Gene
RNA
| Item | Value |
|---|---|
| gene id | G2180720 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 37249673 ~ 37250305 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2492618 | True | 377 | lncRNA | 0.46 | 2 | 37249673 | 37250305 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cd74b | LOC100136155 | coding | upstream | 14375 | 37232336 ~ 37235298 (+) |
| rs14 | LOC100194652 | coding | upstream | 29165 | 37217544 ~ 37220508 (+) |
| LOC110510194 | LOC106563726 | coding | upstream | 38665 | 37073927 ~ 37211008 (+) |
| LOC110510196 | LOC106563728 | coding | upstream | 190161 | 37053673 ~ 37059512 (+) |
| arl3l1 | LOC106563754 | coding | upstream | 198044 | 37048213 ~ 37051629 (+) |
| LOC118945320 | NA | coding | downstream | 14454 | 37264759 ~ 37267070 (+) |
| LOC110510189 | LOC106563733 | coding | downstream | 20245 | 37270550 ~ 37276372 (+) |
| cdx1b | LOC106563735 | coding | downstream | 101684 | 37351989 ~ 37358604 (+) |
| trnaa-ugc-225 | NA | coding | downstream | 127914 | 37378219 ~ 37378294 (+) |
| LOC110509455 | LOC106563789 | coding | downstream | 222497 | 37472802 ~ 37479922 (+) |
| G2180706 | NA | non-coding | upstream | 26090 | 37223363 ~ 37223583 (+) |
| G2180705 | NA | non-coding | upstream | 26344 | 37222924 ~ 37223329 (+) |
| G2180691 | NA | non-coding | upstream | 37528 | 37211940 ~ 37212145 (+) |
| G2180670 | NA | non-coding | upstream | 83587 | 37165732 ~ 37166086 (+) |
| G2180724 | NA | non-coding | downstream | 7118 | 37257423 ~ 37257751 (+) |
| G2180727 | NA | non-coding | downstream | 18909 | 37269214 ~ 37269636 (+) |
| G2180746 | NA | non-coding | downstream | 49917 | 37300222 ~ 37304398 (+) |
| G2180747 | m-csfr | non-coding | downstream | 58626 | 37308931 ~ 37310069 (+) |
| G2180382 | NA | other | upstream | 207488 | 37041723 ~ 37042185 (+) |
| G2180378 | NA | other | upstream | 267059 | 36982346 ~ 36982614 (+) |
| G2180218 | LOC106563757 | other | upstream | 569376 | 36678571 ~ 36680297 (+) |
| G2179454 | LOC106602907 | other | upstream | 1324642 | 35912490 ~ 35925031 (+) |
| G2179418 | NA | other | upstream | 1393211 | 35851654 ~ 35856462 (+) |
| G2180811 | NA | other | downstream | 167112 | 37417417 ~ 37468092 (+) |
| G2180897 | NA | other | downstream | 410282 | 37660587 ~ 37662215 (+) |
| G2180928 | NA | other | downstream | 454843 | 37705148 ~ 37705729 (+) |
| G2181669 | NA | other | downstream | 923751 | 38174056 ~ 38184872 (+) |
| LOC110509461 | uspl1 | other | downstream | 1547252 | 38760853 ~ 38819031 (+) |
