G2211276 (ttc14)


Basic Information

Item Value
gene id G2211276
gene name ttc14
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 21303096 ~ 21303454 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2529698
CTGATAGTATGATAGCGGATCATCATGATTGCCATTGGAAGGTACATCTCTAAGGGGACACAGGGCCGTGAGCTCCAGATCCTCTATGTCTCGCTCTAGTCCACCTCCCATGCAGATCAAAGTTACAAAGAAGCCAAAGTCCCTGATGGAGTTGATCCTGCCTATCACAATGTCCCCTCGCTCAATGTCCCTGTACAAGAGATTTCTCCGTTCCTCAAACGACACCTCCATGAACTGCTCCAGAGGGGGCATGATGGCGTAGGGC

Function

symbol description
ttc14 Predicted to enable nucleic acid binding activity. Orthologous to human TTC14 (tetratricopeptide repeat domain 14).

NR:

description
PREDICTED: tetratricopeptide repeat protein 14 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2529698 True 265 lncRNA 0.51 2 21303096 21303454

Neighbor

gene id symbol gene type direction distance location
LOC110521532 LOC106584351 coding downstream 583364 20717114 ~ 20719732 (-)
LOC110521534 NA coding downstream 588485 20705949 ~ 20714611 (-)
plekhb2 pkhb2 coding downstream 647764 20648384 ~ 20655332 (-)
cts12 LOC106584253 coding downstream 672327 20628580 ~ 20630769 (-)
lama3 LOC106584357 coding downstream 675107 20611261 ~ 20627989 (-)
LOC110521545 NA coding upstream 49261 21352715 ~ 21360879 (-)
LOC110521548 LOC106584340 coding upstream 363745 21666793 ~ 21800817 (-)
LOC110521551 LOC106584337 coding upstream 706889 22010343 ~ 22107387 (-)
LOC110522763 LOC100286605 coding upstream 876643 22180097 ~ 22654975 (-)
LOC110521557 LOC106584333 coding upstream 992160 22295614 ~ 22321717 (-)
G2211273 NA non-coding downstream 1026 21301786 ~ 21302070 (-)
G2211261 LOC106584347 non-coding downstream 12820 21285531 ~ 21290276 (-)
G2211250 NA non-coding downstream 27497 21275144 ~ 21275599 (-)
G2211242 NA non-coding downstream 43872 21258656 ~ 21259224 (-)
G2210982 NA non-coding downstream 380009 20902673 ~ 20923087 (-)
G2211477 NA non-coding upstream 175299 21478753 ~ 21481081 (-)
G2211490 NA non-coding upstream 180997 21484451 ~ 21484661 (-)
G2212741 NA non-coding upstream 344149 21647603 ~ 21647833 (-)
G2212747 NA non-coding upstream 348516 21651970 ~ 21652206 (-)
G2210769 NA other downstream 779985 20518340 ~ 20523111 (-)
LOC110521508 LOC106584371 other downstream 1167881 20129636 ~ 20197258 (-)
LOC110521505 LOC106584372 other downstream 1219512 20067742 ~ 20083690 (-)
LOC110521464 LOC106584409 other downstream 2979691 18306119 ~ 18392555 (-)
G2208093 NA other downstream 3115571 18187125 ~ 18187525 (-)
G2211274 ttc14 other upstream 1387 21304841 ~ 21306542 (-)
G2212755 NA other upstream 362510 21665964 ~ 21666615 (-)
G2212908 LOC106613883 other upstream 604509 21907963 ~ 21910736 (-)
LOC110521564 LOC106584326 other upstream 1682905 22982517 ~ 23008109 (-)
G2213654 NA other upstream 1875052 23178506 ~ 23179611 (-)

Expression


Co-expression Network