G2177132


Basic Information

Item Value
gene id G2177132
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 33820931 ~ 33821202 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2488524
AGTGAACACAGTGtgcaaagaagggccagaagtatacagaatggtgtcgtctgcgtagaggtggatcagagaatcaccagcagcaagagcgacatcattgatgtatacagagaagagagtcggcctgagaatttaaccctgtggcacccccatagagactgccagagatccggaCAAAAGGCCCTCGACTTGACACCAGAAAGTgacgttagctgatgaagatattctcatagaacaaaacgtataagatctcctaagcctgtgtttaccac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2488524 True 272 lncRNA 0.47 1 33820931 33821202

Neighbor

gene id symbol gene type direction distance location
LOC118945288 LOC106563664 coding upstream 6340 33675566 ~ 33814591 (+)
rasgrp2 grp2 coding upstream 146764 33661997 ~ 33674167 (+)
LOC110510121 NA coding upstream 185543 33627367 ~ 33635388 (+)
epdl2 LOC106563665 coding upstream 206832 33611933 ~ 33614099 (+)
nrg2a LOC106563662 coding upstream 226175 33436489 ~ 33594756 (+)
LOC110510124 LOC106602987 coding downstream 24633 33845835 ~ 34089064 (+)
LOC110510125 LOC106563697 coding downstream 284719 34105921 ~ 34135553 (+)
cfbl cfb coding downstream 324201 34145403 ~ 34155439 (+)
bbs1 bbs1 coding downstream 335507 34156709 ~ 34163950 (+)
pacs1a LOC106563701 coding downstream 357629 34178831 ~ 34195217 (+)
G2177128 NA non-coding upstream 7370 33813354 ~ 33813561 (+)
G2177126 NA non-coding upstream 9433 33811299 ~ 33811498 (+)
G2177123 NA non-coding upstream 29023 33791685 ~ 33791908 (+)
G2177119 NA non-coding upstream 32171 33784106 ~ 33788760 (+)
G2177116 NA non-coding upstream 38921 33778670 ~ 33782010 (+)
G2177134 NA non-coding downstream 1200 33822402 ~ 33822630 (+)
G2177149 NA non-coding downstream 27886 33849088 ~ 33849479 (+)
G2177301 NA non-coding downstream 263602 34084804 ~ 34095988 (+)
G2177340 NA non-coding downstream 375130 34196332 ~ 34196814 (+)
LOC110510132 rin1 non-coding downstream 414485 34227307 ~ 34236487 (+)
cxxc5a LOC106563628 other upstream 585396 33212994 ~ 33235535 (+)
LOC110509425 LOC106563572 other upstream 1694853 32115629 ~ 32150579 (+)
G2175413 NA other upstream 1783195 32037047 ~ 32037736 (+)
LOC110509422 LOC106563560 other upstream 1919695 31820484 ~ 31908546 (+)
G2175233 psmb6 other upstream 2209462 31610544 ~ 31611469 (+)
G2177424 NA other downstream 538422 34359624 ~ 34460769 (+)
LOC110510159 LOC106563679 other downstream 981737 34784319 ~ 34825545 (+)
ndufa2 ndua2 other downstream 1684646 35505848 ~ 35507048 (+)

Expression


Co-expression Network