G104534


Basic Information

Item Value
gene id G104534
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 11858106 ~ 11859004 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU140382
GCAAATATGTTTAATGCATGTCTAATATCTTTGCAATACATTTCTCTTGCGTTCTTTCACATAACCAAGACTATAGAAGTGTAAAGAATAGGCTACGTCCAATTATTCCAAGGGACATACatgaggggggggggtgccCGGTGTATTCTCTATCGTGTAAAGAGTCCTTGGTTGAAAAAAGATTGGGAACCTGTGCCCTAATCTGTGACTACGGAAAGACGCATAGACAGTGAAGGATATATCCCGATTCTGGGAGTCAAGTTCTAGTCTCTGTTCCACCTTTACCTTTCAGAGGGTGCCCCGTTCCTACAAATACAGCCGTTTCAGTCCCTGTTGTACCACTAATCTTGGGTTTACAACTACAGTTGAGTTCCTGTCCTTAACAGTGGACTTTAATCTTTATTGTACCACATTTCAGGGCTTTTAGCTCCTGTTCCACAGCCACAGTGGGGTTCTTGTCCCTGTTCCACCAGTAAATTCGGGATGTAGTCCCCTGCCTGGTGGAGGTCATGGGTTCCATCCTTCGTGTCTGATGATGATTGCACTGCCCCCTACTCAGCTACTGTCTGGCCCAGTGGCCCTCTTATCAGCCCCTGGTCCCCCCCCAGCCACAGTCCTGCAACCTTCCATCCCTTTTCTACACTGACAGTCCATGAAATGTCTTCCCTTAACATCGGTGGTGGTTTATAAAAATGGAGGTTCAACAATAACATTGTTTCTAACGGTGACGGTATGTCATACCTGTAAATGATGTTTATCTGTCATGCCTAGTcaaataatttaaacaataaaaagagggatttttttaaatgtctataATATCTGAAAGTCCCTTTGATGTGTAGTACTGGTGTTACCATTGTTGTAGTGTATGTGATACCCTATTGGGATTGTGTTAC

Function

GO: NA

KEGG:

id description
ko04360 Axon guidance

RNA

RNA id representative length rna type GC content exon number start site end site
TU140382 True 899 lncRNA 0.44 1 11858106 11859004

Neighbor

gene id symbol gene type direction distance location
LOC120567272 NA coding upstream 86684 11766521 ~ 11771422 (+)
LOC120566361 NA coding upstream 253033 11603527 ~ 11605073 (+)
LOC120566687 NA coding upstream 300581 11556629 ~ 11557525 (+)
LOC120567422 NA coding upstream 1923868 9933135 ~ 9934238 (+)
tmem129 tmem129 coding upstream 2585234 9265862 ~ 9272872 (+)
enpp6 enpp6 coding downstream 5242 11864246 ~ 11896809 (+)
LOC120567327 LOC104967163,LOC104935410 coding downstream 69644 11928648 ~ 11938499 (+)
immt immt coding downstream 84425 11943429 ~ 11965809 (+)
elf2a elf2 coding downstream 179971 12038975 ~ 12056911 (+)
LOC120566516 NA coding downstream 414050 12273054 ~ 12274053 (+)
G104512 NA non-coding upstream 136154 11721625 ~ 11721952 (+)
G104510 NA non-coding upstream 146004 11711623 ~ 11712102 (+)
LOC120567332 NA non-coding upstream 147150 11697877 ~ 11710956 (+)
G104505 LOC105893694,LOC105900140,LOC105912973,LOC105893089 non-coding upstream 169718 11688125 ~ 11688388 (+)
G104482 NA non-coding upstream 214887 11642718 ~ 11643219 (+)
LOC120567324 NA non-coding downstream 12256 11871260 ~ 11872311 (+)
G104595 NA non-coding downstream 125526 11984530 ~ 11985895 (+)
G104623 NA non-coding downstream 199385 12058389 ~ 12058589 (+)
G104626 NA non-coding downstream 204362 12063366 ~ 12063632 (+)
G104637 NA non-coding downstream 282447 12141451 ~ 12142126 (+)
LOC120567273 stox2,LOC102298495,LOC100710800,LOC103356674 other upstream 7703 11778015 ~ 11850403 (+)
fbxo38 fbxo38,LOC104946725 other upstream 171729 11650517 ~ 11686377 (+)
G104301 NA other upstream 1939791 9917872 ~ 9918315 (+)
LOC120567404 LOC104951845 other upstream 3381657 8474616 ~ 8476449 (+)
LOC120567362 NA other upstream 3511572 8339416 ~ 8346534 (+)
ndufc1 ndufc1,LOC102793397 other downstream 138257 11997261 ~ 12001650 (+)
mgarpa mgarp other downstream 147511 12006515 ~ 12029503 (+)
LOC120566515 NA other downstream 169621 12028625 ~ 12033832 (+)
rell2 NA other downstream 2759390 14618394 ~ 14637424 (+)
hspa9 hspa9 other downstream 2908367 14767371 ~ 14782666 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) G101270 NA non-coding CM030132.1 CM030132.1 26364295 ~ 26365059 (+)