LOC120566515


Basic Information

Item Value
gene id LOC120566515
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 12028625 ~ 12033832 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU140504
attaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaacagtagaggCACATGAAAGAGGCCCCATTGTTGAAGAGGCCCCAGCACCAGTAGAGGCTGCACCAGTTGTTGAAGAGGCACCAGTAGAGGCTGCACCAGTTGTTGAAGAGGCCACAGCACCAGTAGAGGCTGCACCAGTTGTTGAAGAGACCCCAGCACCAATAGAGGCTGCACCAGTTGTTGAAGAGACCCCAGCACCAATAGAGGCTGCACCAGTTGTTGAAGAGGCCCCAGCACCAGTAGAGGCTACAGGAGTTGTTGAAGAGGCACCCGTAGAGGCTGCGCCAGTTGTTGAAGAGGCCCCAGCACCAGTAGAGGCTGCAGCAGTTGTTGAAGAGGCCCCAGCACCAGTAGAGGCTGCGCCAGTTGTTGAAGAGGCCCCAGCACCAGTAGAGGCTGCGCCAGTTGTTGAAGAGGCCCCAGCACCAGTAGAGGCTGCAGCAGTTGTTGAAGAGGCACCAGTAGAGGCTGCGCCAGTTGTTGAAGACGTCCCAGCACCAGTAGAGGCTGCGCCTAAAGAAGAGACCTCTGCACCAATTGTTGAGGCTCCAGCACCAGTAGAGGCTGCGGCAGTGGTAGAAGAGGCCTCAACGCCAGTAGAACTGGCTGTGGAACCAGTTGTGGAAGAAGTCGCAGCAACCCCTGCTGTGGAAGTAGCCACCGCGGTGGTGGTGGAAGAAGCAGCTGCAGAGACCCTGGCAGAAGGTCCCAAGAGAGAGTACATTGTTGTGGTTCTGGAAGGAACACCGAAAGCTGAAAAAAGGCCAAAGGTGCTGGGAGTAGGGCCCTTGACTGGAAGAATCATCCAAGCTCCAGAAGAGGATGATGCCCCTTCTTCTGAGGGTAGGCGACGTCTTCTTAGGATGCAAATGCAGTAGTTCCAAATAAGTAAACTGCTCCCGAATGATGACTTTCTATCCTGCAGAAGAAGAGGATGTGCCTTTCTCAAACCCTTTCCCTTTCTCCCTTCACCCATAAAAATGCAAGGCACAAAAATGTAGTTTCAGTGAAAAGATACACATACCGCAGTGTTTAAATCAATGCCTACTCTATGGAACCATCCTCCCTCACATATTGGCGGTGCCCATATGGCCCATTACTGTGACACTCCACACTGACTTGACTGTATAGTCCCAGCTGCGCCCAGTCAGTAGTTGAACAGATCTCTGGTTTATCATGTAGTAGCCTCAATAAGAGTTCTTGTAACTTCTGTGAATTGTAACCCGACAAAACTGAGCCATTCAGTCaccctatttttttctttttgtactgTTACAGTGTTCACTGCCTCAGAAATCACTCCAGTGCAATACCTTGATACTCATCACCGCATCCTGTTAACCCAGGCTCTGCCCAGCCACTTGTAATGTGAAACTAGTGTTATATTGTAAAGAAGCAAGGCCTGTTTTTATTCACCAGCATTCTTTTCAATACCCGGCCTCAGGTTTTtctctggaaaaaaaacttgctGTAGTTTTTGTTTTAGGAAGAAAGACCATCCTACCTCACCGTGTTCTCAGTCTTTAAAATGACACCATAGACCTCTTCTTGATGCAGTCACAGTGTTACAGTTCCTAAGCCGCTGACTTCAAACACTGCATTCTTACTTTTCAGAAGCTGTAATTTGATCACCTAAACTTATCATGCCAAACTAAATAAGGCAGGCATTTGTTGATTACCCTTTAAttgtcttcctttttttaaagggtaatttAACACTGGAACAGAGGAAAACTGCTGCTCTGCTGTCATTGGGTCAAAAATCTTAAAGCATGGGAGTTCAGCCCCAACAAGATGTAGCGAAATGTTTATTCAAACCGAAACGGCGGTGCATCGAACACATGCTCCTTTTTTTGCCGTCgctgctgattggctaacacctctgacacacccaccaaacgagaaaAAACATACCTCAAAGATCGTTGCACAATGATTCACACCGTTCTAAGGATACATGAGGATCAACCCGGAAACCATGGCAAAACACAGTTGTGAAATTGAATGTGCCCCATGTACCCTTCTAGCCACACCCCCAGTTGGTGATGTCACAGCAGGATTTTGACATTGATTTGGGGTATGGCCAGGCATGAAACAAACTTGAGAGGCCACCGGTGTTTTCCTCTTTATATTCAGTGTTGAGTTACCTTTTTAGTTTGTTCCTCCTTAATTTTGTAGACAGTCTAATGATTATATAGTGAATGTATAACATTTGGGAAATCCTCTGATATTATGTTGCAATCTTTTAAACTTTGGCTTATGTTATATGGATAGTGCAACAGTCCTTGTATCATTTGTATCCACATCTCCTCCTTAGCCATTGATATAGATGCAAGGGTTGGATAAGGGAATGGATAAGTAGCCGCATGTTCTTTCACTCTTTGCTTTTTCTTGTCTTGTTCTAGCCGTCCGGTCTGCGTGGATGTATGATATGAAGGCTTGCAGCAAGTATGAACCGTAATGATGCTGATGTGCTGGTGTGacatgaaatgtgtgtgtgtttttggaagTGTTGCAGTACGTCTGAAGTAAAGTCTCCAGTATGAAATGCTTTGACAAGTCGCTTGTAGTTCTCTCTTCTTTGATTTCTTTTCAGATTTTCTCGCCTCCGCTGTCTGAGTTTCGGCCTTTGTTAGCTTTGTGTACGCTATTTAAAATGGATCACTGAGGGGAGAATTGAACTTGCCTGTTagtatggatttaaaaatggGAATGATTTTATTCTGAGGTTTCTATGATAGGATGCGGGGTGGATGCCTTTGACTTAGCAAAGGAGAGAAACTGACGGTTTCACATGTtactgtttttcttgtttttgcaAAATAAAGCGGGA
>TU140505
attaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaacagtagaggCACATGAAAGAGGCCCCATTGTTGAAGAGGCCCCAGCACCAGTAGAGGCTGCACCAGTTGTTGAAGAGGCACCAGTAGAGGCTGCACCAGTTGTTGAAGAGGCCACAGCACCAGTAGAGGCTGCACCAGTTGTTGAAGAGACCCCAGCACCAATAGAGGCTGCACCAGTTGTTGAAGAGACCCCAGCACCAATAGAGGCTGCACCAGTTGTTGAAGAGGCCCCAGCACCAGTAGAGGCTACAGGAGTTGTTGAAGAGGCACCCGTAGAGGCTGCGCCAGTTGTTGAAGAGGCCCCAGCACCAGTAGAGGCTGCAGCAGTTGTTGAAGAGGCCCCAGCACCAGTAGAGGCTGCGCCAGTTGTTGAAGAGGCCCCAGCACCAGTAGAGGCTGCGCCAGTTGTTGAAGAGGCCCCAGCACCAGTAGAGGCTGCAGCAGTTGTTGAAGAGGCACCAGTAGAGGCTGCGCCAGTTGTTGAAGACGTCCCAGCACCAGTAGAGGCTGCGCCTAAAGAAGAGACCTCTGCACCAATTGTTGAGGCTCCAGCACCAGTAGAGGCTGCGGCAGTGGTAGAAGAGGCCTCAACGCCAGTAGAACTGGCTGTGGAACCAGTTGTGGAAGAAGTCGCAGCAACCCCTGCTGTGGAAGTAGCCACCGCGGTGGTGGTGGAAGAAGCAGCTGCAGAGACCCTGGCAGAAGGTCCCAAGAGAGAGTACATTGTTGTGGTTCTGGAAGGAACACCGAAAGCTGAAAAAAGGCCAAAGGTGCTGGGAGTAGGGCCCTTGACTGGAAGAATCATCCAAGCTCCAGAAGAGGATGATGCCCCTTCTTCTGAGTAAACTGCTCCCGAATGATGACTTTCTATCCTGCAGAAGAAGAGGATGTGCCTTTCTCAAACCCTTTCCCTTTCTCCCTTCACCCATAAAAATGCAAGGCACAAAAATGTAGTTTCAGTGAAAAGATACACATACCGCAGTGTTTAAATCAATGCCTACTCTATGGAACCATCCTCCCTCACATATTGGCGGTGCCCATATGGCCCATTACTGTGACACTCCACACTGACTTGACTGTATAGTCCCAGCTGCGCCCAGTCAGTAGTTGAACAGATCTCTGGTTTATCATGTAGTAGCCTCAATAAGAGTTCTTGTAACTTCTGTGAATTGTAACCCGACAAAACTGAGCCATTCAGTCaccctatttttttctttttgtactgTTACAGTGTTCACTGCCTCAGAAATCACTCCAGTGCAATACCTTGATACTCATCACCGCATCCTGTTAACCCAGGCTCTGCCCAGCCACTTGTAATGTGAAACTAGTGTTATATTGTAAAGAAGCAAGGCCTGTTTTTATTCACCAGCATTCTTTTCAATACCCGGCCTCAGGTTTTtctctggaaaaaaaacttgctGTAGTTTTTGTTTTAGGAAGAAAGACCATCCTACCTCACCGTGTTCTCAGTCTTTAAAATGACACCATAGACCTCTTCTTGATGCAGTCACAGTGTTACAGTTCCTAAGCCGCTGACTTCAAACACTGCATTCTTACTTTTCAGAAGCTGTAATTTGATCACCTAAACTTATCATGCCAAACTAAATAAGGCAGGCATTTGTTGATTACCCTTTAAttgtcttcctttttttaaagggtaatttAACACTGGAACAGAGGAAAACTGCTGCTCTGCTGTCATTGGGTCAAAAATCTTAAAGCATGGGAGTTCAGCCCCAACAAGATGTAGCGAAATGTTTATTCAAACCGAAACGGCGGTGCATCGAACACATGCTCCTTTTTTTGCCGTCgctgctgattggctaacacctctgacacacccaccaaacgagaaaAAACATACCTCAAAGATCGTTGCACAATGATTCACACCGTTCTAAGGATACATGAGGATCAACCCGGAAACCATGGCAAAACACAGTTGTGAAATTGAATGTGCCCCATGTACCCTTCTAGCCACACCCCCAGTTGGTGATGTCACAGCAGGATTTTGACATTGATTTGGGGTATGGCCAGGCATGAAACAAACTTGAGAGGCCACCGGTGTTTTCCTCTTTATATTCAGTGTTGAGTTACCTTTTTAGTTTGTTCCTCCTTAATTTTGTAGACAGTCTAATGATTATATAGTGAATGTATAACATTTGGGAAATCCTCTGATATTATGTTGCAATCTTTTAAACTTTGGCTTATGTTATATGGATAGTGCAACAGTCCTTGTATCATTTGTATCCACATCTCCTCCTTAGCCATTGATATAGATGCAAGGGTTGGATAAGGGAATGGATAAGTAGCCGCATGTTCTTTCACTCTTTGCTTTTTCTTGTCTTGTTCTAGCCGTCCGGTCTGCGTGGATGTATGATATGAAGGCTTGCAGCAAGTATGAACCGTAATGATGCTGATGTGCTGGTGTGacatgaaatgtgtgtgtgtttttggaagTGTTGCAGTACGTCTGAAGTAAAGTCTCCAGTATGAAATGCTTTGACAAGTCGCTTGTAGTTCTCTCTTCTTTGATTTCTTTTCAGATTTTCTCGCCTCCGCTGTCTGAGTTTCGGCCTTTGTTAGCTTTGTGTACGCTATTTAAAATGGATCACTGAGGGGAGAATTGAACTTGCCTGTTagtatggatttaaaaatggGAATGATTTTATTCTGAGGTTTCTATGATAGGATGCGGGGTGGATGCCTTTGACTTAGCAAAGGAGAGAAACTGACGGTTTCACATGTtactgtttttcttgtttttgcaAAATAAAGCGGGA
>XM_039813042.1
ATGTTAAAACCAGCAAGGCCATCTTCTCAGCAGGTTATTCTTGATTTACAGCTGCACACCACAGtagaggCACATGAAAGAGGCCCCATTGTTGAAGAGGCCCCAGCACCAGTAGAGGCTGCACCAGTTGTTGAAGAGGCACCAGTAGAGGCTGCACCAGTTGTTGAAGAGGCCACAGCACCAGTAGAGGCTGCACCAGTTGTTGAAGAGACCCCAGCACCAATAGAGGCTGCACCAGTTGTTGAAGAGACCCCAGCACCAATAGAGGCTGCACCAGTTGTTGAAGAGGCCCCAGCACCAGTAGAGGCTACAGGAGTTGTTGAAGAGGCACCCGTAGAGGCTGCGCCAGTTGTTGAAGAGGCCCCAGCACCAGTAGAGGCTGCAGCAGTTGTTGAAGAGGCCCCAGCACCAGTAGAGGCTGCGCCAGTTGTTGAAGAGGCCCCAGCACCAGTAGAGGCTGCGCCAGTTGTTGAAGAGGCCCCAGCACCAGTAGAGGCTGCAGCAGTTGTTGAAGAGGCACCAGTAGAGGCTGCGCCAGTTGTTGAAGACGTCCCAGCACCAGTAGAGGCTGCGCCTAAAGAAGAGACCTCTGCACCAATTGTTGAGGCTCCAGCACCAGTAGAGGCTGCGGCAGTGGTAGAAGAGGCCTCAACGCCAGTAGAACTGGCTGTGGAACCAGTTGTGGAAGAAGTCGCAGCAACCCCTGCTGTGGAAGTAGCCACCGCGGTGGTGGTGGAAGAAGCAGCTGCAGAGACCCTGGCAGAAGGTCCCAAGAGAGAGTACATTGTTGTGGTTCTGGAAGGAACACCGAAAGCTGAAAAAAGGCCAAAGGTGCTGGGAGTAGGGCCCTTGACTGGAAGAATCATCCAAGCTCCAGAAGAGGATGATGCCCCTTCTTCTGAGTAAACTGCTCCCGAATGATGACTTTCTATCCTGCAGAAGAAGAGGATGTGCCTTTCTCAAACCCTTTCCCTTTCTCCCTTCACCCATAAAAATGCAAGGCACAAAAATGTAGTTTCAGTGAAAAGATACACATACCGCAGTGTTTAAATCAATGCCTACTCTATGGAACCATCCTCCCTCACATATTGGCGGTGCCCATATGGCCCATTACTGTGACACTCCACACTGACTTGACTGTATAGTCCCAGCTGCGCCCAGTCAGTAGTTGAACAGATCTCTGGTTTATCATGTAGTAGCCTCAATAAGAGTTCTTGTAACTTCTGTGAATTGTAACCCGACAAAACTGAGCCATTCAGTCaccctatttttttctttttgtactgTTACAGTGTTCACTGCCTCAGAAATCACTCCAGTGCAATACCTTGATACTCATCACCGCATCCTGTTAACCCAGGCTCTGCCCAGCCACTTGTAATGTGAAACTAGTGTTATATTGTAAAGAAGCAAGGCCTGTTTTTATTCACCAGCATTCTTTTCAATACCCGGCCTCAGGTTTTtctctggaaaaaaaacttgctGTAGTTTTTGTTTTAGGAAGAAAGACCATCCTACCTCACCGTGTTCTCAGTCTTTAAAATGACACCATAGACCTCTTCTTGATGCAGTCACAGTGTTACAGTTCCTAAGCCGCTGACTTCAAACACTGCATTCTTACTTTTCAGAAGCTGTAATTTGATCACCTAAACTTATCATGCCAAACTAAATAAGGCAGGCATTTGTTGATTACCCTTTAAttgtcttcctttttttaaagggtaatttAACACTGGAACAGAGGAAAACTGCTGCTCTGCTGTCATTGGGTCAAAAATCTTAAAGCATGGGAGTTCAGCCCCAACAAGATGTAGCGAAATGTTTATTCAAACCGAAACGGCGGTGCATCGAACACATGCTCCTTTTTTTGCCGTCgctgctgattggctaacacctctgacacacccaccaaacgagaaaAAACATACCTCAAAGATCGTTGCACAATGATTCACACCGTTCTAAGGATACATGAGGATCAACCCGGAAACCATGGCAAAACACAGTTGTGAAATTGAATGTGCCCCATGTACCCTTCTAGCCACACCCCCAGTTGGTGATGTCACAGCAGGATTTTGACATTGATTTGGGGTATGGCCAGGCATGAAACAAACTTGAGAGGCCACCGGTGTTTTCCTCTTTATATTCAGTGTTGAGTTACCTTTTTAGTTTGTTCCTCCTTAATTTTGTAGACAGTCTAATGATTATATAGTGAATGTATAACATTTGGGAAATCCTCTGATATTATGTTGCAATCTTTTAAACTTTGGCTTATGTTATATGGATAGTGCAACAGTCCTTGTATCATTTGTATCCACATCTCCTCCTTAGCCATTGATATAGATGCAAGGGTTGGATAAGGGAATGGATAAGTAGCCGCATGTTCTTTCACTCTTTGCTTTTTCTTGTCTTGTTCTAGCCGTCCGGTCTGCGTGGATGTATGATATGAAGGCTTGCAGCAAGTATGAACCGTAATGATGCTGATGTGCTGGTGTGacatgaaatgtgtgtgtgtttttggaagTGTTGCAGTACGTCTGAAGTAAAGTCTCCAGTATGAAATGCTTTGACAAGTCGCTTGTAGTTCTCTCTTCTTTGATTTCTTTTCAGATTTTCTCGCCTCCGCTGTCTGAGTTTCGGCCTTTGTTAGCTTTGTGTACGCTATTTAAAATGGATCACTGAGGGGAGAATTGAACTTGCCTGTTagtatggatttaaaaatggGAATGATTTTATTCTGAGGTTTCTATGATAGGATGCGGGGTGGATGCCTTTGACTTAGCAAAGGAGAGAAACTGACGGTTTCACATGTtactgtttttcttgtttttgcaAAATAAAGCGGGATTAATCTTGAATTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU140504 True 2884 lncRNA 0.45 3 12030433 12033817
TU140505 False 2837 lncRNA 0.45 2 12030433 12033817
XM_039813042.1 False 2862 mRNA 0.46 3 12028625 12033832

Neighbor

gene id symbol gene type direction distance location
immt immt coding upstream 62816 11943429 ~ 11965809 (+)
LOC120567327 LOC104967163,LOC104935410 coding upstream 90126 11928648 ~ 11938499 (+)
enpp6 enpp6 coding upstream 131816 11864246 ~ 11896809 (+)
LOC120567272 NA coding upstream 257203 11766521 ~ 11771422 (+)
LOC120566361 NA coding upstream 423552 11603527 ~ 11605073 (+)
elf2a elf2 coding downstream 5143 12038975 ~ 12056911 (+)
LOC120566516 NA coding downstream 239222 12273054 ~ 12274053 (+)
slc7a11 slc7a11 coding downstream 335430 12369262 ~ 12395757 (+)
pcdh18b LOC101076687 coding downstream 643354 12677186 ~ 12689800 (+)
LOC120567153 NA coding downstream 1016616 13050448 ~ 13052105 (+)
G104595 NA non-coding upstream 42730 11984530 ~ 11985895 (+)
LOC120567324 NA non-coding upstream 156314 11871260 ~ 11872311 (+)
G104534 NA non-coding upstream 169621 11858106 ~ 11859004 (+)
G104512 NA non-coding upstream 306673 11721625 ~ 11721952 (+)
G104510 NA non-coding upstream 316523 11711623 ~ 11712102 (+)
G104623 NA non-coding downstream 24557 12058389 ~ 12058589 (+)
G104626 NA non-coding downstream 29534 12063366 ~ 12063632 (+)
G104637 NA non-coding downstream 107619 12141451 ~ 12142126 (+)
G104639 NA non-coding downstream 121081 12154913 ~ 12155263 (+)
G104660 NA non-coding downstream 148730 12182562 ~ 12182830 (+)
ndufc1 ndufc1,LOC102793397 other upstream 26975 11997261 ~ 12001650 (+)
LOC120567273 stox2,LOC102298495,LOC100710800,LOC103356674 other upstream 178222 11778015 ~ 11850403 (+)
fbxo38 fbxo38,LOC104946725 other upstream 342248 11650517 ~ 11686377 (+)
G104301 NA other upstream 2110310 9917872 ~ 9918315 (+)
LOC120567404 LOC104951845 other upstream 3552176 8474616 ~ 8476449 (+)
rell2 NA other downstream 2584562 14618394 ~ 14637424 (+)
hspa9 hspa9 other downstream 2733539 14767371 ~ 14782666 (+)
atp6v0e1 atp6v0e1 other downstream 2855403 14889235 ~ 14891495 (+)
stc2a stc2 other downstream 2862129 14895961 ~ 14970124 (+)
vma21 vma21 other downstream 4463468 16497300 ~ 16505658 (+)

Expression


Co-expression Network