G104982 (LOC108245816)


Basic Information

Item Value
gene id G104982
gene name LOC108245816
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 14841497 ~ 14845596 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU140950
GGTTCCACAGGTTCACCCTGAGGTCGTCGGTGGAGATGTACGTCTGAAGGTCCGAGTTGACAGAGATGGAGTTGATGTGGTAGGTGTGGGCATTGCTGAATACACGCCTGGCTGTAGCCTCAACCATCAAGTCCATGGGCTGCAGCACCGGCACCCGTAGCGAGGTGATGGTCGACGGGTCTCTGATCCGTCCGTCGTCATCCTTCAGGTTGTAGCCCTCTGGACGCTTGTCTCTCTCGCTGATTTTCCACAGCTTCACCGTCTTGTCGTTGGTGGAGAGCAGAAAGTAGGCGGCGTTCTGCTGAGGAAGCCATTTGATCTT

Function

NR:

description
PREDICTED: serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU140950 True 322 lncRNA 0.56 3 14841497 14845596

Neighbor

gene id symbol gene type direction distance location
adam19b adam19 coding upstream 30232 14789362 ~ 14811265 (+)
zgc:113425 NA coding upstream 79551 14756244 ~ 14761946 (+)
setd7 setd7 coding upstream 86157 14748836 ~ 14755340 (+)
zgc:154054 NA coding upstream 110924 14703215 ~ 14730573 (+)
nkx1.2lb nkx1-1,LOC104942287,LOC103156535 coding upstream 309130 14525037 ~ 14532367 (+)
rpl26 rpl26l1,rl26,LOC100708525,LOC105024418,LOC107381811,LOC103040128,LOC106521912 coding downstream 38218 14883814 ~ 14888171 (+)
bnip1a bnip1,LOC101483240,LOC102202434,LOC102780069 coding downstream 46290 14891886 ~ 14897830 (+)
LOC120566895 cpeb4,LOC103355681,LOC107086066 coding downstream 132204 14977800 ~ 14990313 (+)
LOC120567085 NA coding downstream 162359 15007955 ~ 15010090 (+)
pin4 pin4 coding downstream 208789 15054385 ~ 15058181 (+)
G104939 NA non-coding upstream 104924 14735180 ~ 14736573 (+)
G104898 NA non-coding upstream 238678 14602105 ~ 14602819 (+)
G104872 NA non-coding upstream 256161 14527138 ~ 14585336 (+)
G104884 NA non-coding upstream 259530 14580372 ~ 14581967 (+)
G104863 NA non-coding upstream 386019 14440288 ~ 14455478 (+)
G105034 NA non-coding downstream 164745 15010341 ~ 15010631 (+)
G105066 NA non-coding downstream 240988 15086584 ~ 15090581 (+)
G105085 NA non-coding downstream 287946 15133542 ~ 15134820 (+)
LOC120567003 NA non-coding downstream 305277 15150873 ~ 15153052 (+)
LOC120567004 NA non-coding downstream 355345 15200941 ~ 15204702 (+)
hspa9 hspa9 other upstream 58831 14767371 ~ 14782666 (+)
rell2 NA other upstream 204073 14618394 ~ 14637424 (+)
LOC120566515 NA other upstream 2807665 12028625 ~ 12033832 (+)
mgarpa mgarp other upstream 2811994 12006515 ~ 12029503 (+)
ndufc1 ndufc1,LOC102793397 other upstream 2839847 11997261 ~ 12001650 (+)
atp6v0e1 atp6v0e1 other downstream 43639 14889235 ~ 14891495 (+)
stc2a stc2 other downstream 50365 14895961 ~ 14970124 (+)
vma21 vma21 other downstream 1651704 16497300 ~ 16505658 (+)
nlgn3a nlgn3 other downstream 1954187 16799783 ~ 16926634 (+)
plp1a plp1,LOC101171500,LOC105925114,LOC101482362,LOC103471165,LOC103135636,LOC103135639,LOC104923184,LOC102202602,LOC108242072 other downstream 2105416 16951012 ~ 16957410 (+)

Expression


Co-expression Network