G2177111


Basic Information

Item Value
gene id G2177111
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 33766257 ~ 33767302 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2488497
gtcctactgtatgtgttgtaattacagagtcctactgtatgtgttgtaattagagaggtctactgtatgtgttgtaattagaggcctactgtacatgttgtaattacagagtcctactgtatgtgttgtaattagaggccgacactttgttgtaattacagaggcctactgtatgtgttgtaattacagagtcctactctatgtgttgtaattacagagtcctactgtatgtgttgtaattagacgcctactgtatgtgttgtaattacagagttctactgtatgtgttgtaattagacgcctactgtatgtgttgtaattagagaggcctactgtatgtgttgtaattacagaggcctactgtatgtgttgtaattagagaggcctactgtatgtgttgtaattagaggcctactgtatgtgttgtaattagaggtacAGAGAGTTACtgcatgtgttgtaattagaggtacagagtgctactgtatgtgttgtaattagaggcctactgtatgtgttgtaattacagaggcttactgtatgtgttgtaattacagagtcctactgtatgtgttgtaattacagagtcctactgtatgtcttgtaatagagacctactgtatgtgttgtaattagacgcctactgtatgtgttgtaattacagagttctactctatgtgttgtaattacagagtcctactgtatgtgttgtaattagagaggcctactgtatgtgttgtaattacagagtcctactgtatgtgttgtaattagagaggtctactgtatgtgttgtaattagagaggcctactgtatgtgttgtaattacagagtcctactgtgttgtaattagaggcctactgtatgtgttgtaattacagagtcctactgtatgtgttgtaattagaggcctactgtatgtgttgtaattagaggccgacactgtgttgtaattacagaggcctactgtatgtgttgtaattacagagtcctactgtatgtcttgtaattagagacctactgtatgtgttgtaattagacgcct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2488497 True 1046 lncRNA 0.37 1 33766257 33767302

Neighbor

gene id symbol gene type direction distance location
rasgrp2 grp2 coding upstream 92090 33661997 ~ 33674167 (+)
LOC110510121 NA coding upstream 130869 33627367 ~ 33635388 (+)
epdl2 LOC106563665 coding upstream 152158 33611933 ~ 33614099 (+)
nrg2a LOC106563662 coding upstream 171501 33436489 ~ 33594756 (+)
cxxc5a LOC106563628 coding upstream 530839 33212994 ~ 33235535 (+)
LOC110510124 LOC106602987 coding downstream 78533 33845835 ~ 34089064 (+)
LOC110510125 LOC106563697 coding downstream 338619 34105921 ~ 34135553 (+)
cfbl cfb coding downstream 378101 34145403 ~ 34155439 (+)
bbs1 bbs1 coding downstream 389407 34156709 ~ 34163950 (+)
pacs1a LOC106563701 coding downstream 411529 34178831 ~ 34195217 (+)
G2177098 NA non-coding upstream 21354 33744673 ~ 33744903 (+)
G2177095 NA non-coding upstream 23148 33742905 ~ 33743109 (+)
LOC118945288 LOC106563664 non-coding upstream 25722 33675566 ~ 33814591 (+)
G2177092 NA non-coding upstream 29780 33734868 ~ 33736477 (+)
G2177052 NA non-coding upstream 111490 33654149 ~ 33654767 (+)
G2177112 NA non-coding downstream 443 33767745 ~ 33769208 (+)
G2177116 NA non-coding downstream 11368 33778670 ~ 33782010 (+)
G2177119 NA non-coding downstream 16804 33784106 ~ 33788760 (+)
G2177123 NA non-coding downstream 24383 33791685 ~ 33791908 (+)
G2177126 NA non-coding downstream 43997 33811299 ~ 33811498 (+)
LOC110509425 LOC106563572 other upstream 1640179 32115629 ~ 32150579 (+)
G2175413 NA other upstream 1728521 32037047 ~ 32037736 (+)
LOC110509422 LOC106563560 other upstream 1865021 31820484 ~ 31908546 (+)
G2175233 psmb6 other upstream 2154788 31610544 ~ 31611469 (+)
LOC110510132 rin1 other downstream 464354 34227307 ~ 34236487 (+)
G2177424 NA other downstream 592322 34359624 ~ 34460769 (+)
LOC110510159 LOC106563679 other downstream 1035637 34784319 ~ 34825545 (+)
ndufa2 ndua2 other downstream 1738546 35505848 ~ 35507048 (+)

Expression


Co-expression Network