G99330 (LOC104931916,LOC103368774,LOC104955640)


Basic Information

Item Value
gene id G99330
gene name LOC104931916,LOC103368774,LOC104955640
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 29767067 ~ 29772402 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU133969
GGCCTAGTTAtcatacacctatgttaaaaaaaaaaaaatatgtcattCATAAGCAGTATGTTGAATGAACTGGTGAAGTGAAGTATAGGAGCACTGTGTCTTATACTGcttcatgtattttatttttaccaaaCAGCAGGAGACAATTCAGTGATTTGCATGTTTAGCTGTTCAAATCTGTCATTTTTGGAATACAAACTTGTATACCaaattgtaaaaatgtaatcagttctgaaaaaaacactgaatgtaaTGTGTATATTGGTCAAAATGTTTAGAAACCCCATTCTTAACCCTGTTTCCTAGTTGTGATGTGTTTCTAAGCAGTAACAACACTAAGTAAGAAGATTGTATTGTATGTACACTGTTGTTTAACAATGgataaattaatttaaacataaaTGGCGGGTATTTCAGGCATCAAGATTTAACTGTACAACCTCCAAATATGCTCTTGGTGCAAAAGCAGCTTTTGATTCATTTAGCACATTTTAAAACCAGGTTCACAAAGTGCTGTGTAAAGAGAAGAACAGATAAAAGTCAATGagataatatatacatacaaattacacaCAAAATGCATGGAAAATACAGTGTTTACAAGAATAAAACAATTGTGAGCAAAAGTACAACTAAAAAACATACTTGTGGGTTGGCTGTacacaaaaaaggaaacaatGTACTATCTATTCCTTTGAAAAAATCAACTGTATCAAAAATAATGATACCGCTGAGTGATAATGAACATGAATCAAGACTTTTCAAGAAGTAGTGACAAGGTTTGGATGGGAACCTCATCATGTTGGTGCGTAAAAGTACAAGGTATATTCAAATCAGAGTGCATAAGGTTAATAATACTAGGTTATACCTACACAgttctttaatttgtttatgcAGCATATGTCATTGTTTAAAAGGTGCTCAAAGTTTAAAGGTGCTTTTCTTATCATTCACAGAGAAATTAAATGTGTCAATACAGGAGCAGTTGGCAGCAACAGGCACCCGGGGACCACCTCCAGTCTTTTTACCTGTGCCTTTTGGTCATAGGGCACTGACAGCAGCACTAACCTAGACAAGGGTGGCAGTTTTGATCGTGTGACCATAACACGTGACAGCTCTATTTAATGTTGCGAAACGGTCGTAGTTGTAAACACGtgtttaacgttgtgaaacggaaCTGCTTGGGTAAGTTTAGGcaaaaaactacttggttagggttaggaaaagatcatggatTGGGTAAATCCGTAACAAAGTTGGTTTACCTAAAGAAAGTCAacattgacttttggtttcccGTGGCACACAAACAGCTGTCTCCTGGGTGAGAGTCCTgggtttgtttgacccatccaccaccccaacccacTTTGGCACTcttaagcttgatttatggttgtgcggaggctccaagcagagctttcgccgtagcctacgtaagtggcctgaattTTATACTTGTgcattggtgtgtgcgtcgatctctttaggGCTGGCATGTGTGTGGGGAGCGTGTGGTAGAGCCAGTGAGAGAGGGACGCGATAAGCTTCAGAGCGAGTGGCGACTCTAGAGGCATAGTGGGAGACACAAAGTGTCTCCCcgtgtgctttctgaccacagtcggaaatctgtagcaggaaaagttaaccttctccttgatttcatgttgtttatggagaaggagaaccaggaaatgagtagacagaaatgcaacgctaccaagctgCGGCGGAGCGTCACAgtgaagttacattttttgagaggtgcacgtcaggctacggcgtagggtccggcgtagggtCGGTATCTACGTACGTAGCTACAGCGTTGATTTAACGTAGAAGCACAAATTGGCTTTTAGACTACATCACCTGATTTTCGCCTTTACTCCCACCATGATTACTATAGCCACTAGacataaacataacataaatatGGGTCATAATAGGCTGCTTGCACAATCTACCTATACGGCTTTCTTTGAGAGGACGGTCTGATATCACCAAATTGCGAAGCTGGCAATTGGATCTTgagtagaattttttttttttaaggggtcagttcacccaaataaCAGAACAGAAACAACATATTTGATAACATAGAAACATATTTGCTTACTATATCTCGCCATCATCCTCAAGTTTTGAAATATCCGTACTTAAGATTTCTTGCCTCCATCCCAATTCAATTGAGGGGAATGGCATTTTGTGCATCCTTGAACATTTCAACAGCAACATCTTCTTCCAGAATGACCCAGTCACTCTGGATAATCAACAAACTTGCTGTAAACAGGTTTCACTAAGAATATTTGATAAAATGTAGAAATAATGCTGttgaatcatttcaaacatGATATCCTGTTGCCGTGAGGTGCAGACCAAAATCTACTAAGATCAATTTTATTTGGGTGGAGGCAGAAATTTCTGAACTAACTGCATGGTTAGATACCATTACGGGAAAGgtgtttttgtaatttgagTAAACTGTCCCTTTTAAGTTGAGGTCAATTAGGTGTATCTAGTTAATGTAAATACAATTAATTTAAATCACAAAGATAAAAAGGAGGGTTGTTTCAAAAGGATAGAAATGTCCATAGATCCACTGTAGACATGACACCAGCCATGATCAATCCTAGAGTTCCTCTAAATTTCTCCAGTTGTACCGACCTTGTATGTGTTGTGGTATGTTCATTTCATAAGTTACCAATACATCATGAAGTGCACCAGTACTGTACCATGTAAATACAGTTTCAAATTTTTAAAAGACTTATTTACACCCAAGATGAAATGCCAGACATTTTATGCCACGTAGGATGTGACTACCGTCCATCACTTAGACATTTACACCCATTTGGAAAAGAAGCACTAGATTCCTGATTAATGCTCTCTTTTGCCTCCATGGGGAGCGTGTCAAAGAGATGATCCTCCACAATCAGGCAGCTCCTGTGCAGGAGGCTGCATTGACCAAGCTGAGCCGGGAGACGATCCAGACAGTTTCCCTTCAGTTCCAAATGTGTCAGCTGTGACAGTTGGCCAATTTTCTCTGGAATGGAAGAGATACAGTTGTGACCGAGACATAAGGTCCTCAGTTTGTTGCATTTGAACAGTTGCTTAGGAACTACCTCGACTTTGTTGCCGGTAATGGCAAAATGTTGGAGGTTCTGCAGAAAGCCAGCCTCCAGTGGTATTACCACTATAGAGTTGTGGCTAACATCGAGGTACCTCAACTTGGGAAGGGTGAATAACGATGAGGGTAGAGACTCAAGCTTGTTGTGTGAGAGATAGAGCGACTCAAGGTTTTTGACATGGCTAATTGACAATGGAATGGAGATGATTTTATTGTGCCAAAGTTTGAGGCACGTCAGTCGCTTAAGGTGCTGGAAGCTGATGATCTCCTCAATGGTACGAATGTTGTTGGATTTTAGATCAAGTTCCTGAAGGTTGTTCAAACTGAAAATGGCATGGGGGATTCGCTCCAGCTCACAGTTAAGAAGCTCCAGTTCGGCGAGATTCATTATTTTCTTCAAACTATTCAGCACTAAGAGCTTTGTACCATCATTATGAATGACCAACTTGATCAGATGTGGAGACAGATCCGTTATGTTTGTCGGGATCTTTGTTAGGTTGCTTTTGAGATGCAGAATATTTAAGTGCCTGAGGTCTCGCAGAGACTCGAGTCCgatcattttgttgttttcagagTTCAGGTTACCAACCAAGTACAGTTCCCTTAAATTTTTCAACAAGTATACCCAGCTTGGAATCTCAGCAACATCTGTGAATTTGACATGAAGGCACCGGAGATGATCACGCAGAAAAATGAAAGCAGTCTGTTCAACTTTGGCTGGACAGTGATACAAGTGCAGCTCCTGGAGGTTTATCATTTGTGAGATTTTAGCTGTTATCCTGGCCTCTGGGATTAATTCTAGTTTAAGGATTTCCAAATCAGTGAGATCAAACACAGCATCTGGCATCCCGGAGAGCATAAAAAGATGGAGTTCCAACTTTTCTTGAGAATTACGCGTCACATGCTGCCGCAACTTCTCAAAGGTCCACTCATGGTTCAGGCTGATCTCCCGAAGTTTGTTCTCACTCACCTCAGAGAGAAAAACACCAAAACGCTTTGAATACAGCTGGTCATACTGATCGACCATGTGGAGGAGGAATGCAAAGTCATTCTTAACATCTGGAATATCACTGAAGCTGCTCTCCTCTCTGACTTTTTCAAAGGAATACTCCTTAAGTGGTCTCCGAAAAAGCCAGAACAGTGTGTATATACAGATTATGCCATAAACGCATATAAGAGCAATATAACTAACAAGGAGTTTCTTTAACATGAACGCCATGTTGTGTGTACAGTGGAACTTTGTGTATCCAGTCAAATGCTTTATTTCAGGCTCACACACATGGTCAAATTCTATAGAGGCAACAAAAGTCATCGTGTAGCAGAGGATCAAAATGAACTTAACTGTTTTGATGACTGTCTGAATGGCATACAGCCTGTAAATCAAGTCACTGTCTTCCACATGGGCACGGAATTTCCGGACTTTTTCAAACAGGGCTTTTGCTTGCTCACCATCTTTCTTGTCCAGAATGGTCATGGCGGGAACTTCACTCACAAGCTTTTCAGCAGAAAACGTGAGCCCAGGTTTAGTCAGCATTGGGGCGGACTGATTTGGACTCCCCTCCtcgctgcatgttgacagatgCTTCAGGAGGGAGGAGGCCCCAGCCAGTCTCTGCTTATTCTCCTCCGAGTCCTCGCAGGCAGTCTCGGACAGTGCTTTGGTAGTCCAAGGCGATTCGAAACATTTTCCCAGTATCGAAACAAAATGTTCTATTTTGGAACTTGTCTTTGGGTACTTGAACCAGAAGTTGCTACTGACCATTAATACAATGGTGTGAATTAGAGCCAGGTATGGGAAATATTTGGAATACCAAGGAAGGGCAACATGGTAGCACATCTGATTGACAAAAACATACTGCTGAAAATCCAGCTTAGTCCTGACACCTGTAGGCTGAGGCTGCCCAAGAGTACCCGACTGCGTGAAGTGAACTGTAGGGGCGATGCTATCAGGAGGCCTTCTAGCCATTAAAGGAGCGGCTTGCTCTCCAACGGCGCTTTCTTTGTTCCATAAACTATCAACTATCTCTGGGGGTTGGGGTCCTAAAAAGCCCCCAGCCCCCTCTGGAGTTTGTTCCATAATGGGAAGACAAACCACTTGGTCCTTAGTTAACTGCATCGTTCCAGAAAATATGGCCAACATCAACATGACAATACCAAGATAATCCATGAAGACATCCCACCATGGTTTCAGTATTCGATAAGTCGG

Function

NR:

description
PREDICTED: volume-regulated anion channel subunit LRRC8D

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU133969 True 5336 lncRNA 0.41 1 29767067 29772402

Neighbor

gene id symbol gene type direction distance location
LOC120565715 kyat3,LOC102191994,LOC100694678,LOC102313413 coding downstream 36191 29706680 ~ 29730876 (-)
LOC120564876 NA coding downstream 63298 29696590 ~ 29703769 (-)
farp2 farp2 coding downstream 727538 29001524 ~ 29039529 (-)
boka bok,LOC103374845 coding downstream 775476 28979773 ~ 28991591 (-)
angptl1a angptl1 coding downstream 913480 28836582 ~ 28853587 (-)
barhl2 barhl2,LOC102777546 coding upstream 196723 29969125 ~ 29972945 (-)
LOC120565063 LOC104921729,LOC102790944,LOC101466253,LOC104946874 coding upstream 541400 30313802 ~ 30322363 (-)
gfi1ab gfi1 coding upstream 564265 30336667 ~ 30343004 (-)
evi5b evi5 coding upstream 571983 30344385 ~ 30389254 (-)
LOC120565664 fam69a,LOC108246251 coding upstream 630734 30403136 ~ 30413927 (-)
G99325 NA non-coding downstream 17068 29749482 ~ 29749999 (-)
G99323 NA non-coding downstream 23687 29743097 ~ 29743380 (-)
G99319 NA non-coding downstream 28383 29738449 ~ 29738684 (-)
G99315 NA non-coding downstream 35715 29731010 ~ 29731352 (-)
G99314 NA non-coding downstream 38326 29726601 ~ 29728741 (-)
G99438 kiaa1107,LOC103368715 non-coding upstream 529715 30302117 ~ 30310995 (-)
G99447 NA non-coding upstream 624929 30397331 ~ 30398149 (-)
G99446 NA non-coding upstream 626439 30398841 ~ 30403012 (-)
G99450 ccdc18 non-coding upstream 655406 30427808 ~ 30428188 (-)
G99464 NA non-coding upstream 681192 30453594 ~ 30454369 (-)
G99324 lrrc8c other downstream 8853 29753225 ~ 29758214 (-)
LOC120566080 LOC103369405 other downstream 193907 29471572 ~ 29573160 (-)
atg4b atg4b,atg4a other downstream 788623 28966406 ~ 28978444 (-)
LOC120565123 ipo13,LOC103354180,LOC102296374,LOC100704490,LOC101476741,LOC104925999,LOC102781747,LOC102197282 other downstream 1129988 28601332 ~ 28637079 (-)
G98938 serbp1,LOC102303841,LOC104930792,LOC105932454,LOC103463733,LOC106917776 other downstream 1497342 28199362 ~ 28269725 (-)
znf644b LOC102209721 other upstream 267521 30039923 ~ 30078079 (-)
tgfbr3 tgfbr3 other upstream 334367 30106769 ~ 30191850 (-)
G99587 NA other upstream 1111873 30884275 ~ 30885171 (-)
c9h19orf44 NA other upstream 1173807 30946209 ~ 31011684 (-)
G99811 NA other upstream 1829461 31601863 ~ 31608734 (-)

Expression


Co-expression Network