LOC110521697 (LOC106584145)


Basic Information

Item Value
gene id LOC110521697
gene name LOC106584145
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 29893802 ~ 29992077 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036968751.1
GGACATTTTAATAGTGCTAGAGAGCAAGCAAGCGAATATCACTCAGATGCATGCCACTACACTGACGGGAGTGTAAGAAAGCATTGCACTGACTCGAGTGCACAGTGCTCCAAGTGAGTCTCTCCAAtcaaatttaaaaacaaatagAAAAGAAGATAATTTGGCTTTTTTTGACGAGGAGGGGAAAACAACCAGCTATTATTGCATGCATGCGTTGTTTATTCTATGGAACATCATAAATAACCTATTTTCACCCTGGAAAAACACAAGATTCACCTGCAGAAGGTGACATTTGTTTTCCCTCGTTGGAACGAGCGACGCGCGCTTGTTCGACTGTCCGGTGCGCTGTGTTGCCTTCTCCTTCCTTTGGATTTTACACCATCGAGGGTACCCACTGATTCGGTGAGAGAGGGATCCAGCCATTCAGGGAGACATTGTAACAACTTCAGTGATCAGCTTAGTACAACACAGCTTGCAGAATCAGGACACTGGGAGAGAAGTTTGGGGAGAATGAAGAGTCGTCGGGTGCGGGGGAAGCATGAGTGGCCGGTGTATCACTGTTAGACGGGCGGCTCTGATGGTTCTATGGGAGTGTACAACTCTAAACCTCCTCCAGTGCTGGGTGGTAGTGGCGGCGGCCGCGGGGGCCAGCCGTACTGGAGTTGGGGCCGCTGCAGATGCAGGGGGCTCCAGCAATGCCACGGGGCCCTTTGCCTGGCTCCTGTCTGACAAAGGGCCCTTTCATCACTCCCAGGAGTTTTCTGACTTTACAGAGCGCTACCAGCAAGGATTCACCACCAAGTACACGATATACAGGGAGTTTGGCCGCTGGAAGGTGAACAGCCTGGCTCTAGAGAGACAGGATAACAATGGTCTGGCTCTGCCTCTGGACCCCGAGTTCCTTCAGACCATAAGGCACCTGGGCAGACGGCCCAGCCTCAGCTCTATCACAGACAGCATCATCAGGAAGTTCGGAACACACTTTCTACTCTCAGCCACCCTGGGGGGGGAGGAGTCGTTAATGATCTTTGTGGACAAGCGGAGGTTGAGTAGGACAGTGGAGGCAAGCGAGGCCAACGGTACGGCCGTGACTCTGGAGGCACTCCACCAGCTGGCTGCATCCTACTTCATCGACAGGGAAGGCACCTTGCGCAAGCTACACCACATCCAAATAGCATCCACAGCCATCAAGgTGACCGAAACAAGGACAGGCCCTCTTGGATGCAGTAACTATGACAACCTGGACTCAGTCAGCTCTGTTCTGGTTCAGAGCCCTGAAAACAAGATTAATCTGCAAGGTCTCCAGACCATCCTACCAGAGTACCTGAGGGCTAGGTTTGTCCAGGCGGCTCTGAACTACATTGGCTGTAATGAGGAGGGTCAGTTTGTGTGCCGGGACAATGACTGTTGGTGCCGCTGCAGCCCAGGCTTCCCCCAGTGTAACTGCCCCAACGTGGACCTGAGGGCCATGGAGGCCAGCCTAATGCACATCAGGGACACCTGGAACATAGCCAACCAGGACTTTGAGGAGTCAGAGGAGTTCCAGAACTTTGTACGGAGACTACCGACATTCTACGCCCTCAACACATCTGCCATCCAGTACTTCTGGAAAATGGAGCCTGCCGTCCATCAGCGCTACAGACAGCTAGATCTCAGCAGCAGACAGCTTATCGCCAAATCCAGACGGATCGTTGACAAACTCTTCACCCTCAGCAAGAGGTGTCGGACACAGCTGACAGTCGTTGTgctgagaaagagGTCCTTCAGCTACTGGCTGAACTACATCCTGTCCATCATGTACTGCAGTGAGAACAACTACATAGGTTCCTACCTGGAGGAGACAAGGAGCTGCTCTTGCCCCTACGACCATCCGTCCTGCCAGGGTGTCATCCCTTGCACTGTGGGCGATGCCTCTTTCTGCGCCTCTTGCTCCTATGACAACCGCTCCCGCTGTGCCAGCTGCAACCCCGGGTACATGCTCAGCCAGGGGGTCTGCCGCAATGAGGTCCCAGACTCCACGGACCACTACATCAGCTTCGAGACAGACCTGCAGGACCTGGAGCTGAGATACCTGCTGCAGAAGAAAGACAGCCGTATTAGCATCCATGGGATCTTCGTCAGCAACGACGTCCGACTCAACAACTGGTTTGACCCATCGTGGAGGAAGAGGATGCTGTTGACATTGAAGAGCAACAAGTACAAGTCCAACCACGTCCACATGCTCCTGGGGATGACCCTGCAGATCTGCCTAACTAGGAACAGCTCCCTGGAACCAGTGCTGTCTGTCTACATCAACCCCTTCGGGGGAAGTCACTCTGAGAGCTGGAGCATGCCCATAGACCAGAACAGCTATCCTGATTGGGAGAGGACTAAACTAAACATTCCCCTGGACTGTTACAACTGGACATTGACTTTGGGTAACAAGTGGAAAACGTTTTTTGAGACTGTCCACTTCTACCTGCGGAGCAGGATCAGGGCTCCATTGCCCCAAGGGAACGGCTCGGTGTACTACGAACCTTTCGAGTTTCTGGAGCCCGGTAAGAACCTGGGctacatgaaaataaatagcatCCAGGTGTTCGGCTATAGTATGCATTTTGACCCAGAAGCGATCCAGGACCTGATTCTGCAGCTGGACTACCCGTACACTCAGGGATCGCAGGACTCAGCCCTGCTGCAGCTGCTGGAGATCAGGGACCGGGTCAACAGACTGTCCCCTCCCGGACCTCAGCTCCTGGACCTGTTCTCCTGTCTCCTGCGCCACCGCCTCAAATTATCCACCACAGATGTTGTCCGAATACAGGCAGCGTTGCAGGCTTTCTCTGCCAAACAGCCTAATTCCATGGAATACGAAACAACCAAATTATGTAGCTAATAAGGTGCCAGTGTCCAGATATGCAGATGCTTGTGCTGctatcacactgacctgattacaGTTAAGAGCAGTTTTGGAAGGCACTGAGGGACATTTTGGTTATGATCTCAAGAGATATGCATTTGGATTAATGTAAAATTATAACTTTCTGGAAATGTGTTGTGTCATAGACACATATAACAGGGGGCTTCATCATGTTCACTTTGCCTTTTTACATAATAACAATAAAACTCAGACTTTCTGACCATTATCGATATCAAAAGATGTATCATCACTGATATGTTGCCCATGTCCTGACATCCTTAAATTGCACAGATCTCAATCACTTACAATGTGATGCTTTTGCTGATAATGAAGTGTTATCTCGACAGTGTGTTTGGTTTGACACCAGCATGGCTTTAGGTCCTTCACTTTGTTATTAAACACAACCCATGTTTTTATACTCACACTCTTCAGTTTAATCCTACCCCACCCCATGTTCAGAGCTTCATGAGTTAATATGGAAATCAACTGTTccttgtttaactttttttttcatATGTTTAAATTCCCACAAATTGGAGTTACAGTACTTCAGACGTACAGAAATAAAACACCACAAATGCAGTGGCTAGTATGTTATGTTACATGTCATTTAATTTTTTATACTGCAGTTGTTTGTGAACAGTTACTAAGCAATGTCCATATGCTGTATAACATTCTGAATTTGTTCATTCACTAAATAAAAGTCATTTTTATGTCCTGTCT
>XM_036968752.1
GGACATTTTAATAGTGCTAGAGAGCAAGCAAGCGAATATCACTCAGATGCATGCCACTACACTGACGGGAGTGTAAGAAAGCATTGCACTGACTCGAGTGCACAGTGCTCCAAGTGAGTCTCTCCAAtcaaatttaaaaacaaatagAAAAGAAGATAATTTGGCTTTTTTTGACGAGGAGGGGAAAACAACCAGCTATTATTGCATGCATGCGTTGTTTATTCTATGGAACATCATAAATAACCTATTTTCACCCTGGAAAAACACAAGATTCACCTGCAGAAGGTGACATTTGTTTTCCCTCGTTGGAACGAGCGACGCGCGCTTGTTCGACTGTCCGGTGCGCTGTGTTGCCTTCTCCTTCCTTTGGATTTTACACCATCGAGGGTACCCACTGATTCGGGAGACATTGTAACAACTTCAGTGATCAGCTTAGTACAACACAGCTTGCAGAATCAGGACACTGGGAGAGAAGTTTGGGGAGAATGAAGAGTCGTCGGGTGCGGGGGAAGCATGAGTGGCCGGTGTATCACTGTTAGACGGGCGGCTCTGATGGTTCTATGGGAGTGTACAACTCTAAACCTCCTCCAGTGCTGGGTGGTAGTGGCGGCGGCCGCGGGGGCCAGCCGTACTGGAGTTGGGGCCGCTGCAGATGCAGGGGGCTCCAGCAATGCCACGGGGCCCTTTGCCTGGCTCCTGTCTGACAAAGGGCCCTTTCATCACTCCCAGGAGTTTTCTGACTTTACAGAGCGCTACCAGCAAGGATTCACCACCAAGTACACGATATACAGGGAGTTTGGCCGCTGGAAGGTGAACAGCCTGGCTCTAGAGAGACAGGATAACAATGGTCTGGCTCTGCCTCTGGACCCCGAGTTCCTTCAGACCATAAGGCACCTGGGCAGACGGCCCAGCCTCAGCTCTATCACAGACAGCATCATCAGGAAGTTCGGAACACACTTTCTACTCTCAGCCACCCTGGGGGGGGAGGAGTCGTTAATGATCTTTGTGGACAAGCGGAGGTTGAGTAGGACAGTGGAGGCAAGCGAGGCCAACGGTACGGCCGTGACTCTGGAGGCACTCCACCAGCTGGCTGCATCCTACTTCATCGACAGGGAAGGCACCTTGCGCAAGCTACACCACATCCAAATAGCATCCACAGCCATCAAGgTGACCGAAACAAGGACAGGCCCTCTTGGATGCAGTAACTATGACAACCTGGACTCAGTCAGCTCTGTTCTGGTTCAGAGCCCTGAAAACAAGATTAATCTGCAAGGTCTCCAGACCATCCTACCAGAGTACCTGAGGGCTAGGTTTGTCCAGGCGGCTCTGAACTACATTGGCTGTAATGAGGAGGGTCAGTTTGTGTGCCGGGACAATGACTGTTGGTGCCGCTGCAGCCCAGGCTTCCCCCAGTGTAACTGCCCCAACGTGGACCTGAGGGCCATGGAGGCCAGCCTAATGCACATCAGGGACACCTGGAACATAGCCAACCAGGACTTTGAGGAGTCAGAGGAGTTCCAGAACTTTGTACGGAGACTACCGACATTCTACGCCCTCAACACATCTGCCATCCAGTACTTCTGGAAAATGGAGCCTGCCGTCCATCAGCGCTACAGACAGCTAGATCTCAGCAGCAGACAGCTTATCGCCAAATCCAGACGGATCGTTGACAAACTCTTCACCCTCAGCAAGAGGTGTCGGACACAGCTGACAGTCGTTGTgctgagaaagagGTCCTTCAGCTACTGGCTGAACTACATCCTGTCCATCATGTACTGCAGTGAGAACAACTACATAGGTTCCTACCTGGAGGAGACAAGGAGCTGCTCTTGCCCCTACGACCATCCGTCCTGCCAGGGTGTCATCCCTTGCACTGTGGGCGATGCCTCTTTCTGCGCCTCTTGCTCCTATGACAACCGCTCCCGCTGTGCCAGCTGCAACCCCGGGTACATGCTCAGCCAGGGGGTCTGCCGCAATGAGGTCCCAGACTCCACGGACCACTACATCAGCTTCGAGACAGACCTGCAGGACCTGGAGCTGAGATACCTGCTGCAGAAGAAAGACAGCCGTATTAGCATCCATGGGATCTTCGTCAGCAACGACGTCCGACTCAACAACTGGTTTGACCCATCGTGGAGGAAGAGGATGCTGTTGACATTGAAGAGCAACAAGTACAAGTCCAACCACGTCCACATGCTCCTGGGGATGACCCTGCAGATCTGCCTAACTAGGAACAGCTCCCTGGAACCAGTGCTGTCTGTCTACATCAACCCCTTCGGGGGAAGTCACTCTGAGAGCTGGAGCATGCCCATAGACCAGAACAGCTATCCTGATTGGGAGAGGACTAAACTAAACATTCCCCTGGACTGTTACAACTGGACATTGACTTTGGGTAACAAGTGGAAAACGTTTTTTGAGACTGTCCACTTCTACCTGCGGAGCAGGATCAGGGCTCCATTGCCCCAAGGGAACGGCTCGGTGTACTACGAACCTTTCGAGTTTCTGGAGCCCGGTAAGAACCTGGGctacatgaaaataaatagcatCCAGGTGTTCGGCTATAGTATGCATTTTGACCCAGAAGCGATCCAGGACCTGATTCTGCAGCTGGACTACCCGTACACTCAGGGATCGCAGGACTCAGCCCTGCTGCAGCTGCTGGAGATCAGGGACCGGGTCAACAGACTGTCCCCTCCCGGACCTCAGCTCCTGGACCTGTTCTCCTGTCTCCTGCGCCACCGCCTCAAATTATCCACCACAGATGTTGTCCGAATACAGGCAGCGTTGCAGGCTTTCTCTGCCAAACAGCCTAATTCCATGGAATACGAAACAACCAAATTATGTAGCTAATAAGGTGCCAGTGTCCAGATATGCAGATGCTTGTGCTGctatcacactgacctgattacaGTTAAGAGCAGTTTTGGAAGGCACTGAGGGACATTTTGGTTATGATCTCAAGAGATATGCATTTGGATTAATGTAAAATTATAACTTTCTGGAAATGTGTTGTGTCATAGACACATATAACAGGGGGCTTCATCATGTTCACTTTGCCTTTTTACATAATAACAATAAAACTCAGACTTTCTGACCATTATCGATATCAAAAGATGTATCATCACTGATATGTTGCCCATGTCCTGACATCCTTAAATTGCACAGATCTCAATCACTTACAATGTGATGCTTTTGCTGATAATGAAGTGTTATCTCGACAGTGTGTTTGGTTTGACACCAGCATGGCTTTAGGTCCTTCACTTTGTTATTAAACACAACCCATGTTTTTATACTCACACTCTTCAGTTTAATCCTACCCCACCCCATGTTCAGAGCTTCATGAGTTAATATGGAAATCAACTGTTccttgtttaactttttttttcatATGTTTAAATTCCCACAAATTGGAGTTACAGTACTTCAGACGTACAGAAATAAAACACCACAAATGCAGTGGCTAGTATGTTATGTTACATGTCATTTAATTTTTTATACTGCAGTTGTTTGTGAACAGTTACTAAGCAATGTCCATATGCTGTATAACATTCTGAATTTGTTCATTCACTAAATAAAAGTCATTTTTATGTCCTGTCT

Function

NR:

description
BMP/retinoic acid-inducible neural-specific protein 3-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036968751.1 False 3622 mRNA 0.49 9 29893802 29992077
XM_036968752.1 True 3597 mRNA 0.49 9 29893802 29992077

Neighbor

gene id symbol gene type direction distance location
LOC110521696 LOC106584092 coding downstream 156397 29710512 ~ 29737405 (-)
LOC110521695 LOC106584091 coding downstream 220963 29670113 ~ 29672839 (-)
LOC110521694 LOC106584144 coding downstream 242408 29634764 ~ 29651394 (-)
LOC110521692 LOC106584141 coding downstream 337137 29322323 ~ 29556665 (-)
LOC110521690 LOC106584139 coding downstream 609254 29264130 ~ 29284548 (-)
LOC110521699 LOC106584146 coding upstream 476542 30468619 ~ 30537355 (-)
uchl5 LOC106584153 coding upstream 894551 30886628 ~ 30901651 (-)
LOC118945813 NA coding upstream 924767 30916844 ~ 30922903 (-)
LOC110520953 NA coding upstream 1259513 31251582 ~ 31254143 (-)
LOC110521709 LOC106584156 coding upstream 1290927 31283004 ~ 31287087 (-)
G2221553 NA non-coding downstream 58580 29834957 ~ 29835222 (-)
G2221552 NA non-coding downstream 59074 29834392 ~ 29834728 (-)
G2221538 NA non-coding downstream 68487 29820088 ~ 29825315 (-)
G2221528 NA non-coding downstream 75529 29817958 ~ 29818273 (-)
G2221497 NA non-coding downstream 98632 29794932 ~ 29795170 (-)
G2221860 NA non-coding upstream 78803 30070880 ~ 30071232 (-)
G2222144 NA non-coding upstream 189710 30181787 ~ 30190913 (-)
G2222248 NA non-coding upstream 361423 30353500 ~ 30353716 (-)
G2222249 NA non-coding upstream 362060 30354137 ~ 30354340 (-)
G2222252 NA non-coding upstream 367096 30359173 ~ 30359483 (-)
G2221180 NA other downstream 420127 29468643 ~ 29473675 (-)
lnx1 lnx1 other downstream 1511527 28307617 ~ 28382340 (-)
G2219602 NA other downstream 2029734 27863404 ~ 27864068 (-)
G2219594 NA other downstream 2048401 27844874 ~ 27845401 (-)
LOC110521640 LOC106584214 other downstream 2713414 27157549 ~ 27180815 (-)
G2223487 NA other upstream 1282643 31274720 ~ 31275143 (-)
G2224948 NA other upstream 2429655 32421732 ~ 32422047 (-)
G2226519 NA other upstream 3637045 33629122 ~ 33629894 (-)
LOC110521741 LOC106584188 other upstream 3707803 33686041 ~ 33710890 (-)
G2226745 NA other upstream 3817302 33809379 ~ 33809894 (-)

Expression


Co-expression Network