G2327279


Basic Information

Item Value
gene id G2327279
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 39156250 ~ 39157772 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2661530
aaatatatgtatattttttgagattcttcaaagtagccaccctttgccttgacagctttgcacactcttggcattctctcaaccagcttcatgaggtagtcacctggaatgcatgtaaattaacaggtgggccttgttaaatgttaatttctggaatttctttccttaatgcgtttagTCACAATTgattgacaaggtaggggtggtatacagaagatagccctatttggtaaaagaccaagtccatattatggcaagaacagctcaaataagcaaggagaaacaacagtccattactttaagacatgaaggtatttagaattcaaggcacacttaatcggcatggcaaccacagcattctgcaacgatacgccatcccttatggtttgggtttagtgggactaccatttgtttttcaacaggacaatgacccaaaacacacctccaggctgtgtaagggctatttgaccaagaaggagagtgatggtgctgcatcagatgacctggcctccacaatcacccaacctaaacccaatggagatggtttgggatgagtcggaccgcagagtgaaggagaagcagccaacaaatgctcagcatatatgggaactccatcaagactgttggaaaagcattccctctgaagctggttgagagaatgccaagagtgtgcaaagctgtcatcaaggcaaagggtggctactttgaagaatctcaaatataacactttttggggtttctacatgattccatatgtgttattcaatAGTTTTGTtctcttaact

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2661530 True 785 lncRNA 0.42 2 39156250 39157772

Neighbor

gene id symbol gene type direction distance location
cers2a LOC106570086 coding downstream 20804 39118540 ~ 39135446 (-)
LOC110487682 LOC106588190 coding downstream 58386 39080800 ~ 39097864 (-)
clk2a LOC106570085 coding downstream 81837 39059104 ~ 39074413 (-)
LOC110488444 LOC108240561 coding downstream 607390 38204743 ~ 38548860 (-)
tgfr2 tgfr2 coding downstream 1008324 38117150 ~ 38147926 (-)
rprd2a LOC106588187 coding upstream 3990 39161762 ~ 39207900 (-)
LOC110510413 ciart coding upstream 58322 39216094 ~ 39221057 (-)
mrps21 mrps21 coding upstream 72322 39149872 ~ 39234977 (-)
lrrc71 lrrc71 coding upstream 203696 39361468 ~ 39376902 (-)
LOC110487680 LOC106570095 coding upstream 240955 39396388 ~ 39412355 (-)
G2327256 NA non-coding downstream 45983 39110053 ~ 39110267 (-)
G2327255 NA non-coding downstream 46304 39109661 ~ 39109946 (-)
G2327251 NA non-coding downstream 51162 39104820 ~ 39105088 (-)
G2327195 NA non-coding downstream 110751 39038289 ~ 39045499 (-)
G2327201 NA non-coding downstream 117998 38991402 ~ 39038252 (-)
G2327347 LOC106570093 non-coding upstream 150788 39308560 ~ 39309991 (-)
G2327380 NA non-coding upstream 193614 39351386 ~ 39354373 (-)
G2327650 NA non-coding upstream 378250 39536022 ~ 39573237 (-)
G2327660 NA non-coding upstream 434320 39592092 ~ 39592385 (-)
G2327199 NA other downstream 99241 39054297 ~ 39057009 (-)
LOC110517080 tmem42 other downstream 1271857 37880939 ~ 37884444 (-)
si:ch211-153f2.3 LOC104957086 other downstream 1881691 37268611 ~ 37274589 (-)
LOC110488406 med30 other downstream 1919325 37204063 ~ 37240288 (-)
G2323152 NA other downstream 3341649 35811050 ~ 35814601 (-)
G2327348 LOC106588182 other upstream 152670 39310442 ~ 39316952 (-)
LOC110517409 LOC106570099 other upstream 350685 39508407 ~ 39510810 (-)
G2327652 NA other upstream 389311 39547083 ~ 39554931 (-)
G2328215 NA other upstream 882240 40040012 ~ 40041968 (-)

Expression


Co-expression Network