Gene
RNA
| Item | Value |
|---|---|
| gene id | G2217007 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050570.1 |
| NCBI id | CM025857.1 |
| chromosome length | 46327593 |
| location | 25867875 ~ 25868185 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2535868 | True | 311 | lncRNA | 0.35 | 1 | 25867875 | 25868185 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110521612 | LOC106584284 | coding | downstream | 62223 | 25779306 ~ 25805652 (-) |
| LOC110521609 | LOC106584282 | coding | downstream | 184820 | 25656346 ~ 25683055 (-) |
| LOC110521606 | ipo13 | coding | downstream | 384014 | 25429088 ~ 25483861 (-) |
| LOC110521604 | LOC106584290 | coding | downstream | 460715 | 25392026 ~ 25407160 (-) |
| rabggta | rabggta | coding | downstream | 522855 | 25337800 ~ 25345020 (-) |
| LOC110521615 | tnfl6 | coding | upstream | 70586 | 25938771 ~ 25942364 (-) |
| LOC110521616 | LOC106584280 | coding | upstream | 103583 | 25971768 ~ 25973913 (-) |
| LOC100305228 | prdx6 | coding | upstream | 259351 | 26127536 ~ 26132937 (-) |
| itpa | itpa | coding | upstream | 439401 | 26307586 ~ 26312047 (-) |
| pigc | pigc | coding | upstream | 498703 | 26366888 ~ 26370050 (-) |
| G2216976 | LOC106584281 | non-coding | downstream | 10830 | 25819255 ~ 25857045 (-) |
| G2216871 | NA | non-coding | downstream | 181835 | 25668905 ~ 25686040 (-) |
| G2216807 | NA | non-coding | downstream | 274283 | 25592534 ~ 25593592 (-) |
| G2216823 | NA | non-coding | downstream | 276681 | 25590737 ~ 25591194 (-) |
| G2216696 | NA | non-coding | downstream | 485077 | 25361917 ~ 25382798 (-) |
| G2217010 | NA | non-coding | upstream | 2291 | 25870476 ~ 25870726 (-) |
| G2217011 | NA | non-coding | upstream | 2626 | 25870811 ~ 25871046 (-) |
| G2217035 | NA | non-coding | upstream | 40810 | 25908995 ~ 25909417 (-) |
| G2217037 | NA | non-coding | upstream | 41576 | 25909761 ~ 25910074 (-) |
| G2217694 | NA | non-coding | upstream | 189878 | 26058063 ~ 26058451 (-) |
| G2213647 | NA | other | downstream | 2668469 | 23197647 ~ 23199406 (-) |
| G2213654 | NA | other | downstream | 2688264 | 23178506 ~ 23179611 (-) |
| LOC110521564 | LOC106584326 | other | downstream | 2866627 | 22982517 ~ 23008109 (-) |
| G2212908 | LOC106613883 | other | downstream | 3957139 | 21907963 ~ 21910736 (-) |
| G2212755 | NA | other | downstream | 4201260 | 21665964 ~ 21666615 (-) |
| G2217605 | NA | other | upstream | 49169 | 25917354 ~ 25920245 (-) |
| G2217805 | prrc2c | other | upstream | 368500 | 26236685 ~ 26237398 (-) |
| G2217824 | NA | other | upstream | 400161 | 26268346 ~ 26341495 (-) |
| G2218118 | NA | other | upstream | 1020704 | 26888889 ~ 26890611 (-) |
| LOC110521640 | LOC106584214 | other | upstream | 1305068 | 27157549 ~ 27180815 (-) |
