G4860


Basic Information

Item Value
gene id G4860
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 15993604 ~ 15994085 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU6580
ATTTATTAACATATGTCTAATCAGATGTGAAAACCTAGTTTGTATGCTGGGGAATGTCCTTcaaaagtgttttgttttttgaaagaTATTCTGTCAGATGAAGTGTGTGACAAGTTATTTTAAAGAGCAACTTAAATTTAAGAAGACTGACGGGAAGGGAAAATGGGAATATCTACGAAGGGTTTGTCATGACTTGAGTAAAACTGCGAAAGATAAGGCAGAATTGTAATTGTAAGCTCATTGTGTTACCGCTGAGCTGTGTTATGCACTGTGAAAACTATGGACCCCAATTATTTTTCCGTATTTAATTCTTCTGCTCTCAGTTGTGGCTGACTTCCGTTGAAAGATGAAAAGGCCACTGTCTATTTACTGATTTAAAAGATATTCCTATTAGTCCACATTTAGGGGGAGTTGATTAGTTTGGTTGGAGAGGGAGGGTGTAATGTCATTTGGTCAGAATctgttgatttttgttttgagat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU6580 True 482 lncRNA 0.36 1 15993604 15994085

Neighbor

gene id symbol gene type direction distance location
LOC120561525 xylt1,LOC102778305 coding downstream 94203 15816338 ~ 15899401 (-)
LOC120564766 NA coding downstream 569218 15419252 ~ 15424386 (-)
gpank1 gpank1 coding downstream 578641 15410498 ~ 15414963 (-)
LOC120564677 LOC104962345,LOC107388844,LOC108244157 coding downstream 592159 15395835 ~ 15401445 (-)
foxk1 foxk1 coding downstream 599931 15377200 ~ 15393673 (-)
nomo LOC446065,LOC107089097,LOC105931477,LOC102292868,LOC102196167 coding upstream 287 15994372 ~ 16034615 (-)
LOC120561637 gsg1l,LOC104954731,LOC103358062 coding upstream 56679 16050764 ~ 16058353 (-)
sec23b LOC100697981,LOC102779165,LOC101466658 coding upstream 70464 16064549 ~ 16078343 (-)
LOC120567135 LOC102194342,LOC101467413,LOC103358059,LOC102294944,LOC100712572 coding upstream 252319 16246404 ~ 16283686 (-)
wfikkn1 wfikkn1 coding upstream 358556 16352641 ~ 16356941 (-)
G4815 NA non-coding downstream 211851 15781397 ~ 15781753 (-)
G4799 NA non-coding downstream 257426 15735789 ~ 15736178 (-)
G4798 NA non-coding downstream 257922 15735355 ~ 15735682 (-)
G4797 NA non-coding downstream 262648 15730655 ~ 15730956 (-)
G4729 arpc1b,LOC100695691,LOC102293678,LOC101469153 non-coding downstream 664313 15328188 ~ 15329291 (-)
G4881 NA non-coding upstream 53759 16047844 ~ 16048880 (-)
G4886 NA non-coding upstream 55303 16049388 ~ 16049629 (-)
G4915 NA non-coding upstream 201189 16195274 ~ 16257571 (-)
LOC120558721 NA non-coding upstream 317844 16311929 ~ 16315887 (-)
G5068 NA non-coding upstream 330930 16325015 ~ 16325323 (-)
sdk1a sdk1,LOC104962449,LOC103362694 other downstream 307965 15426544 ~ 15685639 (-)
ubl5 ubl5 other downstream 1089375 14901146 ~ 14904229 (-)
LOC120555938 LOC103372451,LOC105939179,LOC103462061,LOC108245380 other downstream 1274502 14712144 ~ 14719102 (-)
LOC120558548 pde4a,LOC102299733,LOC102791271 other downstream 1951094 14018902 ~ 14042510 (-)
G4168 NA other downstream 2426338 13531753 ~ 13567266 (-)
LOC120558720 NA other upstream 351633 16345718 ~ 16347922 (-)
LOC120569099 NA other upstream 1417968 17412053 ~ 17421098 (-)
LOC120560175 NA other upstream 1716554 17710639 ~ 17713898 (-)
epn3b LOC102786458,LOC100695148,LOC103373411,LOC101478063,LOC105919984,LOC107373120,LOC108247943,LOC102303243 other upstream 1823422 17817507 ~ 17835761 (-)
LOC120556682 NA other upstream 1841819 17835904 ~ 17848037 (-)

Expression


Co-expression Network