upstream | 175215 | 23193035 ~ 23196885 (+) |
| G2166007 | NA | non-coding | upstream | 180159 | 23181983 ~ 23191941 (+) |
| G2166008 | NA | non-coding | upstream | 190390 | 23160072 ~ 23181710 (+) |
| G2166344 | NA | non-coding | downstream | 8346 | 23380651 ~ 23380947 (+) |
| LOC110509829 | LOC106563257 | non-coding | downstream | 270427 | 23599442 ~ 23647056 (+) |
| G2166463 | NA | non-coding | downstream | 286819 | 23659124 ~ 23659329 (+) |
| G2165973 | LOC106563265 | other | upstream | 237810 | 23125780 ~ 23134290 (+) |
| G2165628 | LOC106563266 | other | upstream | 530619 | 22837071 ~ 22841481 (+) |
| G2163804 | LOC106613263 | other | upstream | 1771048 | 21600418 ~ 21601052 (+) |
| LOC110509811 | LOC106563272 | other | upstream | 2150919 | 21160126 ~ 21389662 (+) |
| G2161678 | NA | other | upstream | 3574326 | 19795260 ~ 19797774 (+) |
| LOC110509837 | LOC106563250 | other | downstream | 413314 | 23785060 ~ 23793640 (+) |
| LOC110509859 | LOC106563234 | other | downstream | 1128103 | 24500361 ~ 24532163 (+) |
| LOC110509866 | LOC106563223 | other | downstream | 1827314 | 24944825 ~ 25202836 (+) |
| LOC110509876 | LOC106563358 | other | downstream | 3090996 | 26463263 ~ 26464615 (+) |
