Gene
RNA
| Item | Value |
|---|---|
| gene id | G2219598 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050570.1 |
| NCBI id | CM025857.1 |
| chromosome length | 46327593 |
| location | 27850629 ~ 27850957 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2538746 | True | 329 | lncRNA | 0.33 | 1 | 27850629 | 27850957 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110521652 | NA | coding | downstream | 51276 | 27685359 ~ 27799353 (-) |
| LOC110521649 | LOC106584220 | coding | downstream | 285416 | 27562219 ~ 27565213 (-) |
| LOC110521648 | LOC106584217 | coding | downstream | 290665 | 27544152 ~ 27559964 (-) |
| LOC110521645 | LOC106584222 | coding | downstream | 393066 | 27446045 ~ 27457563 (-) |
| LOC110521644 | LOC106584218 | coding | downstream | 422959 | 27356263 ~ 27427670 (-) |
| LOC110521657 | LOC106584104 | coding | upstream | 6177 | 27857134 ~ 27948108 (-) |
| LOC110521660 | LOC106584108 | coding | upstream | 122187 | 27973144 ~ 27983258 (-) |
| LOC110522776 | LOC106584109 | coding | upstream | 134560 | 27985517 ~ 27989064 (-) |
| LOC110521662 | LOC106584112 | coding | upstream | 182209 | 28033166 ~ 28051936 (-) |
| LOC110521664 | scfd2 | coding | upstream | 247086 | 28098043 ~ 28165253 (-) |
| G2219596 | NA | non-coding | downstream | 1117 | 27849296 ~ 27849512 (-) |
| G2219579 | NA | non-coding | downstream | 30348 | 27820046 ~ 27820281 (-) |
| G2219576 | NA | non-coding | downstream | 33562 | 27816498 ~ 27817067 (-) |
| G2219552 | NA | non-coding | downstream | 65016 | 27785250 ~ 27785613 (-) |
| G2219531 | NA | non-coding | downstream | 95624 | 27748382 ~ 27755005 (-) |
| G2219599 | LOC106584105 | non-coding | upstream | 854 | 27851811 ~ 27852702 (-) |
| G2219600 | NA | non-coding | upstream | 2052 | 27853009 ~ 27853287 (-) |
| G2219622 | NA | non-coding | upstream | 98339 | 27949296 ~ 27949507 (-) |
| G2219863 | NA | non-coding | upstream | 519899 | 28370856 ~ 28371089 (-) |
| G2220364 | NA | non-coding | upstream | 689967 | 28540924 ~ 28541160 (-) |
| G2219594 | NA | other | downstream | 5228 | 27844874 ~ 27845401 (-) |
| LOC110521640 | LOC106584214 | other | downstream | 670241 | 27157549 ~ 27180815 (-) |
| G2218118 | NA | other | downstream | 960018 | 26888889 ~ 26890611 (-) |
| G2217824 | NA | other | downstream | 1509134 | 26268346 ~ 26341495 (-) |
| G2217805 | prrc2c | other | downstream | 1613231 | 26236685 ~ 26237398 (-) |
| G2219602 | NA | other | upstream | 12447 | 27863404 ~ 27864068 (-) |
| lnx1 | lnx1 | other | upstream | 522339 | 28307617 ~ 28382340 (-) |
| G2221180 | NA | other | upstream | 1617686 | 29468643 ~ 29473675 (-) |
| G2223487 | NA | other | upstream | 3423763 | 31274720 ~ 31275143 (-) |
| G2224948 | NA | other | upstream | 4570775 | 32421732 ~ 32422047 (-) |
