LOC110521696 (LOC106584092)


Basic Information

Item Value
gene id LOC110521696
gene name LOC106584092
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 29710512 ~ 29737405 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021599475.2
tgtttctccctcttcctAACCCCTTCGCCCCGTTTCCTTTCCCCCCTACCACGTTTTCACACTGATGAGCATGCTGCGTGGCTCCTAGCCTCCTACTTACGGCAATTGTAATAGTAACAGCAGATATAATCGCCACACAAAAAGGAGTGCcatcacagacaaacacacactcacgcacacaccgACGTGGATAAATAGCGGCTTGTTCCTCTCAAACGTACGctggggaggaaaagagagaaagtGTCCACCTGCGCTGATCAAATACACAAGAGGGCTAAGAACCATGAAGACCAGACTAGGCTGCCTGTCCAATAAGTCTGACTCATACCCCGACTTCACTGAGTTCCTGCCCCCTTCCCAGGACAGGGCCACCAGAGGCCGAAAGCTGTCAAAAGATGAAGTCGTTCTGTGGGCAGATTCCTTCGATGTTCTTCTGTCTAACAAGTGTGGCCTGGCTGCCTTCCAGGCTTTTCTCCAGACGGAGTTCAGCGACGAGAACATTGAGTTCTGGATGGCCTGCGAGGAATATAAAAAAATCAAGACTCCCGCTAAATTGATGACCAAAATTAACAAGATCTACAATGAGTTTATTGATGTCAAGGCTCCCAGAGAGGTAAACATAGACTTCCGTACGCGGGAAGTGATGAGGCAGAGCCTTGCGGAGCCCACCCCCTCCAGTCTGAATGAGGTTCAGGCCAGGGTCCACAGCCTCATGGAGAAAGACTCTTACCCACGCTTTCTCCACTCCAAGATCTACCAGGACTTACTCGACATGCAGTACACACACTGCCATCGGAACTCTGTctgaagaacacacacacgtgccgtcgcagatacacacacacacacagttgtgttTTTCTTCAGTAGCTAGAACCCAAGGAACCATTATTCCTCAAGTTCTAACTTGAGATCTCAATGCGTAACTCAATAACTCACGATGACATGTTGAATCATGTGAACGTTTTTGAGTTATCCATACAAATATCAAGTTAGGATTCTCCTCTCACAGATTCTTAGTATTTAGACATATTGTGATATTGTATCATCCCTCTTAGAACTGTGTCAACATATAGTTTACACTTACAAAATACCACAAGACATTGTACTGTGTATCCTTTTATTACTCCTAATAGaaaatttgttgttgttgatgatatTTATTTCTCCCATCACTATAGATTTATCGTGGTGTAGAAATATGTCTGGCAATTTTATTAAAGTTTTGCAGCATGTCATCTGA
>XM_021599476.2
CTCCAGATGAAGCCACGGCCCGCCACTGACTACCATTGATCTAACCAGAGATGTTACACCCATCAGTGCTAAAATGTCTTTAAATGTCACAGGGCACGTAATTGGGAAGAAAGAGGAAACAGTTTGAAGCACTCAGAGCCTGTTATCAGTCGAATTACAGCAGGAGGAGAGTCATGATGAACCATGAAGACCAGACTAGGCTGCCTGTCCAATAAGTCTGACTCATACCCCGACTTCACTGAGTTCCTGCCCCCTTCCCAGGACAGGGCCACCAGAGGCCGAAAGCTGTCAAAAGATGAAGTCGTTCTGTGGGCAGATTCCTTCGATGTTCTTCTGTCTAACAAGTGTGGCCTGGCTGCCTTCCAGGCTTTTCTCCAGACGGAGTTCAGCGACGAGAACATTGAGTTCTGGATGGCCTGCGAGGAATATAAAAAAATCAAGACTCCCGCTAAATTGATGACCAAAATTAACAAGATCTACAATGAGTTTATTGATGTCAAGGCTCCCAGAGAGGTAAACATAGACTTCCGTACGCGGGAAGTGATGAGGCAGAGCCTTGCGGAGCCCACCCCCTCCAGTCTGAATGAGGTTCAGGCCAGGGTCCACAGCCTCATGGAGAAAGACTCTTACCCACGCTTTCTCCACTCCAAGATCTACCAGGACTTACTCGACATGCAGTACACACACTGCCATCGGAACTCTGTctgaagaacacacacacgtgccgtcgcagatacacacacacacacagttgtgttTTTCTTCAGTAGCTAGAACCCAAGGAACCATTATTCCTCAAGTTCTAACTTGAGATCTCAATGCGTAACTCAATAACTCACGATGACATGTTGAATCATGTGAACGTTTTTGAGTTATCCATACAAATATCAAGTTAGGATTCTCCTCTCACAGATTCTTAGTATTTAGACATATTGTGATATTGTATCATCCCTCTTAGAACTGTGTCAACATATAGTTTACACTTACAAAATACCACAAGACATTGTACTGTGTATCCTTTTATTACTCCTAATAGaaaatttgttgttgttgatgatatTTATTTCTCCCATCACTATAGATTTATCGTGGTGTAGAAATATGTCTGGCAATTTTATTAAAGTTTTGCAGCATGTCATCTGA

Function

NR:

description
regulator of G-protein signaling 8-like

GO:

id name namespace
GO:0043547 positive regulation of GTPase activity biological_process
GO:0038032 termination of G protein-coupled receptor signaling pathway biological_process
GO:0005886 plasma membrane cellular_component
GO:0005737 cytoplasm cellular_component
GO:0005096 GTPase activator activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021599475.2 False 1246 mRNA 0.45 5 29710512 29733452
XM_021599476.2 True 1143 mRNA 0.44 5 29710512 29737405

Neighbor

gene id symbol gene type direction distance location
LOC110521695 LOC106584091 coding downstream 37673 29670113 ~ 29672839 (-)
LOC110521694 LOC106584144 coding downstream 59118 29634764 ~ 29651394 (-)
LOC110521692 LOC106584141 coding downstream 153847 29322323 ~ 29556665 (-)
LOC110521690 LOC106584139 coding downstream 425964 29264130 ~ 29284548 (-)
LOC110521689 LOC106584138 coding downstream 447713 29216660 ~ 29262799 (-)
LOC110521697 LOC106584145 coding upstream 156397 29893802 ~ 29992077 (-)
LOC110521698 NA coding upstream 221648 29959053 ~ 29960875 (-)
LOC110521699 LOC106584146 coding upstream 731214 30468619 ~ 30537355 (-)
uchl5 LOC106584153 coding upstream 1149223 30886628 ~ 30901651 (-)
LOC118945813 NA coding upstream 1179439 30916844 ~ 30922903 (-)
G2221367 NA non-coding downstream 57165 29653042 ~ 29653347 (-)
G2221354 NA non-coding downstream 82519 29627583 ~ 29627993 (-)
G2221350 NA non-coding downstream 89825 29620386 ~ 29620687 (-)
G2221349 NA non-coding downstream 90612 29619638 ~ 29619900 (-)
G2221252 NA non-coding downstream 102906 29605762 ~ 29607606 (-)
G2221433 NA non-coding upstream 17056 29754461 ~ 29754671 (-)
G2221442 NA non-coding upstream 21336 29758741 ~ 29758959 (-)
G2221457 NA non-coding upstream 31249 29768654 ~ 29768993 (-)
G2221497 NA non-coding upstream 57527 29794932 ~ 29795170 (-)
G2221528 NA non-coding upstream 80553 29817958 ~ 29818273 (-)
G2221180 NA other downstream 236837 29468643 ~ 29473675 (-)
lnx1 lnx1 other downstream 1328237 28307617 ~ 28382340 (-)
G2219602 NA other downstream 1846444 27863404 ~ 27864068 (-)
G2219594 NA other downstream 1865111 27844874 ~ 27845401 (-)
LOC110521640 LOC106584214 other downstream 2530124 27157549 ~ 27180815 (-)
G2223487 NA other upstream 1537315 31274720 ~ 31275143 (-)
G2224948 NA other upstream 2684327 32421732 ~ 32422047 (-)
G2226519 NA other upstream 3891717 33629122 ~ 33629894 (-)
LOC110521741 LOC106584188 other upstream 3962475 33686041 ~ 33710890 (-)
G2226745 NA other upstream 4071974 33809379 ~ 33809894 (-)

Expression


Co-expression Network