trnaw-cca_9


Basic Information

Item Value
gene id trnaw-cca_9
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 35210860 ~ 35210931 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_382
GACTCTGTGGTGCAACGGTAGCATGTCTGACTCCAGATCAGAAGGTTGCATGTTCAAATCATGTCAGGGtca

Function

GO:

id name namespace
GO:0005198 structural molecule activity molecular_function
GO:0005212 structural constituent of eye lens molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_382 True 72 tRNA 0.49 1 35210860 35210931

Neighbor

gene id symbol gene type direction distance location
LOC120564717 NA coding upstream 7838 35188845 ~ 35203022 (+)
LOC120564296 NA coding upstream 58631 35138403 ~ 35152229 (+)
phaf1 clg7h16orf70,LOC101484474 coding upstream 121516 35062290 ~ 35089344 (+)
cbfb cbfb coding upstream 156421 35009581 ~ 35054439 (+)
hsf4 hsf4,LOC102290593 coding upstream 399540 34784329 ~ 34811320 (+)
setd6 LOC102793369 coding downstream 16088 35227019 ~ 35238037 (+)
si:ch211-216l23.2 LOC104955245,LOC103371405,LOC106964371 coding downstream 66335 35277266 ~ 35294136 (+)
znf423 znf423 coding downstream 127961 35338892 ~ 35507284 (+)
si:ch211-212o1.2 LOC103358434,LOC100695703,LOC102310624 coding downstream 301453 35512384 ~ 35586541 (+)
cbln1 cbln1,LOC104949597 coding downstream 448782 35659713 ~ 35693705 (+)
G89969 NA non-coding upstream 43750 35166738 ~ 35167110 (+)
G89960 NA non-coding upstream 84719 35111312 ~ 35126141 (+)
G89950 NA non-coding upstream 164205 34932900 ~ 35046655 (+)
G89942 NA non-coding upstream 395934 34814403 ~ 34814926 (+)
G89941 NA non-coding upstream 412542 34783907 ~ 34798318 (+)
G90125 NA non-coding downstream 483976 35694907 ~ 35695485 (+)
G90126 NA non-coding downstream 485074 35696005 ~ 35696764 (+)
G90131 NA non-coding downstream 486566 35697497 ~ 35697701 (+)
G90138 NA non-coding downstream 560065 35770996 ~ 35771401 (+)
G90151 NA non-coding downstream 702140 35913071 ~ 35913280 (+)
LOC120563677 gnao1,LOC103367675,LOC108249535,LOC107660763,LOC100693875 other upstream 220448 34847563 ~ 34990412 (+)
G89836 NA other upstream 775543 34434089 ~ 34435317 (+)
G89813 NA other upstream 789679 34381836 ~ 34421181 (+)
G89811 LOC100698998 other upstream 848483 34360484 ~ 34362377 (+)
jph3b jph3,LOC103360672 other upstream 1980750 33118201 ~ 33230110 (+)
G90142 NA other downstream 573763 35784694 ~ 35785416 (+)
anapc13 anapc13 other downstream 1305080 36516011 ~ 36517921 (+)
mt2 NA other downstream 1320042 36530973 ~ 36531996 (+)
wfdc1 wfdc1,LOC102778323 other downstream 2811446 38022377 ~ 38034694 (+)
G90583 NA other downstream 2843578 38054509 ~ 38055564 (+)

Expression


Co-expression Network