G89804


Basic Information

Item Value
gene id G89804
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 34352344 ~ 34399986 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU120872
ACATGTTGAATACAATGTAAGAAATACATGTGTTGAATACAATATAACTGTTACATAACGTAGAACTCACGTTGCAGATTCTTGTTTTCACGCTTCATggtctccagctgatccagagatTCCTCATAAGAGTTCTTCATCTTGAACAGCTCAGTGCTGAGAGAACGAGTCTCCTTCTGTGCTCCCTCGAGCTCTGCCTGACCCTCCTCGTACTTCTGTTTCCACTCTGCCAACACCTGAATAACACGATTGGTTATCAAtatgaggaaaaataaa

Function

NR:

description
vacuolar protein sorting-associated protein 72 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120872 True 276 lncRNA 0.41 2 34352344 34399986

Neighbor

gene id symbol gene type direction distance location
LOC120563662 LOC104959125 coding upstream 55780 34284815 ~ 34296564 (+)
LOC120563664 LOC104959125 coding upstream 117489 34217079 ~ 34234855 (+)
syt19 LOC102786851 coding upstream 145101 34196204 ~ 34207243 (+)
calb2a calb2,LOC104951234,LOC104929127,LOC100698459,LOC102197725 coding upstream 179304 34144101 ~ 34173040 (+)
pnp6 LOC104929128,LOC107103415,LOC103363725,LOC106937206 coding upstream 214558 34122575 ~ 34137786 (+)
nlrc5 NA coding downstream 51809 34451795 ~ 34523324 (+)
cpne2 cpne2 coding downstream 125025 34525011 ~ 34591799 (+)
hsf4 hsf4,LOC102290593 coding downstream 384343 34784329 ~ 34811320 (+)
cbfb cbfb coding downstream 609595 35009581 ~ 35054439 (+)
phaf1 clg7h16orf70,LOC101484474 coding downstream 662304 35062290 ~ 35089344 (+)
G89794 NA non-coding upstream 211890 34138388 ~ 34140454 (+)
G89722 NA non-coding upstream 640069 33710795 ~ 33712275 (+)
G89723 NA non-coding upstream 642135 33709250 ~ 33710209 (+)
G89676 NA non-coding upstream 898907 33453074 ~ 33453437 (+)
G89664 ranbp10 non-coding upstream 955359 33396299 ~ 33396985 (+)
G89816 LOC103376141,LOC100698998 non-coding downstream 35757 34435743 ~ 34436871 (+)
G89840 NA non-coding downstream 195026 34595012 ~ 34596295 (+)
G89841 NA non-coding downstream 196562 34596548 ~ 34612091 (+)
LOC120563685 NA non-coding downstream 241437 34641423 ~ 34643222 (+)
G89911 NA non-coding downstream 312424 34712410 ~ 34717002 (+)
jph3b jph3,LOC103360672 other upstream 1122234 33118201 ~ 33230110 (+)
klhdc4 klhdc4,LOC104957904,LOC104953735 other upstream 1236803 33085856 ~ 33115541 (+)
G89540 znf319,LOC104967809,LOC102797175 other upstream 1440617 32905936 ~ 32911727 (+)
LOC120564557 ccdc73 other upstream 1724670 32593584 ~ 32627674 (+)
G89409 NA other upstream 1855782 32490143 ~ 32496562 (+)
G89836 NA other downstream 34103 34434089 ~ 34435317 (+)
LOC120563677 gnao1,LOC103367675,LOC108249535,LOC107660763,LOC100693875 other downstream 447577 34847563 ~ 34990412 (+)
G90142 NA other downstream 1384708 35784694 ~ 35785416 (+)
anapc13 anapc13 other downstream 2116025 36516011 ~ 36517921 (+)
mt2 NA other downstream 2130987 36530973 ~ 36531996 (+)

Expression


Co-expression Network