hspa9 (hspa9)


Basic Information

Item Value
gene id hspa9
gene name hspa9
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 14767371 ~ 14782666 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU140887
ACAGCTGTCTATGTGAGGGTCATATTTGATGTAAAAGAACGTAAGGACTTGATCTGTGAGACGGCCCATCTTAAAGTTCTTTGCATCCTCTTTTGCAGCATTCATCCTAAACAGCAGAGTTTGTAAATTGTGAATCAACCTGTCGACTACAGTCAAACTAGAAATCTGTGAATCTGGATGTGGAAATTGCGCGATAGAGGATGAGACCTTAGTTCTCGCTGCCGAGCGATAGCAGGACCAGTTGGAGTTCAACACACCAGTACAGGACTGAGAGTTGATGATGAGCCAAGCTGTGTCCTTTCGCTCAGAAGCTGCCATAAACTGCTCTGTGTGATGTGACCTTTGCTACGTGCCTGCAATATAGTGATCCAGGCCTGCTCTTTATGTGACGGGAGAACTGAGGCCACGTTTTGAAGTGAAATTGGGGTTGAGGGTGTTGAGATAACTTGCTGTTTTTCTAATAAAAATCTGAAACATTGG
>XM_039813030.1
CATGTGTTGGATAATTCTGGAAGAATTCGCTTCTATTCAGTCCGACGACAAGCAGCCGCAGCTCGGCCTGGACCCGCCGCCAGAAACCCGGACCTACCGCAGCTCAGCCTTATTGTTCACACAGCTGGCCAACAGTAACCCTAGACAGGGACTCTTTATTCATACCacgcttttttttaataaactcaGCTAGACTTCTGCTAGTTAGCCTGTTAGCCCACTGTTAGCTTTCTCTTAGCCTGCTTGCTGTTAGCCGACTTGTCAAAATGTTGGGTGTCGCCAGAAGCGTTTCCAGAACTCTAACGCCGACACGGACCTGTGTCACCAGGAACGTGTCCTCCATGCTGAAGAAGGCATGCTGGAGCGGCGGCGTCCAGCCAGATGCTCTCAGAGCTCTGTCCAGGAGGGAGTATGCGTCGGAGGCCATCAAGGGCTCAGTCATTGGGATTGACCTGGGAACCACCAACTCATGTGTCGCAGTCATGGAGGGGAAACAGGCCAAGGTGTTGGAGAATGCAGAGGGAGCCAGGACGACTCCTTCAGTCATCGCCTTCACAGCAGACGGGGAGCGTCTGGTGGGCATGCCCGCCAAACGCCAGTCTGTCACCAACCCTCAGAACACACTGTTTGCCACGAAGAGGCTGATCGGACGCCGCTTTGAAGACCCCGAGGTCCAGAAAGACCTGAAGAACGTCCCCTTCAAGATTGTGCGTGCATCTAACGGAGATGCTTGGGTGGAGGCTCATGGGAAAATGTACTCCCCCAGCCAGGCTGGAGCCTTCGTCCTGATGAAGATGAAGGAGACTGCAGAGAACTATCTGGGAACCAAAGTGAAGAACGCTGTGGTCACTGTACCGGCCTACTTCAATGACTCTCAGAGACAGGCTACCAAAGATGCTGGTCAGATCGCTGGTCTGAACGTCCTGCGTGTGATCAATGAGCCAACAGCAGCTGCACTGGCCTACGGCCTGGAAAAAACCCAGGATAAAATTATTGCTGTGTATGATCTGGGTGGAGGTACGTTTGATATCTCAGTCCTGGAGATCCAGAAGGGAGTGTTTGAGGTGAAGTCCACCAACGGTGACACCTTCCTGGGGGGAGAGGACTTTGACCATCACCTCCTCCAACACATTGTTAAGGAGTTCAAGAGAGAGTCTGGCGTGGATCTGTTGAAAGACAACATGGCTCTTCAGAGAGTCCGAGAAGCGGCTGAGAAGGCCAAGTGTGAGCTGTCCTCTTCACTGCAGACTGACATCAACCTTCCCTACCTGACCATGGACGCCTCTGGCCCCAAACACCTCAACATGAAGCTGACCCGTTCTCAGTTTGAAGGCATCGTGGCTGATCTGATCCGGCGCACCGTGGCTCCCTGTCAGAAGGCCTTGCAGGACGCTGAGGTGTCCAAGGGAGACATCGGAGAGGTCCTGCTGGTCGGAGGCATGAGCCGTATGCCCAAGGTGCAACAAACTGTTCAGGACCTGTTCGGCCGCGCTCCCAGCAAGTCCGTCAACCCTGACGAGGCCGTTGCCATAGGAGCAGCCATCCAGGGTGGAGTTTTGGCCGGTGATGTGACTGATGTTCTGCTGTTGGATGTCACACCTCTGTCTCTGGGTATCGAGACCCTGGGCGGAGTCTTCACCAAACTCATCAACAGGAACACCACCATTCCCACCAAGAAGAGCCAGGTGTTCTCCACGGCGGCGGACGGACAGACGCAGGTGGAGATCAAGGTGTGTCAGGGAGAGCGGGAGATGGCAGCAGACAACAAGGTGCTGGGTCAGTTCACTCTGGTGGGAATCCCCCCTGCCCCCCGCGGCGTCCCTCAGGTTGAGGTCACCTTTGACATTGACGCCAACGGCATCGTCCACGTCTCGGCCAAGGACAAGGGGACGGGCCGAGAGCAGCAGATCGTGATCCAGTCGTCAGGAGGGCTCAGCAAAGACGACATCGAGAACATGATCAAGAATGCCGAGAAGTACGCAGAGGAGGACCGGAGGAGAAAGGACCGCGTGGAGGCCGTCAACATGGCCGAAGGCATCGTCCATGACACCGAATCCAAGATGGAGGAGTTCAAGGACCAGCTTCCTGCTGATGAGTGCACCAAGCTCAAGGAGGAGATCTCGAAGGTCAGGGATCTTCTGGCCAACAAGGACTCTGAAACGGGAGAGAACATCAAGCAGGCGGCCACCACCCTGCAGCAGGCCTCGCTCAAACTCTTCGAAATGGCCTACAAGAAGATGGCAGCAGAGCGCGACGGCAGCGGCGGCGGCGGCTCGAGCTCAtcagagggagagaagaaagaaggcCAGCAGTAGAGCTTTGCACCACAGTCACTGGGTTTCCATGACAACGGAGGGCCGTCTGGACTGGCTGGATCTCAGTCATTCTCACTATAATATATTATTCTACTGTGTTTTGGCAGTAAATCCTCTAGAGAAAAGATAAATATCAATGTCCTATGATATATCCTGTTTGTAATTTAAATGTCATGtctgtttatttttacaaagcTGTAAGgtagtcctttttttttttcttttttttttgtctaaaacATGATGTAGGTTTCATTACTCCGTCTACGCAGTGGAATCGTTCTTAGTTATCTTGTTGTAACCGTGCGCTCAGAATAGCTTGGCGGTGGGACGTTTCAGAATGAAAGTCTTTAAACATACTGGATCTTTGTCAGAATCTTGTCCCGAGTTCATTCTAGAGAAGCACTGCGCAACTGAATATTTAATTTCATCACCTTCACTCTTTGAAATCTGTAACAATGTATCCGAAGCACTATCTGTTCCTATTGCTTATGTCctctgaggtttttttttttttttaaacagaccGGAGTAGTAGGCCTACTGAGTAATGTGGGGGACGGAGTATAAATACAGCTGTCTATGTGAGGGTCATATTTGATGTAAAAGAACGTAAGGACTTGATCTGTGAGACGGCCCATCTTAAAGTTCTTTGCATCCTCTTTTGCAGCATTCATCCTAAACAGCAGAGTTTGTAAATTGTGAATCAACCTGTCGACTACAGTCAAACTAGAAATCTGTGAATCTGGATGTGGAAATTGCGCGATAGAGGATGAGACCTTAGTTCTCGCTGCCGAGCGATAGCAGGACCAGTTGGAGTTCAACACACCAGTACAGGACTGAGAGTTGATGATGAGCCAAGCTGTGTCCTTTCGCTCAGAAGCTGCCATAAACTGCTCTGTGTGATGTGACCTTTGCTACGTGCCTGCAATATAGTGATCCAGGCCTGCTCTTTATGTGACGGGAGAACTGAGGCCACGTTTTGAAGTGAAATTGGGGTTGAGGGTGTTGAGATAACTTGCTGTTTTTCTAATAAAAATCTGAAACATTG

Function

symbol description
hspa9 Predicted to enable several functions, including ATP binding activity; ATP hydrolysis activity; and misfolded protein binding activity. Acts upstream of or within fin regeneration and hemopoiesis. Predicted to be active in mitochondrion. Is expressed in several structures, including digestive system; eye; midbrain; musculature system; and segmental plate. Human ortholog(s) of this gene implicated in Parkinson's disease and autosomal dominant sideroblastic anemia 4. Orthologous to human HSPA9 (heat shock protein family A (Hsp70) member 9).

NR:

description
PREDICTED: stress-70 protein, mitochondrial

GO:

id name namespace
GO:0030097 hemopoiesis biological_process
GO:0006457 protein folding biological_process
GO:0031101 fin regeneration biological_process
GO:0005524 ATP binding molecular_function
GO:0051082 unfolded protein binding molecular_function

KEGG:

id description
K04043 dnaK, HSPA9; molecular chaperone DnaK

RNA

RNA id representative length rna type GC content exon number start site end site
TU140887 False 480 lncRNA 0.44 1 14782187 14782666
XM_039813030.1 True 3366 mRNA 0.51 16 14767371 14782665

Neighbor

gene id symbol gene type direction distance location
zgc:113425 NA coding upstream 5425 14756244 ~ 14761946 (+)
setd7 setd7 coding upstream 12031 14748836 ~ 14755340 (+)
zgc:154054 NA coding upstream 36798 14703215 ~ 14730573 (+)
nkx1.2lb nkx1-1,LOC104942287,LOC103156535 coding upstream 235004 14525037 ~ 14532367 (+)
hvcn1 hvcn1 coding upstream 390031 14369387 ~ 14377340 (+)
adam19b adam19 coding downstream 6696 14789362 ~ 14811265 (+)
rpl26 rpl26l1,rl26,LOC100708525,LOC105024418,LOC107381811,LOC103040128,LOC106521912 coding downstream 101148 14883814 ~ 14888171 (+)
bnip1a bnip1,LOC101483240,LOC102202434,LOC102780069 coding downstream 109220 14891886 ~ 14897830 (+)
LOC120566895 cpeb4,LOC103355681,LOC107086066 coding downstream 195134 14977800 ~ 14990313 (+)
LOC120567085 NA coding downstream 225289 15007955 ~ 15010090 (+)
G104939 NA non-coding upstream 30798 14735180 ~ 14736573 (+)
G104898 NA non-coding upstream 164552 14602105 ~ 14602819 (+)
G104872 NA non-coding upstream 182035 14527138 ~ 14585336 (+)
G104884 NA non-coding upstream 185404 14580372 ~ 14581967 (+)
G104863 NA non-coding upstream 311893 14440288 ~ 14455478 (+)
G104982 LOC108245816 non-coding downstream 58831 14841497 ~ 14845596 (+)
G105034 NA non-coding downstream 227675 15010341 ~ 15010631 (+)
G105066 NA non-coding downstream 303918 15086584 ~ 15090581 (+)
G105085 NA non-coding downstream 350876 15133542 ~ 15134820 (+)
LOC120567003 NA non-coding downstream 368207 15150873 ~ 15153052 (+)
rell2 NA other upstream 129947 14618394 ~ 14637424 (+)
LOC120566515 NA other upstream 2733539 12028625 ~ 12033832 (+)
mgarpa mgarp other upstream 2737868 12006515 ~ 12029503 (+)
ndufc1 ndufc1,LOC102793397 other upstream 2765721 11997261 ~ 12001650 (+)
LOC120567273 stox2,LOC102298495,LOC100710800,LOC103356674 other upstream 2916968 11778015 ~ 11850403 (+)
atp6v0e1 atp6v0e1 other downstream 106569 14889235 ~ 14891495 (+)
stc2a stc2 other downstream 113295 14895961 ~ 14970124 (+)
vma21 vma21 other downstream 1714634 16497300 ~ 16505658 (+)
nlgn3a nlgn3 other downstream 2017117 16799783 ~ 16926634 (+)
plp1a plp1,LOC101171500,LOC105925114,LOC101482362,LOC103471165,LOC103135636,LOC103135639,LOC104923184,LOC102202602,LOC108242072 other downstream 2168346 16951012 ~ 16957410 (+)

Expression


Co-expression Network