G89911


Basic Information

Item Value
gene id G89911
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 34712410 ~ 34717002 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU121032
gcaggtttgataggtcgagttgcagcaagaaagccattgctaagacgtcagaataagaaaaagaggcttgcctgggccaaatgaaatcttcggttcatcacgcaggatttttgtacgccgtcgagtaggcgaaaggatggttcctcagtttGTGACATCAACTGTTCCTCTATAGTTGACATCAActatagaggaagattgacagctgtAGTACAGACAACCTGTTaatgctgtgtgggctagccagaccctcctccgcagacACCAGGGTCATCGTTCCCGGccacgtcctgctgcgtccgccgcgtccacccatgctctgcagcgccacgttacatcccgcaacgccccgctgtgatgttcatatgcacagagtagtcatgATCcagtataggagactgcactactcagtatgacacgatgtgccctgctatgacatgaacttccacaatga

Function

GO:

id name namespace
GO:0009072 aromatic amino acid family metabolic process biological_process
GO:0006520 cellular amino acid metabolic process biological_process

KEGG:

id description
ko00360 Phenylalanine metabolism
ko04610 Complement and coagulation cascades

RNA

RNA id representative length rna type GC content exon number start site end site
TU121032 True 454 lncRNA 0.51 2 34712410 34717002

Neighbor

gene id symbol gene type direction distance location
cpne2 cpne2 coding upstream 120611 34525011 ~ 34591799 (+)
nlrc5 NA coding upstream 189086 34451795 ~ 34523324 (+)
LOC120563662 LOC104959125 coding upstream 415846 34284815 ~ 34296564 (+)
LOC120563664 LOC104959125 coding upstream 477555 34217079 ~ 34234855 (+)
syt19 LOC102786851 coding upstream 505167 34196204 ~ 34207243 (+)
hsf4 hsf4,LOC102290593 coding downstream 67327 34784329 ~ 34811320 (+)
cbfb cbfb coding downstream 292579 35009581 ~ 35054439 (+)
phaf1 clg7h16orf70,LOC101484474 coding downstream 345288 35062290 ~ 35089344 (+)
LOC120564296 NA coding downstream 421401 35138403 ~ 35152229 (+)
LOC120564717 NA coding downstream 471843 35188845 ~ 35203022 (+)
LOC120563685 NA non-coding upstream 69188 34641423 ~ 34643222 (+)
G89841 NA non-coding upstream 100319 34596548 ~ 34612091 (+)
G89840 NA non-coding upstream 116115 34595012 ~ 34596295 (+)
G89816 LOC103376141,LOC100698998 non-coding upstream 275539 34435743 ~ 34436871 (+)
G89809 LOC104955241 non-coding upstream 328655 34382755 ~ 34383755 (+)
G89941 NA non-coding downstream 66905 34783907 ~ 34798318 (+)
G89942 NA non-coding downstream 97401 34814403 ~ 34814926 (+)
G89950 NA non-coding downstream 215898 34932900 ~ 35046655 (+)
G89960 NA non-coding downstream 394310 35111312 ~ 35126141 (+)
G89969 NA non-coding downstream 449736 35166738 ~ 35167110 (+)
G89836 NA other upstream 277093 34434089 ~ 34435317 (+)
G89813 NA other upstream 291229 34381836 ~ 34421181 (+)
G89811 LOC100698998 other upstream 350033 34360484 ~ 34362377 (+)
jph3b jph3,LOC103360672 other upstream 1482300 33118201 ~ 33230110 (+)
klhdc4 klhdc4,LOC104957904,LOC104953735 other upstream 1596869 33085856 ~ 33115541 (+)
LOC120563677 gnao1,LOC103367675,LOC108249535,LOC107660763,LOC100693875 other downstream 130561 34847563 ~ 34990412 (+)
G90142 NA other downstream 1067692 35784694 ~ 35785416 (+)
anapc13 anapc13 other downstream 1799009 36516011 ~ 36517921 (+)
mt2 NA other downstream 1813971 36530973 ~ 36531996 (+)
wfdc1 wfdc1,LOC102778323 other downstream 3305375 38022377 ~ 38034694 (+)

Expression


Co-expression Network