G89505


Basic Information

Item Value
gene id G89505
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 32786720 ~ 32789113 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU120503
GCGTGCTTTTGCATAGACATTTAAAATtccaaaataaaagttattaaacATATAGTAAACAGATTTAGGAAATTTTATGCTGCATAATTTAGCAACAGGAAAAGTTCACCAGTCAGAATCAAGGCTTACAAGCTGTTGTCCTTTATCTGTATCATATAAATATACGTTAATAAGATCtgtatgtaattttttttccaacaggTGGAATAATTTAACTTTGCCAAGAAGCCGACACAATCAGTATGCATTATTACACTAATCATTATTATGGTGTTCACTATCTTCACCATcaccaaacattttttttggttCTTTGTGAAGCAATGGCTATGTATGTAGTCATTATATTAACgtcagaattattttttttcatgatgCCTTGAACATTCATATGAACTGGACAGTGTGCAGCATAAGACAGACAGTGTTATGGTTTTATATAAACTATGTGTGCTGCAGacaacagtttgacattttggtgcAGTTATAGCTCAAGCCTGCAAGCCCTGGTGAAACCTGCTCAACTGGTTTTTTATCAGTTGGTGACTGAGCCCTCTTAAGGTTTACCTGAAGCAGCACTGaatattaagaaaaaaagatttggaAATAGAATCATTttaatgcattattattttacTGTTCTTAGAAAATTGTTATTAAAATGGTCTTGCATGTTATTTCACATATGTaagaacatactgtatgtacatatatattatgtagCAGGGTCTTTCTTCAAACTAGAAAAGgggatataaaaaaaagattttctgcaGTTGTAGTATATTCCCACTGTGCTTTACCTATTTATataaattgttttaattaaagttGTTCTGCTGTAGTTACCAGTGTTGCTGTCGAGTGTTTAGAAGAGACATTTTGAGGATCCGCCAGTCACCATCAAGACCTGCTGCTGTCCAGTCAGATGGCTGATCCATCGTCAATCTGCGGGGATCTGCAGGGccactaaaaaaaaatggctttaATTGGACGGAGTGGGACCTGAAGGGGGGTCTGGAGAAAATAAACCCACTCTTGTCACCTAGCTGAAtctgtgacctttgaccccaaGATCCCCACAGCAGGAAGTCCGACAGGCTGGCTTCATGCCTTTACTCTGTCCCTCTGAAACACTACATCCATCCACCTTTATATCTACATGCATTTTCGTAATGTCTAACCAATAAGAAAATATCTGCTCTCTCTGACGACTTAAAGCTGGTGCAAAAAGAATCTCCTCTTCTGTACAAAGCAtcttacaaaatatttttttaatatttttatctttttgtatcattaatgacgaaaagaaaagaaaatggagGAAATATTACAAAAGACTCGCAAAAATATATCTCCACATTTCAGGCTCTGTTTCACATGACATCAAGAGTACATTGCATTAATGCTCTACAGTATAGTTTCAGTTCTGCAGCTTTGCTGATAATAAATGAAATCTAAATTGCCAAATAAGTCGCAGCTGTTCACAGCTGTTTAAAAAACTACAGTGAGGCCAATCATGGTGGAGGGAACTTCTGTTGACGGTCCTGAGTTGGTTCAACAGTTTGGGGGCTCTCTCTTGCTCAGTCTCTAcatacactctctcacacactttctgtctctctgtcccatcCAATTCCTTATCAGTCTTCCACATTCATCCACTATCTTTCACTTCTTTTACCCTCTGTCCTCTGAAGGGAGCTAcgaaagtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtccattggTAATGTGGGTGTACAGTTATTTGTCTTATGCTGTTGGCATTCTTAGGAACCAGTGAAAGAGCATGTATTTTGAGTGAATGACAATCACAATGAGTGTGAATAGTTTTGAATGTGCTCTGCAGTATTCTACAGCGATAGAGGAATCATCTAATTCCTTCAAATTCAATTTAaccacaacaaacaaaatacatagATGACACCTCCTAGCTGTACATTATGATGTTGTGAATGGCTGCCAGGTGATGCTTTGGCTGGTGAGGTCGGTGCAGTGAGGAGCAAAGCAGTAGTAAATGTTGGTTTGGTTATAAAGAATGGCACAGAAAGGCCTTACAACTGTGCATGATGATGCGGATACAGTGCGGACTGgtccacaaatacacaaaaagcTGTGTTGCTGGCTGGAATAAAAAAGCAGGATGATATGTCCGCAGAAGTGGAGACTCCTCCTTTGTTGTGAAAGCAATGGCTGCAGAGATTGAATGAACTGTGTGTGAACCGCTTATATGATGTGTGCTGGTTGCTCAGGAGGGTTGATAAGTCCTATGGCCCTACAGGAGAGCCATTTCTGCATTAGAATTTCTCATCGGGGATGACTGTGTTGAAGGGGTGGTCCCAGAATTTGGTGGTGATTCCAAAac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120503 True 2394 lncRNA 0.39 1 32786720 32789113

Neighbor

gene id symbol gene type direction distance location
snrkb LOC107103095,LOC101069520,LOC107389226 coding upstream 27219 32737802 ~ 32759501 (+)
LOC120564018 NA coding upstream 49914 32719505 ~ 32736806 (+)
LOC120564017 NA coding upstream 69283 32705734 ~ 32717437 (+)
LOC120564016 LOC100694473,LOC102308285,LOC101472020,LOC103379534,LOC102194645 coding upstream 92330 32669278 ~ 32694390 (+)
LOC120563342 LOC106532362 coding upstream 219975 32565259 ~ 32566745 (+)
usb1 usb1 coding downstream 124118 32913231 ~ 32918975 (+)
uba2 uba2 coding downstream 157580 32946693 ~ 32961444 (+)
ca5a ca5a,LOC104941612 coding downstream 175142 32964255 ~ 32988098 (+)
slc7a5 slc7a5 coding downstream 229282 33018395 ~ 33049917 (+)
zcchc14 zcchc14 coding downstream 442265 33231378 ~ 33295605 (+)
LOC120564416 NA non-coding upstream 995262 31789094 ~ 31791458 (+)
G89235 NA non-coding upstream 1251887 31534203 ~ 31534833 (+)
LOC120563988 NA non-coding upstream 1332198 31449506 ~ 31454522 (+)
G89222 NA non-coding upstream 1389139 31394671 ~ 31397581 (+)
G89214 NA non-coding upstream 1515592 31270068 ~ 31271128 (+)
G89506 fa2h non-coding downstream 735 32789848 ~ 32790103 (+)
G89507 NA non-coding downstream 1424 32790537 ~ 32791233 (+)
G89525 NA non-coding downstream 94810 32883923 ~ 32884234 (+)
G89526 NA non-coding downstream 95342 32884455 ~ 32884709 (+)
G89538 NA non-coding downstream 123170 32912283 ~ 32913022 (+)
LOC120564557 ccdc73 other upstream 159046 32593584 ~ 32627674 (+)
G89409 NA other upstream 290158 32490143 ~ 32496562 (+)
LOC120564413 NA other upstream 817231 31964413 ~ 31969489 (+)
LOC120564288 LOC106676433,LOC101470282,LOC102193107,LOC103142492,LOC103466241,LOC102310553 other upstream 1104561 31540981 ~ 31682159 (+)
G89164 NA other upstream 1704840 31081015 ~ 31081880 (+)
G89540 znf319,LOC104967809,LOC102797175 other downstream 116823 32905936 ~ 32911727 (+)
klhdc4 klhdc4,LOC104957904,LOC104953735 other downstream 296743 33085856 ~ 33115541 (+)
jph3b jph3,LOC103360672 other downstream 329088 33118201 ~ 33230110 (+)
G89811 LOC100698998 other downstream 1571371 34360484 ~ 34362377 (+)
G89813 NA other downstream 1592723 34381836 ~ 34421181 (+)

Expression


Co-expression Network