LOC120564479


Basic Information

Item Value
gene id LOC120564479
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 31041011 ~ 31052003 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640110.1
gctattgttattttttgcatttcataTTATTGCTGTATATCTGCTAAATTTGTCTTTGTTTAGGAATACTTGTCTACATCACAGGTTTACATCTTCACGatGCCGAGAAAAGGGAAGAGGTCGCAGGCCCAAAAAGTGCGTTGGAGAAGGCTTGATTTGGCAGATCCAGTCCAGATCAGCCCACCGGACACCAGACCACAAACACCACCACAACACAGAACCTTCTGGAAGTCGGATAATGAACCTTCCTGCTCCAGTTCTCCAGCTAAAAAGATGGATGAAACACCTCCACCAGCGAGACCTTTCTGGGCAAAGGACAACCCACCCAGTCCCTCATGTTCTCCAGCAACAAAGTCCCCAAAACACAGACACCACCACAACCAAGAAGCTTCTGGATAATGGATGAGGCAGCTTCTCACTCTCCATCTCAACAGATTCCAAAACCACAGAGAGTGCCACGGTCAAGAAGCTACTGGATTCCCGATGATGCACCCTCCTGCTCTCGTTATCCAGCTAAAAAGAGATAGATGACTGCCAGGGGGAGCCAGTTCTTCCTTCCGCCAACATTTTACAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640110.1 True 574 lncRNA 0.47 6 31041011 31052003

Neighbor

gene id symbol gene type direction distance location
LOC120563346 LOC106024097,LOC105418589 coding upstream 102809 30932443 ~ 30938202 (+)
LOC120564223 parva,LOC103379681 coding upstream 323856 30683862 ~ 30717155 (+)
LOC120563894 NA coding upstream 456781 30481941 ~ 30584230 (+)
LOC120563903 NA coding upstream 614304 30426495 ~ 30426707 (+)
LOC120563902 NA coding upstream 835610 30202226 ~ 30205401 (+)
LOC120563984 syt9,LOC108243479,LOC103466244,LOC105929741,LOC107389215,LOC106536968 coding downstream 138063 31190066 ~ 31499894 (+)
LOC120563983 NA coding downstream 330308 31382311 ~ 31385585 (+)
LOC120564412 spon1,LOC107094903 coding downstream 685720 31737723 ~ 32220761 (+)
LOC120563341 NA coding downstream 1510164 32562167 ~ 32565265 (+)
LOC120563342 LOC106532362 coding downstream 1513256 32565259 ~ 32566745 (+)
LOC120563430 NA non-coding upstream 71 31040533 ~ 31040940 (+)
G89152 NA non-coding upstream 33916 31005610 ~ 31007095 (+)
LOC120564546 NA non-coding upstream 50286 30989670 ~ 30990725 (+)
G89147 NA non-coding upstream 55147 30985459 ~ 30985864 (+)
G89146 NA non-coding upstream 55892 30984680 ~ 30985119 (+)
G89200 NA non-coding downstream 104369 31156372 ~ 31156820 (+)
G89207 NA non-coding downstream 191196 31243199 ~ 31248324 (+)
G89214 NA non-coding downstream 218065 31270068 ~ 31271128 (+)
G89222 NA non-coding downstream 342668 31394671 ~ 31397581 (+)
LOC120563988 NA non-coding downstream 397503 31449506 ~ 31454522 (+)
LOC120564323 LOC100693668,LOC101468938,LOC102215274,LOC108243483 other upstream 151314 30752581 ~ 30889697 (+)
LOC120563900 NA other upstream 417028 30609213 ~ 30623983 (+)
LOC120563901 LOC107562792 other upstream 559976 30436920 ~ 30481035 (+)
G88950 NA other upstream 924760 30113189 ~ 30116251 (+)
LOC120564285 NA other upstream 930372 30103821 ~ 30110639 (+)
G89164 NA other downstream 29012 31081015 ~ 31081880 (+)
LOC120564288 LOC106676433,LOC101470282,LOC102193107,LOC103142492,LOC103466241,LOC102310553 other downstream 488978 31540981 ~ 31682159 (+)
LOC120564413 NA other downstream 912410 31964413 ~ 31969489 (+)
G89409 NA other downstream 1438140 32490143 ~ 32496562 (+)
LOC120564557 ccdc73 other downstream 1541581 32593584 ~ 32627674 (+)

Expression


Co-expression Network