G3747


Basic Information

Item Value
gene id G3747
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 12171287 ~ 12173782 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU5157
TTTAAAGCTGTTCATTATCTGAAACCATTTATTGAGCACAGTGTAGAAGAGAGCCTACAACTTAAAAGTATGGCAAATGGACATTGAAATAAACACGACGCAAtattatttcacagataaattACAACATAGCAAATTAGCAAGGAAATGTAGTCCAGTAGTGTTTACATATAAAAGGCCCGCAACACCTCACCCCCACAGGGGTGACACaggtagaaaaaagaaaagctttcATTTGGTTTAGTTTGTATTTGGTGGGAGAGTCAGACGGAGAAATCGATCACAGCCTGACAATGTCCTGCTTTAGGCTTCTCAGAGACGGTTTAACTCATCTTTGACTGTTGCCCTGCCGGTCTggactttttattttgaaaggggcAGCTGTGATTCActagctagagtccaagtcaagtctctagtctctgagctagagaccaagtcaagtctctgagctagagtccaagtcaagtctctagTCTCTGAGCTAGAATCCAattcaagtctctgagctagagtccaagtcaagtctcaagtctttgagctagagtccaagtcaagtctcaagtctctgagctagagtccaagtcaagtctcaagtctctgagctagagtccaagtctcaagtctctcgTGGTTATAATGAGTGTTGTATCACCTGCTGCATTCCACCCAGGCTGCTTAGGCTTTGAACACTGCtatatataataacataatatatagctatatatagTAATATCTAGCCAACAACAGTCAGAATTAACCTCCCTTAGGTCGTAGCTAAAGCAAGGAGCaaggtaacgttagctggcCAACGCTGAGCTGGTTGAACCAGAATCTTGACACCACATATTTTGCATTCAGCGCTTATTTTGTTTGGCCCTCGTTGCATGTTGCGTGTTTTTAGAGCCGAAGCTTCTGATGAATTGTCACAGCAGCTGACGTCGACATGTTTGTTGTCCTCTCAAGTGTGGCCGCACGCAGCAGATACATAACGCTAGGGCGTAACTTCCACTGGGAACAGGGGGGACATGTCCCCCCCCACTCAATAACCTGTCCTCTACCGGTCAGAGATAGAAAATAAACCAGTTCAAAAATGGTAAGCAGCTTGGCTATATTTCTTTGTTGGCTCAAAGGTATGCTGTattggattttgtttttaaccatttgtaaacTAAACCCTCATTTACAATTTTGTGggtgtgactttttttgcaacgtcTTCACCATTCATATTTATACAAACAATGGGTTTACAGTTAAATTGCTTACAATAACACAATATTATTTACAAGAGGCACAGATTCTTCATAGATCTAGCCTCTTATTTTTGCTCTCAAAGtgcagattgatgctttaaactttaaaatgtataacATTTTCTTTAGGGGGGGGAGCCTGCCCCCCGATCCCCTTGGGTTGGAGGTCCACTGTAGGCTCCTCACCTGTTTTACTCCTGATTAGTTTGCGTGCCTGCAGTGGAAATTAAATctcatattttatatttcaatttgattcacacacaaaacattaacatttttgaCTTTATAAAATTATTCTCTCAAGTCTTGGCGATCAGCCCCTATAATATACAATTAGACATCCATTTCTTATACATACTTTTGTACTATTCTTTCTGGCAGAATTTATCATTATGATCAACTTAattatttcctggattttgTATAACCATAGTCCATATAAGTGTATGTTGACATGTAGGAAATGGGTTTTAAATCGAAAGAAGAAATTATAGCAGAggtcccccccccacacttcTCAAACCAAAGTTACGCCATCGACGTTAAGTGTTACATTAAACAGGTGTGTGATAGGTTACACGGTGATAGGGATTAACGTTCAGCTCATCAGACTTCCCACCTCTCAAGTCCCAgtcgagtctgaagtcttttaagGGACGAgtctcaagtcaagtctgaagttaCTGTGTGTGCCACTTACTGTAAGTGCGACTTGAGTCTTAGTCTCAAACTCCCCATCTCTTATATATAACCTCCAAAAAATGCTCCCTTCAAATGATCTTCTACCTGAGCCCCACATCTGtatacagaaaaaaagacttattTCACGTTTAGTGTACTAAAACATGCAATTAAACAACTTCACATTCAGTGTCCTCCAGAGAGCCGTATATCCACATAACCACAAAAGTCCTGAGGGATCAAGTTGTAAACGATCACCAGCGAAACCTAATTAAACCTCTCTGCACCCCACCAGGGCAACAGATATCCCCAAGCATATTGATTATTGACTCAGCATTTCAAATTTGGCACCTGTATTTGCCAGTGCCTTAAGAACTGTTCATTCATTTGCACTTTCTGTAAGGCACCGGATACTGTTCTTGCAATATTGCACAATCAAAAGTGACGTCAGTGGAAGTTATTTTGTAATCCATTTTAAGAATGTAATCCTATCAATGGACAGAGACTGGCAGGTTCacctcaggacacttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU5157 True 2471 lncRNA 0.47 2 12171287 12173782

Neighbor

gene id symbol gene type direction distance location
LOC120566952 LOC102289833,LOC101464297,LOC108231691 coding downstream 58009 11768031 ~ 12113278 (-)
zgc:92360 LOC103371798,LOC103383438,LOC100707756 coding downstream 449445 11697030 ~ 11721842 (-)
LOC120555467 LOC103371801,LOC104957815,LOC100709917 coding downstream 474984 11694501 ~ 11696303 (-)
gtpbp1l LOC101485704,LOC102291158,LOC102198385,LOC103371799,LOC100709644 coding downstream 485588 11667527 ~ 11685699 (-)
LOC120555815 LOC103383434 coding downstream 1095141 11053987 ~ 11076146 (-)
cyth4b LOC103356696,LOC100708025,LOC101487734 coding upstream 1747 12175529 ~ 12194735 (-)
LOC120562884 NA coding upstream 43831 12217613 ~ 12222178 (-)
LOC120562891 NA coding upstream 63636 12237418 ~ 12241090 (-)
LOC120562870 NA coding upstream 100904 12274686 ~ 12277084 (-)
LOC120567055 NA coding upstream 127083 12300865 ~ 12303131 (-)
G3707 NA non-coding downstream 376623 11794446 ~ 11794664 (-)
G3703 NA non-coding downstream 408489 11762492 ~ 11762798 (-)
G3687 NA non-coding downstream 506982 11664081 ~ 11664305 (-)
G3684 NA non-coding downstream 537209 11633876 ~ 11634078 (-)
G3667 NA non-coding downstream 576549 11544495 ~ 11594738 (-)
G3780 NA non-coding upstream 33069 12206851 ~ 12251840 (-)
G3781 NA non-coding upstream 33566 12207348 ~ 12255803 (-)
G3783 NA non-coding upstream 41673 12215455 ~ 12264006 (-)
G3821 NA non-coding upstream 254538 12428320 ~ 12428643 (-)
G3828 NA non-coding upstream 261770 12435552 ~ 12437402 (-)
nacc1b nacc1,LOC106946817,LOC106922850 other downstream 1178086 10966362 ~ 10993201 (-)
G3586 LOC104950333 other downstream 1266052 10899558 ~ 10905235 (-)
LOC120559237 LOC103359075 other downstream 1959983 9858080 ~ 10211304 (-)
G3373 LOC103359075 other downstream 2129283 9840590 ~ 10042004 (-)
LOC120559295 LOC102079284,LOC103374337,LOC105417663,LOC102799559,LOC102201385,LOC102294705,LOC101477163 other downstream 2603442 9525261 ~ 9567845 (-)
c1qtnf6b c1qtnf6,LOC103374348 other upstream 468231 12642013 ~ 12659983 (-)
LOC120561813 NA other upstream 630720 12804502 ~ 12832356 (-)
trnac-gca NA other upstream 686502 12860284 ~ 12860355 (-)
trnac-gca_1 NA other upstream 687912 12861694 ~ 12861765 (-)
trnac-gca_2 NA other upstream 688748 12862530 ~ 12862601 (-)

Expression


Co-expression Network