G89541 (pla2g15,LOC104948923,LOC108246911,LOC103379465,LOC107103093,LOC107103416)


Basic Information

Item Value
gene id G89541
gene name pla2g15,LOC104948923,LOC108246911,LOC103379465,LOC107103093,LOC107103416
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 32922382 ~ 32925940 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU120545
ccactatgttcacctgCTAGTTGCtaaccccctgttgaagatctctggtttaGGCAGAGTGGTTGGCaacagaaagaagagagaaggatGGAAACTAAATGTCTCCTTGGTAGGAAAGAAAATGATGcccatccatacacacacacacacacacatacgcacatgATCTTTGGGCCAGGAGTGGGCATATGGGAACAGCCAGGTGGTGGAGACAGCAGAACGTTGTTGGGAACGAATCTTCAACGGGCTGATCACGGGGATGCGGTTATTATCACCTAGGTGACCACACGGAGGGTCTTGGCCACCCCTGCCCATGGTGCTCCCAGAGCGATGAATGCTTTGATGTATCTGTCTTTCCAGGCCTGTGGCTGCTGGTTGAGGAAGTACAAGGTGTACATGTTGCCCATGCTGTGCGCGATGAGCACCACGGGCCCACCCGCCTTCTCCGACATCTCTTCAATCATCTTTTGCAGCGCCAGGAAATACTCTTTATTCTCATCTGATAGAGGACAAAAGATCGACATAGTAAATGAGTTAACAAAGCTGGCCCTGCT

Function

symbol description
pla2g15 Predicted to enable O-acyltransferase activity and calcium-independent phospholipase A2 activity. Predicted to be involved in ceramide metabolic process and phosphatidylcholine metabolic process. Predicted to be active in extracellular space and lysosome. Orthologous to human PLA2G15 (phospholipase A2 group XV).

NR:

description
PREDICTED: group XV phospholipase A2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120545 True 554 lncRNA 0.50 2 32922382 32925940

Neighbor

gene id symbol gene type direction distance location
usb1 usb1 coding upstream 3407 32913231 ~ 32918975 (+)
snrkb LOC107103095,LOC101069520,LOC107389226 coding upstream 162881 32737802 ~ 32759501 (+)
LOC120564018 NA coding upstream 185576 32719505 ~ 32736806 (+)
LOC120564017 NA coding upstream 204945 32705734 ~ 32717437 (+)
LOC120564016 LOC100694473,LOC102308285,LOC101472020,LOC103379534,LOC102194645 coding upstream 227992 32669278 ~ 32694390 (+)
uba2 uba2 coding downstream 20753 32946693 ~ 32961444 (+)
ca5a ca5a,LOC104941612 coding downstream 38315 32964255 ~ 32988098 (+)
slc7a5 slc7a5 coding downstream 92455 33018395 ~ 33049917 (+)
zcchc14 zcchc14 coding downstream 305438 33231378 ~ 33295605 (+)
tsnaxip1 NA coding downstream 508057 33433997 ~ 33444330 (+)
G89538 NA non-coding upstream 9360 32912283 ~ 32913022 (+)
G89526 NA non-coding upstream 37673 32884455 ~ 32884709 (+)
G89525 NA non-coding upstream 38148 32883923 ~ 32884234 (+)
G89507 NA non-coding upstream 131149 32790537 ~ 32791233 (+)
G89506 fa2h non-coding upstream 132279 32789848 ~ 32790103 (+)
G89546 NA non-coding downstream 17477 32943417 ~ 32984484 (+)
G89550 NA non-coding downstream 75320 33001260 ~ 33001589 (+)
G89553 NA non-coding downstream 81872 33007812 ~ 33008153 (+)
G89616 map1lc3b non-coding downstream 378786 33304726 ~ 33318892 (+)
G89659 NA non-coding downstream 463262 33389202 ~ 33392247 (+)
G89540 znf319,LOC104967809,LOC102797175 other upstream 10655 32905936 ~ 32911727 (+)
LOC120564557 ccdc73 other upstream 294708 32593584 ~ 32627674 (+)
G89409 NA other upstream 425820 32490143 ~ 32496562 (+)
LOC120564413 NA other upstream 952893 31964413 ~ 31969489 (+)
LOC120564288 LOC106676433,LOC101470282,LOC102193107,LOC103142492,LOC103466241,LOC102310553 other upstream 1240223 31540981 ~ 31682159 (+)
klhdc4 klhdc4,LOC104957904,LOC104953735 other downstream 159916 33085856 ~ 33115541 (+)
jph3b jph3,LOC103360672 other downstream 192261 33118201 ~ 33230110 (+)
G89811 LOC100698998 other downstream 1434544 34360484 ~ 34362377 (+)
G89813 NA other downstream 1455896 34381836 ~ 34421181 (+)
G89836 NA other downstream 1508149 34434089 ~ 34435317 (+)

Expression


Co-expression Network