Gene
RNA
| Item | Value |
|---|---|
| gene id | G2327195 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 39038289 ~ 39045499 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2661432 | True | 312 | lncRNA | 0.38 | 2 | 39038289 | 39045499 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110488444 | LOC108240561 | coding | downstream | 489429 | 38204743 ~ 38548860 (-) |
| tgfr2 | tgfr2 | coding | downstream | 890363 | 38117150 ~ 38147926 (-) |
| LOC110488472 | LOC106570075 | coding | downstream | 945773 | 37997250 ~ 38092516 (-) |
| LOC110517080 | tmem42 | coding | downstream | 1153845 | 37880939 ~ 37884444 (-) |
| LOC110488396 | LOC106570071 | coding | downstream | 1173383 | 37861639 ~ 37864906 (-) |
| clk2a | LOC106570085 | coding | upstream | 13605 | 39059104 ~ 39074413 (-) |
| LOC110487682 | LOC106588190 | coding | upstream | 35301 | 39080800 ~ 39097864 (-) |
| cers2a | LOC106570086 | coding | upstream | 73041 | 39118540 ~ 39135446 (-) |
| celf3a | LOC106570087 | coding | upstream | 94811 | 39140310 ~ 39160745 (-) |
| rprd2a | LOC106588187 | coding | upstream | 116263 | 39161762 ~ 39207900 (-) |
| G2327201 | NA | non-coding | downstream | 37 | 38991402 ~ 39038252 (-) |
| G2327149 | NA | non-coding | downstream | 103760 | 38929504 ~ 38934529 (-) |
| G2326842 | NA | non-coding | downstream | 118928 | 38919153 ~ 38919361 (-) |
| G2326809 | NA | non-coding | downstream | 141435 | 38896543 ~ 38896854 (-) |
| G2326787 | NA | non-coding | downstream | 155442 | 38882631 ~ 38882847 (-) |
| G2327251 | NA | non-coding | upstream | 59321 | 39104820 ~ 39105088 (-) |
| G2327255 | NA | non-coding | upstream | 64162 | 39109661 ~ 39109946 (-) |
| G2327256 | NA | non-coding | upstream | 64554 | 39110053 ~ 39110267 (-) |
| G2327279 | NA | non-coding | upstream | 110751 | 39156250 ~ 39157772 (-) |
| G2327347 | LOC106570093 | non-coding | upstream | 263061 | 39308560 ~ 39309991 (-) |
| si:ch211-153f2.3 | LOC104957086 | other | downstream | 1763730 | 37268611 ~ 37274589 (-) |
| LOC110488406 | med30 | other | downstream | 1801364 | 37204063 ~ 37240288 (-) |
| G2323152 | NA | other | downstream | 3223688 | 35811050 ~ 35814601 (-) |
| G2322592 | NA | other | downstream | 3468873 | 35568749 ~ 35569416 (-) |
| G2327199 | NA | other | upstream | 8798 | 39054297 ~ 39057009 (-) |
| mrps21 | mrps21 | other | upstream | 104373 | 39149872 ~ 39234977 (-) |
| G2327348 | LOC106588182 | other | upstream | 264943 | 39310442 ~ 39316952 (-) |
| LOC110517409 | LOC106570099 | other | upstream | 462958 | 39508407 ~ 39510810 (-) |
