Gene
RNA
| Item | Value |
|---|---|
| gene id | G2177340 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 34196332 ~ 34196814 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2488756 | True | 218 | lncRNA | 0.45 | 2 | 34196332 | 34196814 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pacs1a | LOC106563701 | coding | upstream | 1115 | 34178831 ~ 34195217 (+) |
| bbs1 | bbs1 | coding | upstream | 32382 | 34156709 ~ 34163950 (+) |
| cfbl | cfb | coding | upstream | 40893 | 34145403 ~ 34155439 (+) |
| LOC110510125 | LOC106563697 | coding | upstream | 60779 | 34105921 ~ 34135553 (+) |
| LOC110510124 | LOC106602987 | coding | upstream | 107268 | 33845835 ~ 34089064 (+) |
| LOC110510132 | rin1 | coding | downstream | 30493 | 34227307 ~ 34236487 (+) |
| LOC110510134 | LOC106563705 | coding | downstream | 82798 | 34279612 ~ 34290554 (+) |
| LOC110509380 | NA | coding | downstream | 103071 | 34299885 ~ 34303347 (+) |
| LOC110510136 | LOC106602966 | coding | downstream | 132367 | 34329181 ~ 34335741 (+) |
| LOC118945289 | NA | coding | downstream | 197176 | 34393990 ~ 34397166 (+) |
| G2177301 | NA | non-coding | upstream | 100344 | 34084804 ~ 34095988 (+) |
| G2177149 | NA | non-coding | upstream | 346853 | 33849088 ~ 33849479 (+) |
| G2177134 | NA | non-coding | upstream | 373702 | 33822402 ~ 33822630 (+) |
| G2177132 | NA | non-coding | upstream | 375130 | 33820931 ~ 33821202 (+) |
| G2177128 | NA | non-coding | upstream | 382771 | 33813354 ~ 33813561 (+) |
| G2177365 | NA | non-coding | downstream | 53880 | 34250694 ~ 34250973 (+) |
| G2177367 | NA | non-coding | downstream | 55367 | 34252181 ~ 34252783 (+) |
| G2177368 | NA | non-coding | downstream | 56012 | 34252826 ~ 34253102 (+) |
| G2177371 | NA | non-coding | downstream | 60167 | 34256981 ~ 34257207 (+) |
| cxxc5a | LOC106563628 | other | upstream | 960797 | 33212994 ~ 33235535 (+) |
| LOC110509425 | LOC106563572 | other | upstream | 2070254 | 32115629 ~ 32150579 (+) |
| G2175413 | NA | other | upstream | 2158596 | 32037047 ~ 32037736 (+) |
| LOC110509422 | LOC106563560 | other | upstream | 2295096 | 31820484 ~ 31908546 (+) |
| G2177424 | NA | other | downstream | 162810 | 34359624 ~ 34460769 (+) |
| LOC110510159 | LOC106563679 | other | downstream | 606125 | 34784319 ~ 34825545 (+) |
| ndufa2 | ndua2 | other | downstream | 1309034 | 35505848 ~ 35507048 (+) |
| G2179418 | NA | other | downstream | 1654840 | 35851654 ~ 35856462 (+) |
