LOC120565956


Basic Information

Item Value
gene id LOC120565956
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 14236539 ~ 14245111 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812107.1
ctggcacttACAGCCATGCCActctcaaagttgcttagatcacctttctttcccattctgacattcagtttagAGTTCAGGAGATTGGCTAGACCTGGatgacacccctaaatgcattgaagcagctgccatgtgattggttgattagataattgcattaatgagaaatcttacaggtattcctaataatcctttaggtgagtgtattaTTCGCCAACAATTGGTTAATGTTTAAGGTTTACCACATTCTTGATTGTAGACTGAAATACAGCGGGGTGGAAAAGATGACAAATTCTTTGTGTGCAGACATTTAACTTGAATCCAGTTATGATGACCACCCATTCATTGACCAATCATTACCAAGCAAAGAACCCAGGATAAAATCAGAATTTTAAGATCTTGTAAGGAAAGACTTTGCTTCTTCAAATAATATTGCATAAATACTGTTACTATTTTAGTGTTATGTTTAGGCCTGGGTATCGTTTCTAAAATGTCCATTACCGTGACTCCAATACAGTGGCGTAGgcagaaatagtattttgggCAGGCCAGTACAAAAGTGAGTGGGCCATTTTTAAAAAGATGCAAAAGTAGCAAAAagcacaaactaaaaaaaaactgtttaccTTTCAACACACTGCATTACAACGGCAATAGCAGTACTGTCTACAACATGCTCAACCAACAAAGCTACAACAGTATAGACAAAAACCTGTCGATTTTAACCTATTCAggcaaaaatatatttgcaccgGCAGAACCAGCAGCATTGGCTCTGCACAGCACGGTTATAAATTAAccattttattgcacaaagtggcttcttgaatttccccttggggatcaataaagtatctatctattaactaaacatgaacccaaacagcagagaaggcgtttacatactgcatgacatagaatagcctacatcagacagAAATCGCACATGTAACATATCCTTTGTGCATTCATAACAGCATTGTTTCTTCAGGACTATGGTCAGATCATGAGCAGCAAATGCGctaccagcagtaaaagaaaataaaagaatgaaaacttccagccaagcattgtttaaattatgaaagatataatgaagAGTTGCCAGCAAAGCACCAAATCTTAGACAGTGTATCGAGTCCACGGCAGTGACAGGTTTAATATTATGAaagaaatcactttttctgggatttggggtgttattttgtgtctctggtgcttccacatgcatacaaacttggagaaaaaaaaaacatccatgctgttttgagtgagatacaggtttctgaatgtatcctgccttcagtctccgggggACTGGCCAAAATCGGCTGGACCGTCTACGTCATCggccgaaacatttgtGCACAGTGCAGGTGAAGCTGGAGTTGGGCCACAGAGCCCAGCTAAGGAAGAAGGTGACATCAGAAGGCTTCACCCACGACTGGATGGTGTTTGTCCGAGGGCCAGAGACCGGCGACATCCAGCACTTTGTAGAGAAGGTTGTCTTCTGCCTGCATGACAGCTTCCCCATATCCAAGAGAGTATGCAAGGAGCCTCCATATAAAGTAGAGGAGACAGGCAACACAGGCATTCTCATGCATATCGAGGTCCACTTCAAGAACAAGGAGCTGCCAAAAAAGATGTGTTTTAAGTACCAGCTTAACCTAGAGGGTGACCACCTGCGCTGTGAGATGCTCACCTTCAACAACCCCAACAAAGACTTCAGGAGAAAGCTGATCAAAGCTGGAGCGGTTATGGTATTTCCAAAGGGCACTGAGGCAGCAACAAGGTCCAGTCCAGACTCCTCTATACCCCCAACTAAGAAGATCAAGACCTCCCATGTGTCCGAGGAACCCAGCAAAGAATGAAGTAATGGCATCAGTCAATCTGCACAAGCCGACCAAGGAGCATCGTGATTGGCCCTGAAAAGACTCTGAGAGCAAAGCAGACGACAGAGGTGGAAGCAGCAAGAAATGTTAATTCTATAAGGTGCGCATGCAGTGTAGCTGACACTGGAAAGTGTATATTTGTTGCCATGACAACGGCGAAAATTAATTTAAGCAATCCGTATGATTGCTGGGTAATTTCAGTTttatacattattataaaacattGTTAACTGAATTTCGGGTTCTTTATGAGTTAAATCGAGTTGTATTTTGTCTTTTGGTATATTCAGTACGAACGACTTTTATTTTGGTAAGCTACAAGATACAGGACCGAATGTTTTTGGTGACGGGCGCAAACGGAGGAGAGAAAGGCGAACGTGAATAGCGAACTTTTAGCtcctgatttgtttttattctacTGCTGGTCTACCAGGCAAACACGTTTTCACGGTGTTCCATCATGCTTTCTTAAAGGAATAAAGGTGAATATGGACATCAGTA
>XM_039812108.1
tggtggtcataaaaggatggacatggtcagaaacaatgctcagtGCACAGTGCAGGTGAAGCTGGAGTTGGGCCACAGAGCCCAGCTAAGGAAGAAGGTGACATCAGAAGGCTTCACCCACGACTGGATGGTGTTTGTCCGAGGGCCAGAGACCGGCGACATCCAGCACTTTGTAGAGAAGGTTGTCTTCTGCCTGCATGACAGCTTCCCCATATCCAAGAGAGTATGCAAGGAGCCTCCATATAAAGTAGAGGAGACAGGCAACACAGGCATTCTCATGCATATCGAGGTCCACTTCAAGAACAAGGAGCTGCCAAAAAAGATGTGTTTTAAGTACCAGCTTAACCTAGAGGGTGACCACCTGCGCTGTGAGATGCTCACCTTCAACAACCCCAACAAAGACTTCAGGAGAAAGCTGATCAAAGCTGGAGCGGTTATGGTATTTCCAAAGGGCACTGAGGCAGCAACAAGGTCCAGTCCAGACTCCTCTATACCCCCAACTAAGAAGATCAAGACCTCCCATGTGTCCGAGGAACCCAGCAAAGAATGAAGTAATGGCATCAGTCAATCTGCACAAGCCGACCAAGGAGCATCGTGATTGGCCCTGAAAAGACTCTGAGAGCAAAGCAGACGACAGAGGTGGAAGCAGCAAGAAATGTTAATTCTATAAGGTGCGCATGCAGTGTAGCTGACACTGGAAAGTGTATATTTGTTGCCATGACAACGGCGAAAATTAATTTAAGCAATCCGTATGATTGCTGGGTAATTTCAGTTttatacattattataaaacattGTTAACTGAATTTCGGGTTCTTTATGAGTTAAATCGAGTTGTATTTTGTCTTTTGGTATATTCAGTACGAACGACTTTTATTTTGGTAAGCTACAAGATACAGGACCGAATGTTTTTGGTGACGGGCGCAAACGGAGGAGAGAAAGGCGAACGTGAATAGCGAACTTTTAGCtcctgatttgtttttattctacTGCTGGTCTACCAGGCAAACACGTTTTCACGGTGTTCCATCATGCTTTCTTAAAGGAATAAAGGTGAATATGGACATCAGTA
>XM_039812109.1
caatcgagctgcttcgtagggcgggccTAGAAGTTACGTGGCGGAGGGCCGGGCGTTGTCTCTGTCTTCCGCtgtaaacaaatacaacaatCACTGACGCCAGAGATACATGGAGAACCGGtGCACAGTGCAGGTGAAGCTGGAGTTGGGCCACAGAGCCCAGCTAAGGAAGAAGGTGACATCAGAAGGCTTCACCCACGACTGGATGGTGTTTGTCCGAGGGCCAGAGACCGGCGACATCCAGCACTTTGTAGAGAAGGTTGTCTTCTGCCTGCATGACAGCTTCCCCATATCCAAGAGAGTATGCAAGGAGCCTCCATATAAAGTAGAGGAGACAGGCAACACAGGCATTCTCATGCATATCGAGGTCCACTTCAAGAACAAGGAGCTGCCAAAAAAGATGTGTTTTAAGTACCAGCTTAACCTAGAGGGTGACCACCTGCGCTGTGAGATGCTCACCTTCAACAACCCCAACAAAGACTTCAGGAGAAAGCTGATCAAAGCTGGAGCGGTTATGGTATTTCCAAAGGGCACTGAGGCAGCAACAAGGTCCAGTCCAGACTCCTCTATACCCCCAACTAAGAAGATCAAGACCTCCCATGTGTCCGAGGAACCCAGCAAAGAATGAAGTAATGGCATCAGTCAATCTGCACAAGCCGACCAAGGAGCATCGTGATTGGCCCTGAAAAGACTCTGAGAGCAAAGCAGACGACAGAGGTGGAAGCAGCAAGAAATGTTAATTCTATAAGGTGCGCATGCAGTGTAGCTGACACTGGAAAGTGTATATTTGTTGCCATGACAACGGCGAAAATTAATTTAAGCAATCCGTATGATTGCTGGGTAATTTCAGTTttatacattattataaaacattGTTAACTGAATTTCGGGTTCTTTATGAGTTAAATCGAGTTGTATTTTGTCTTTTGGTATATTCAGTACGAACGACTTTTATTTTGGTAAGCTACAAGATACAGGACCGAATGTTTTTGGTGACGGGCGCAAACGGAGGAGAGAAAGGCGAACGTGAATAGCGAACTTTTAGCtcctgatttgtttttattctacTGCTGGTCTACCAGGCAAACACGTTTTCACGGTGTTCCATCATGCTTTCTTAAAGGAATAAAGGTGAATATGGACATCAGTA
>XR_005640309.1
ctggcacttACAGCCATGCCActctcaaagttgcttagatcacctttctttcccattctgacattcagtttagAGTTCAGGAGATTGGCTAGACCTGGatgacacccctaaatgcattgaagcagctgccatgtgattggttgattagataattgcattaatgagaaatcttacaggtattcctaataatcctttaggtgagtgtattaTTCGCCAACAATTGGTTAATGTTTAAGGTTTACCACATTCTTGATTGTAGACTGAAATACAGCGGGGTGGAAAAGATGACAAATTCTTTGTGTGCAGACATTTAACTTGAATCCAGTTATGATGACCACCCATTCATTGACCAATCATTACCAAGCAAAGAACCCAGGATAAAATCAGAATTTTAAGATCTTGTAAGGAAAGACTTTGCTTCTTCAAATAATATTGCATAAATACTGTTACTATTTTAGTGTTATGTTTAGGCCTGGGTATCGTTTCTAAAATGTCCATTACCGTGACTCCAATACAGTGGCGTAGgcagaaatagtattttgggCAGGCCAGTACAAAAGTGAGTGGGCCATTTTTAAAAAGATGCAAAAGTAGCAAAAagcacaaactaaaaaaaaactgtttaccTTTCAACACACTGCATTACAACGGCAATAGCAGTACTGTCTACAACATGCTCAACCAACAAAGCTACAACAGTATAGACAAAAACCTGTCGATTTTAACCTATTCAggcaaaaatatatttgcaccgGCAGAACCAGCAGCATTGGCTCTGCACAGCACGGTTATAAATTAAccattttattgcacaaagtggcttcttgaatttccccttggggatcaataaagtatctatctattaactaaacatgaacccaaacagcagagaaggcgtttacatactgcatgacatagaatagcctacatcagacagAAATCGCACATGTAACATATCCTTTGTGCATTCATAACAGCATTGTTTCTTCAGGACTATGGTCAGATCATGAGCAGCAAATGCGctaccagcagtaaaagaaaataaaagaatgaaaacttccagccaagcattgtttaaattatgaaagatataatgaagAGTTGCCAGCAAAGCACCAAATCTTAGACAGTGTATCGAGTCCACGGCAGTGACAGGTTTAATATTATGAaagaaatcactttttctgggatttggggtgttattttgtgtctctggtgcttccacatgcatacaaacttggagaaaaaaaaaacatccatgctgttttgagtgagatacaggtttctgaatgtatcctgccttcagtctccgggggACTGGCCAAAATCGGCTGGACCGTCTACGTCATCggccgaaacatttgtGCACAGTGCAGGTGAAGCTGGAGTTGGGCCACAGAGCCCAGCTAAGGAAGAAGGTGACATCAGAAGGCTTCACCCACGACTGGATGGTGTTTGTCCGAGGGCCAGAGACCGGCGACATCCAGCACTTTGTAGAGAAGGTTGTCTTCTGCCTGCATGACAGCTTCCCCATATCCAAGAGAGTATGCAAGGAGCCTCCATATAAAGTAGAGGAGACAGGCAACACAGGCATTCTCATGCATATCGAGGTCCACTTCAAGAACAAGGAGCTGCCAAAAAAGATGTGTTTTAAGTACCAGCTTAACCTAGAGGGTGACCACCTGCGCTGTGAGATGCTCACCTTCAACAACCCCAACAAAGACTTCAGGAGAAAGCTGATCAAAGCTGGAGCGGTTATGGTATTTCCAAAGGGCACTGAGGCAGCAACAAGGTCCAGTCCAGACTCCTCTATACCCCCAACTAAGAAGATCAAGACCTCCCATGTGTCCGAGGAACCCAGCAAAGAATGAAGTAATGGCATCAGTCAATCTGCACAAGCCGACCAAGGAGCATCGTGATTGGCCCTGAAAAGACTCTGAGAGCAAAGCAGACGACAGAGGTGGAAGCAGCAAGAAATGTTAATTCTATAAGGCTGCCACCCACTGCTCCCCATGTGCCCAAAGAGAGCACTCTCTTGTTTTCAGCTGTGATCCGTCTTGCAGGCAAGATCCATCATCCATAATTTGTCGCAAACATCCAATGTGTTTGACTCACTTAAGACACAGTTGTGTAGCAGGGTGGAGACTACAGGTGTGTATTCTGACTATTTGAGTGTAGCCTGTCCTGACGTAAACCAGTCATGTCTGCAGATTGTAAAGCTGTGATTTTGTATGAAGTATGAAATTCAAGGTCTTCATTTTTCAATTATATGTTTAGGTACAATTATGATGAAGTAATAGGGCTCCAAAGAGGAGGTAAAACTGTTCtcacctccattttccattgggAAGTGGACAAAACACaatcataatttttttgttttgtgactTTTCTGAAAACCATATCAGATTGTCAAAGTCAAAGCACCTGACCTTGAACTGTATCATTTTTAATGCTGTCAGTTtcacgcgttattaacggcgttaaggcaaacccattttaacgccgtactttttttattgtgagattaacgttctttttagcctagcaaactttgtagtttttttaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812107.1 False 2393 mRNA 0.41 6 14237395 14243533
XM_039812108.1 False 1072 mRNA 0.45 6 14237395 14244183
XM_039812109.1 False 1150 mRNA 0.46 6 14237395 14245111
XR_005640309.1 True 2570 transcript 0.41 7 14236539 14243533

Neighbor

gene id symbol gene type direction distance location
LOC120565955 mllt1 coding downstream 2172 14209553 ~ 14234367 (-)
rfx2 rfx2 coding downstream 62707 14145325 ~ 14173832 (-)
prg4b NA coding downstream 162111 14065268 ~ 14074428 (-)
pla2g4ab pla2g4a coding downstream 242040 13971236 ~ 13994499 (-)
arpc5b arpc5,LOC104921830,LOC103367487,LOC103137250 coding downstream 281623 13948948 ~ 13954916 (-)
acer1 acer1 coding upstream 4609 14249720 ~ 14258346 (-)
myo1f myo1f coding upstream 14251 14259362 ~ 14281238 (-)
adamts10 adamts10,LOC100699563,LOC102201129,LOC101466052,LOC104921820 coding upstream 36993 14282104 ~ 14342842 (-)
nr2f6b nr2f6,LOC108238456,LOC103359430,LOC104921812,LOC104966154 coding upstream 254207 14499318 ~ 14516522 (-)
ushbp1 mcc coding upstream 282295 14527406 ~ 14536827 (-)
G95355 NA non-coding downstream 27852 14206301 ~ 14208687 (-)
G95347 acsbg2,LOC103367493 non-coding downstream 43536 14191559 ~ 14193003 (-)
G95346 LOC104955008 non-coding downstream 47861 14186157 ~ 14188678 (-)
G95277 NA non-coding downstream 180430 14052605 ~ 14056109 (-)
G95271 tpr non-coding downstream 187676 14048094 ~ 14048863 (-)
G95388 mknk2 non-coding upstream 131764 14376875 ~ 14459174 (-)
G95544 NA non-coding upstream 560144 14805255 ~ 14805537 (-)
G95551 LOC103365563 non-coding upstream 671967 14917078 ~ 14917591 (-)
G95553 NA non-coding upstream 673670 14918781 ~ 14923843 (-)
G95581 fam163a,LOC102222863 non-coding upstream 778856 15023967 ~ 15026325 (-)
ivns1abpa ivns1abp other downstream 401329 13821943 ~ 13835210 (-)
G94989 NA other downstream 1505570 12727911 ~ 12730969 (-)
kank4 kank4,LOC102229502,LOC106964224,LOC106933507,LOC104958694 other downstream 1788347 12368525 ~ 12448192 (-)
fam183a NA other downstream 2173574 12060266 ~ 12062965 (-)
LOC120565625 tmem125 other downstream 2202697 12012712 ~ 12033842 (-)
dda1 dda1,LOC105939318 other upstream 374233 14619344 ~ 14623046 (-)
lhx9 lhx9,LOC102787388 other upstream 533882 14778993 ~ 14793458 (-)
LOC120565366 LOC103365555,LOC102781831,LOC102293722 other upstream 918347 15163458 ~ 15173749 (-)
G95680 lsm4,LOC106613629 other upstream 1134396 15379507 ~ 15382862 (-)
LOC120565484 LOC104958137 other upstream 1142777 15387888 ~ 15457901 (-)

Expression


Co-expression Network