LOC120565573


Basic Information

Item Value
gene id LOC120565573
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 1968185 ~ 1972613 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039811458.1
CAGTGTTCCTGTTTTACCTTAGACTGACTTcagaggcctggactacgaagcaagatttggggttaacgagACCTCAGATCAGAAGATGAGTGattgggaggaagaggaggatggagagtCTGGCTGTCTGTCTATGAAGAGTGACCGGTCCAGAGATCCTCCTCCAGACTTCAGTAATgaacctggaccctcagacacaaaAGAGAGGAGTGATGTTTCTGAGGAGGAGCAGTTGTctagaaccagaaccagaactgGACtgcagacagccaatcagaacaacTCTGAACAAAtgaATGTTGGTCGTCAGAAACATAAGATCAGACTGAAGGAGACATTTGAACGTGTGACTGAAGGAGCTGAAACAGGAAGTAGAACCCTACTCAACAGGATCTACACTGTCCTCTACATCATAGAGGGACAGAGTGAAGAGGTTAATACCCAACATGAGGTGAGGCAGCTTGAGACAGCTTCCAAGAAGAAGATCCTCCATGACTCTCCAATCAAGTGCTGTGACATCTTTAAAGCCTTACCTGAtcaacagaaacacatcagaGTGGTTCTGATGATCGGCGTCGCTGGCGTTGGAAAAACCTTCTCAGTGCAGAAGTTCTGTCTGGACTGGGCCGAGGGTTTGGAGAACCAAGATATCAGTCTGGTGATTCCTCTTTCCTTCAGGGAGCTGAACTTGATCAAAGATGAGCAGTACAGTCTTCTGGAGCTGCTCCGTGTTTTCCATCCAACATTACAGGAGGTCCCAGCAGAGCAGCTCGCTGGCTCTAAAGTTCTCTTCATCTTTGACGGCCTGGATGAAAGCAGACTTTACCTGGATTTCAACAACAATGAGGCTGTTTCTGATGTCACACAGAAGTCATCAGTCAACGTGCTGTTGACAAACCTCATCCAGGGGAAGCTGCTTCCCTCGGCTCTCGTCTGGATAACTtcccgacctgcagcagccaatcagatccctcctgcgtGCGTTGACAGGGTAACAGAAGTACAAGGCTTCACTGATgcccagaaggaggagtacttcaggaagagagtcagtgatgaagagctgtccagcagaatcatctcccacatcaagacctCCAGGAGCCTCGACATCATGTGTctgatcccagtcttctgctggatcactgctacagttctggaccaCATGTTGACTGCAGACCagagaggagagctgcccaagaccctgactgacatgtactcacacttcctgctggttcagacaaagaggaagaagctCAAGTATGCTGAGGGACATGAGACGAGTCCACAGGAGCTGACGGAGGCTGACGGGGAAGTTCTTCTGAAGCTGGGGGAGGCTGGCGTTTGA

Function

GO: NA

KEGG:

id description
ko04666 Fc gamma R-mediated phagocytosis

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039811458.1 True 1348 mRNA 0.50 4 1968185 1972613

Neighbor

gene id symbol gene type direction distance location
si:ch211-1a19.3 NA coding downstream 362219 1583388 ~ 1605966 (-)
LOC120565409 cunh19orf24 coding downstream 506236 1456573 ~ 1461949 (-)
si:ch211-152f22.4 NA coding downstream 572657 1390241 ~ 1395528 (-)
map1sa NA coding downstream 745767 1189910 ~ 1222418 (-)
palm1a NA coding downstream 781615 1168821 ~ 1186570 (-)
LOC120565577 NA coding upstream 161948 2134561 ~ 2163094 (-)
LOC120565424 NA coding upstream 480706 2453319 ~ 2456640 (-)
LOC120565579 NA coding upstream 520199 2492812 ~ 2526088 (-)
apc2 apc2 coding upstream 562714 2535327 ~ 2600128 (-)
LOC120565580 NA coding upstream 630800 2603413 ~ 2617402 (-)
G92485 NA non-coding downstream 6808 1846902 ~ 1961377 (-)
G92447 NA non-coding downstream 53762 1898546 ~ 1914423 (-)
G92498 NA non-coding downstream 71138 1896673 ~ 1897047 (-)
LOC120565417 NA non-coding downstream 143939 1815893 ~ 1824246 (-)
G92460 NA non-coding downstream 164016 1710477 ~ 1804169 (-)
G92502 NA non-coding upstream 12231 1984844 ~ 2025713 (-)
G92489 NA non-coding upstream 33035 2005648 ~ 2042176 (-)
G92488 NA non-coding upstream 54920 2027533 ~ 2048577 (-)
G92518 NA non-coding upstream 81946 2054559 ~ 2056284 (-)
G92523 NA non-coding upstream 105833 2078446 ~ 2093734 (-)
LOC120565418 NA other downstream 5550 1837537 ~ 1962635 (-)
G92445 NA other downstream 55148 1893688 ~ 1913037 (-)
G92495 NA other downstream 77480 1888362 ~ 1890705 (-)
LOC120565407 camk4,LOC104962492,LOC102785978 other downstream 294817 1420640 ~ 1673368 (-)
G92437 NA other downstream 409767 1522491 ~ 1558418 (-)
slc30a7 slc30a7 other upstream 91053 2063666 ~ 2087124 (-)
G92535 NA other upstream 315662 2288275 ~ 2307309 (-)
G92564 NA other upstream 388378 2360991 ~ 2361662 (-)
G92565 NA other upstream 393539 2366152 ~ 2369666 (-)
G92930 NA other upstream 923316 2895929 ~ 2898679 (-)

Expression


Co-expression Network