G104939


Basic Information

Item Value
gene id G104939
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 14735180 ~ 14736573 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU140895
TCAGAACTCACATTTCATCAAAAACCTTCATCACTTTATTAAACTAAAGTCATTTCAAATTAGCAACAGAAACAACCATATGTAAACCATGTACAAATGCAACAGGGTCAAATATATTCCAACACGTATGCATGAAATACAGTATGCATATTTTTCGCTGGTTTTATCGAGAGGCTAAACACACAAGTTTAAATAACAAGTGAAGCGTGGTCTACAAACTGTTTAGTGCCATTTACTGCAGCAGcacaaaagtgacaaagacTGGGGCTTTCCTCTCTTCAGAGAGTAACCAGATATCCATTTTTATAACAAAACAAGTACTAATTCTAAGATCTATGGCAGCAATACTGACCAATAAATAACAAAAGCTGAAACGGATGAAATCCCCGGTGCCGTGTGGAGGAGGAGACACACCAGCAGGAGTCTCCAGTGCACCGACAAAGGACAAGATCCCTTCACAAAATCCTCGTAAACATTGGAActctgtggggggggggggggctacaTTATTAATTGCACAAAGGAAGCGTTGCTGCGGGCTCACTAGGGgtatgcaaaaaataaaatctattcacattcgaatcgcgattcaagctctaccgattcaaaaatcgattcatattttatttttataattgtatgtctactgcaatcacatgggaaaagtaacatTTATATActgtgaatcttttttttttaatcgaatcttgagcctaaaaatcaatatcgaatcgtgacattttctgaatcgtgcacccctaggGCTCAGGGTGCAGAATTAGCCATTAGCATGTAGCGATCTGGTTTAATAAGGTGCTGTATGTTGGTCCCTGGTAGAGGATGCGTTTATGACCTGCTGTTACTCAGCAGCTTCCTGGACTGGAGGTTACGGGGACGACAGGTGAAGTTAGATGCGgataataaaagtgaaaaacatgCTTATGAAgagagagcttttttttttttttttttttttccttcacagCTCACACAATGTATTCCTCTTCCACGCTTCCAAAGCTGTGGTGCCGATTGGTCGCTCTGAACAAAGATGTGATGAGGCCTTTGTgttcccaccacacacacacacacacacacacacacactgaatgaaACCACGTTTACGGCACAGGCAGTATTACAAGGGTCCATCATGTGGATCATTAGAGTCCGGTTGGGTCCAGGGCGTGGACTGCGTTCTAGGTCAGGCCTTTCAGAAGTTCTCCTTACTTCCGTTTGCTCTTGGTGTCCGTGGTCTGGAAGACACTGGAGGCAGACATCAGGTTCTCAATGTACTGACCCAGAACCTGGTTCTCTGACTTCAGCTTCAGGTTCTCCTCTTTGACAGCATCCACTCGGGCAGACagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU140895 True 1368 lncRNA 0.43 2 14735180 14736573

Neighbor

gene id symbol gene type direction distance location
zgc:154054 NA coding upstream 4607 14703215 ~ 14730573 (+)
nkx1.2lb nkx1-1,LOC104942287,LOC103156535 coding upstream 202813 14525037 ~ 14532367 (+)
hvcn1 hvcn1 coding upstream 357840 14369387 ~ 14377340 (+)
c10h4orf47 LOC103366528,LOC104953690 coding upstream 376083 14350762 ~ 14359097 (+)
gfra3 LOC103363214,LOC105920031 coding upstream 487998 14191223 ~ 14247182 (+)
setd7 setd7 coding downstream 12263 14748836 ~ 14755340 (+)
zgc:113425 NA coding downstream 19671 14756244 ~ 14761946 (+)
adam19b adam19 coding downstream 52789 14789362 ~ 14811265 (+)
rpl26 rpl26l1,rl26,LOC100708525,LOC105024418,LOC107381811,LOC103040128,LOC106521912 coding downstream 147241 14883814 ~ 14888171 (+)
bnip1a bnip1,LOC101483240,LOC102202434,LOC102780069 coding downstream 155313 14891886 ~ 14897830 (+)
G104898 NA non-coding upstream 132361 14602105 ~ 14602819 (+)
G104872 NA non-coding upstream 149844 14527138 ~ 14585336 (+)
G104884 NA non-coding upstream 153213 14580372 ~ 14581967 (+)
G104863 NA non-coding upstream 279702 14440288 ~ 14455478 (+)
G104862 NA non-coding upstream 301258 14433467 ~ 14433922 (+)
G104982 LOC108245816 non-coding downstream 104924 14841497 ~ 14845596 (+)
G105034 NA non-coding downstream 273768 15010341 ~ 15010631 (+)
G105066 NA non-coding downstream 350011 15086584 ~ 15090581 (+)
G105085 NA non-coding downstream 396969 15133542 ~ 15134820 (+)
LOC120567003 NA non-coding downstream 414300 15150873 ~ 15153052 (+)
rell2 NA other upstream 97756 14618394 ~ 14637424 (+)
LOC120566515 NA other upstream 2701348 12028625 ~ 12033832 (+)
mgarpa mgarp other upstream 2705677 12006515 ~ 12029503 (+)
ndufc1 ndufc1,LOC102793397 other upstream 2733530 11997261 ~ 12001650 (+)
LOC120567273 stox2,LOC102298495,LOC100710800,LOC103356674 other upstream 2884777 11778015 ~ 11850403 (+)
hspa9 hspa9 other downstream 30798 14767371 ~ 14782666 (+)
atp6v0e1 atp6v0e1 other downstream 152662 14889235 ~ 14891495 (+)
stc2a stc2 other downstream 159388 14895961 ~ 14970124 (+)
vma21 vma21 other downstream 1760727 16497300 ~ 16505658 (+)
nlgn3a nlgn3 other downstream 2063210 16799783 ~ 16926634 (+)

Expression


Co-expression Network