nutf2 (nutf2)


Basic Information

Item Value
gene id nutf2
gene name nutf2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 33455496 ~ 33466411 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039807505.1
TGTACTTAATGACTACAATCCCCACAAACCACCGGGCCGGCTACGTCTTTGAGTGCGTGCCCTCGTAGGGCAGTAGACACTACTGCACTGTGTGATCGTGAAGCCGGCCTCGGCCTAGGCGTTGGTTAGAGTGTGTGTTGCAGGGTGATTCAGGATGGTGGACCAGCCTCTGTGGGAGCAGATAGGATCCAGCTTTGTGCAGCACTACTACCAGATGTTCGACTCCGATAGATCACAACTTGGATCCATATATATTGATGCATCATGTCTCACATGGGAAGGACAGCAGTTCCAGGGAAAAAGAGCAATTGTTGAGAAACTTGCTAGTCTACCCTTCACAAAAATAGCGCATAGTATAACAGCACAGGACCACCAGCCAACTCCAGACTGCTGCATCTTGAGTATGGTTGTAGGGCAGCTAAAAgcaGACGACGACCCCATCATGGGTTTCCATCAGAGTTTCATCCTGAAGAACATTAATGATGCATGGGTGTGCACCAATGACATGTTCAGGCTGGCCATTCATAACTTTGGCTAACCCCCGTCCCCACTCTGGTGGACAGGGGCGGCCATAGTGAAGGGCACCATGTGATGAAGTATGGAGGGAGTGGAAATAGGAGTTGAGgatggagagaagagagagagaactcaTCCCTCCCTCCTGCTGTCTCATTTACGTCTGCTTGACAAACAAGCAAACACCGGATTCTAGATGTCAATCACTGAACCTCATCCAGGTGGGTTTTCAGACCACCCCAGCCAGTAGAACTGCGACGTGTTTCTTTGCTGAGAGCCGGCCGACCAATCAGATGCCCCTGTCTGCCACTCCGCTGATCTGCATGACGCTGGGAGTCCCCCATTACAATATCTACACTCAAGCCACCAGAAAGACCGACGCCATTAACTCATGCTCTGCTATCCCCCTTCTTTACTTAATTCTAACCCATTCTACTCCACTGTTGACTCCACTGCTGTTAACTCAGTTCTTAGCACTGTTGTTGACCGGTTTGTAGATCCATGTTCAGAGTTGGCTTTATCAGTTCTGACTTCTTGTGTTATAAGTTGTTTTTAGATGCCACTTGTGTGTTACCTAAGTGTGTTTAACTGAGTTTTATCTTCCTTTACACAATTGTTAACTTTGTCGTGTTTCTTTCTCATGCCAGGTTTTGCTCTTGCAAACCAAAGAATCATGGACATAAAGTTTGACCATAATGTGTGATTGGCTCctgcattctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctcttgctccctccctccctctcacacacatctGGCAGTTAAACATGGACTGCAGCCACGATCGACAATAAAACCTGGACTTTTTTCTTAA
>XM_039807506.1
CTAGCTagtagcagctaacgttagttagcttaacgttacgttaactagctagctagccataACGTTACAAGAGCTTTTCCATTTTTAACGTTACCAAGCGGGCCTAGAAATAGCTATATGTCCCGTCGTGTGTGTTGCAGGGTGATTCAGGATGGTGGACCAGCCTCTGTGGGAGCAGATAGGATCCAGCTTTGTGCAGCACTACTACCAGATGTTCGACTCCGATAGATCACAACTTGGATCCATATATATTGATGCATCATGTCTCACATGGGAAGGACAGCAGTTCCAGGGAAAAAGAGCAATTGTTGAGAAACTTGCTAGTCTACCCTTCACAAAAATAGCGCATAGTATAACAGCACAGGACCACCAGCCAACTCCAGACTGCTGCATCTTGAGTATGGTTGTAGGGCAGCTAAAAgcaGACGACGACCCCATCATGGGTTTCCATCAGAGTTTCATCCTGAAGAACATTAATGATGCATGGGTGTGCACCAATGACATGTTCAGGCTGGCCATTCATAACTTTGGCTAACCCCCGTCCCCACTCTGGTGGACAGGGGCGGCCATAGTGAAGGGCACCATGTGATGAAGTATGGAGGGAGTGGAAATAGGAGTTGAGgatggagagaagagagagagaactcaTCCCTCCCTCCTGCTGTCTCATTTACGTCTGCTTGACAAACAAGCAAACACCGGATTCTAGATGTCAATCACTGAACCTCATCCAGGTGGGTTTTCAGACCACCCCAGCCAGTAGAACTGCGACGTGTTTCTTTGCTGAGAGCCGGCCGACCAATCAGATGCCCCTGTCTGCCACTCCGCTGATCTGCATGACGCTGGGAGTCCCCCATTACAATATCTACACTCAAGCCACCAGAAAGACCGACGCCATTAACTCATGCTCTGCTATCCCCCTTCTTTACTTAATTCTAACCCATTCTACTCCACTGTTGACTCCACTGCTGTTAACTCAGTTCTTAGCACTGTTGTTGACCGGTTTGTAGATCCATGTTCAGAGTTGGCTTTATCAGTTCTGACTTCTTGTGTTATAAGTTGTTTTTAGATGCCACTTGTGTGTTACCTAAGTGTGTTTAACTGAGTTTTATCTTCCTTTACACAATTGTTAACTTTGTCGTGTTTCTTTCTCATGCCAGGTTTTGCTCTTGCAAACCAAAGAATCATGGACATAAAGTTTGACCATAATGTGTGATTGGCTCctgcattctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctcttgctccctccctccctctcacacacatctGGCAGTTAAACATGGACTGCAGCCACGATCGACAATAAAACCTGGACTTTTTTCTTAA

Function

symbol description
nutf2 Predicted to be involved in protein import into nucleus. Predicted to be part of nuclear pore central transport channel. Human ortholog(s) of this gene implicated in diabetic retinopathy. Orthologous to human NUTF2 (nuclear transport factor 2).

NR:

description
PREDICTED: nuclear transport factor 2

GO:

id name namespace
GO:0006810 transport biological_process
GO:0005622 intracellular anatomical structure cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039807505.1 True 1412 mRNA 0.48 5 33455496 33466411
XM_039807506.1 False 1409 mRNA 0.46 5 33456049 33466411

Neighbor

gene id symbol gene type direction distance location
tsnaxip1 NA coding upstream 11166 33433997 ~ 33444330 (+)
zcchc14 zcchc14 coding upstream 159891 33231378 ~ 33295605 (+)
slc7a5 slc7a5 coding upstream 405579 33018395 ~ 33049917 (+)
ca5a ca5a,LOC104941612 coding upstream 467398 32964255 ~ 32988098 (+)
uba2 uba2 coding upstream 494052 32946693 ~ 32961444 (+)
edc4 edc4 coding downstream 1745 33468156 ~ 33508852 (+)
nrn1la nrn1l,LOC103481208,LOC102228515 coding downstream 45014 33511425 ~ 33630572 (+)
LOC120564292 NA coding downstream 217607 33684018 ~ 33685402 (+)
pskh1 pskh1 coding downstream 229632 33696043 ~ 33707365 (+)
mbtps1 mbtps1,LOC102792102 coding downstream 247140 33713551 ~ 33756503 (+)
G89676 NA non-coding upstream 2059 33453074 ~ 33453437 (+)
G89664 ranbp10 non-coding upstream 58511 33396299 ~ 33396985 (+)
G89659 NA non-coding upstream 63249 33389202 ~ 33392247 (+)
G89616 map1lc3b non-coding upstream 136604 33304726 ~ 33318892 (+)
G89553 NA non-coding upstream 447343 33007812 ~ 33008153 (+)
G89723 NA non-coding downstream 242839 33709250 ~ 33710209 (+)
G89722 NA non-coding downstream 244384 33710795 ~ 33712275 (+)
G89794 NA non-coding downstream 671977 34138388 ~ 34140454 (+)
G89812 NA non-coding downstream 878843 34345254 ~ 34419992 (+)
G89804 NA non-coding downstream 885933 34352344 ~ 34399986 (+)
jph3b jph3,LOC103360672 other upstream 225386 33118201 ~ 33230110 (+)
klhdc4 klhdc4,LOC104957904,LOC104953735 other upstream 339955 33085856 ~ 33115541 (+)
G89540 znf319,LOC104967809,LOC102797175 other upstream 543769 32905936 ~ 32911727 (+)
LOC120564557 ccdc73 other upstream 827822 32593584 ~ 32627674 (+)
G89409 NA other upstream 958934 32490143 ~ 32496562 (+)
G89811 LOC100698998 other downstream 894073 34360484 ~ 34362377 (+)
G89813 NA other downstream 915425 34381836 ~ 34421181 (+)
G89836 NA other downstream 967678 34434089 ~ 34435317 (+)
LOC120563677 gnao1,LOC103367675,LOC108249535,LOC107660763,LOC100693875 other downstream 1381152 34847563 ~ 34990412 (+)
G90142 NA other downstream 2318283 35784694 ~ 35785416 (+)

Expression


Co-expression Network