hvcn1 (hvcn1)


Basic Information

Item Value
gene id hvcn1
gene name hvcn1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 14369387 ~ 14377340 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039813803.1
TTCTGCTCCAAGTAGAGACTTGTGTCTctgcagaggagcagagagtGTTTGGAAGGACAGAGTGGGCCAGAACAAGGTAAAACAGAACAAGGTGATCTGAGCTGGGGGTCTGGAGCCTGGCGCCATGGCTCGGTACCTGGGCTACTTCACCGCTGTGGGCGACGTCCAGCCAGTCcgcctggaggaggaggagctgcaCGTGACCAGCGAGGAGCTGAGTCCCGCCACGGGGCAGTTCCCACCCACGGCGACCTTCAGGGAGTCCCTACAAAGGCTCTATGGCTCCGAGCGCTTCCAGgtggtggtggtgtgtttggTCATCCTGGACGCCATCTTTGTTCTTGCCGAGCTGCTCATCGATCTGTCTGTTATCAAGCTGGAACATGGCCACCTTGCTCCGGAGGTGTTCCACTACCTGAGCCTGGCCGTTCTCACGTTCTTCATAGTGGAGCTGCTCGGTAAGCTGTTTGCCTACCGCCTGGAGTTCTTTCAACACAAGTTTGAGGTGTTTGACGGTTTGGTGGTGGTGCTTTCCTTCGTGTTGGACATTGTTTTCATCTTCCATGAAGACGAGTTTGTTGGGACGGGCCTGCTCATCCTACTGCGACTCTGGAGGGTGGCCCGAATCATCAACGGTATCCTGGTGTCGGTGAAGAACCGTGCAGACCACAAGCTCCACAAGCTGAAGGAGAGCTATGACCACCTGGTTCAGAGAGTCACGCAGCTGCAGGAGCGCTGCGACAAACTGGAACAGGAGAACCAGAGACTGGAAGCCCTCCTGAAGAAGCACGCCACAGACTCCTAACTCCTGGAGCCCGCTGCTGTGGAGCTACTCTTCAATCTCATTTATATCACGTACCTTTGGGCACTCTTTCAACCTATAAATTCCATGATGAACTTTACTTTTAGACCTGATTTCAGTATCCCTTAACCATTGCTACATTACCTGaagagaaatatatattttttaatatctgTATCAGTAGATCCATATCCATGTCAAAGGTTATGTCGAATGAATGTCAGATGCTACCACTCCATAAAGCCACGATGGCCTCAATTTCTAAGTAAATATTGGAAACATTCCTCCCACTGATGACTTGTACATAAAGCTAGATGTGCGTCTGCTTAGTGACATTTCAAAAAGAACTGTatgttgtgtaaaaaaaaaaaagaacatgtcaataaatgaagtg
>XM_039813804.1
cagaggagcagagagtGTTTGGAAGGACAGAGTGGGCCAGAACAAGGTGATCTGAGCTGGGGGTCTGGAGCCTGGCGCCATGGCTCGGTACCTGGGCTACTTCACCGCTGTGGGCGACGTCCAGCCAGTCcgcctggaggaggaggagctgcaCGTGACCAGCGAGGAGCTGAGTCCCGCCACGGGGCAGTTCCCACCCACGGCGACCTTCAGGGAGTCCCTACAAAGGCTCTATGGCTCCGAGCGCTTCCAGgtggtggtggtgtgtttggTCATCCTGGACGCCATCTTTGTTCTTGCCGAGCTGCTCATCGATCTGTCTGTTATCAAGCTGGAACATGGCCACCTTGCTCCGGAGGTGTTCCACTACCTGAGCCTGGCCGTTCTCACGTTCTTCATAGTGGAGCTGCTCGGTAAGCTGTTTGCCTACCGCCTGGAGTTCTTTCAACACAAGTTTGAGGTGTTTGACGGTTTGGTGGTGGTGCTTTCCTTCGTGTTGGACATTGTTTTCATCTTCCATGAAGACGAGTTTGTTGGGACGGGCCTGCTCATCCTACTGCGACTCTGGAGGGTGGCCCGAATCATCAACGGTATCCTGGTGTCGGTGAAGAACCGTGCAGACCACAAGCTCCACAAGCTGAAGGAGAGCTATGACCACCTGGTTCAGAGAGTCACGCAGCTGCAGGAGCGCTGCGACAAACTGGAACAGGAGAACCAGAGACTGGAAGCCCTCCTGAAGAAGCACGCCACAGACTCCTAACTCCTGGAGCCCGCTGCTGTGGAGCTACTCTTCAATCTCATTTATATCACGTACCTTTGGGCACTCTTTCAACCTATAAATTCCATGATGAACTTTACTTTTAGACCTGATTTCAGTATCCCTTAACCATTGCTACATTACCTGaagagaaatatatattttttaatatctgTATCAGTAGATCCATATCCATGTCAAAGGTTATGTCGAATGAATGTCAGATGCTACCACTCCATAAAGCCACGATGGCCTCAATTTCTAAGTAAATATTGGAAACATTCCTCCCACTGATGACTTGTACATAAAGCTAGATGTGCGTCTGCTTAGTGACATTTCAAAAAGAACTGTatgttgtgtaaaaaaaaaaaagaacatgtcaataaatgaagtg

Function

symbol description
hvcn1 Enables voltage-gated proton channel activity and zinc ion binding activity. Acts upstream of or within proton transmembrane transport and response to zinc ion. Is integral component of plasma membrane. Is expressed in several structures, including eye; heart; liver; neutrophil; and pleuroperitoneal region. Orthologous to human HVCN1 (hydrogen voltage gated channel 1).

NR:

description
PREDICTED: voltage-gated hydrogen channel 1

GO: NA

KEGG:

id description
K22644 HVCN1, HV1; voltage-gated hydrogen channel 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039813803.1 True 1196 mRNA 0.50 6 14369387 14377340
XM_039813804.1 False 1151 mRNA 0.50 6 14369417 14377340

Neighbor

gene id symbol gene type direction distance location
c10h4orf47 LOC103366528,LOC104953690 coding upstream 10290 14350762 ~ 14359097 (+)
gfra3 LOC103363214,LOC105920031 coding upstream 122205 14191223 ~ 14247182 (+)
hars LOC103363215,LOC101173848 coding upstream 231480 14120312 ~ 14137907 (+)
LOC120567114 LOC100707945,LOC102303940,LOC101472197,LOC103356681 coding upstream 275828 14084826 ~ 14093559 (+)
LOC120567153 NA coding upstream 1317282 13050448 ~ 13052105 (+)
nkx1.2lb nkx1-1,LOC104942287,LOC103156535 coding downstream 147697 14525037 ~ 14532367 (+)
zgc:154054 NA coding downstream 325875 14703215 ~ 14730573 (+)
setd7 setd7 coding downstream 371496 14748836 ~ 14755340 (+)
zgc:113425 NA coding downstream 378904 14756244 ~ 14761946 (+)
adam19b adam19 coding downstream 412022 14789362 ~ 14811265 (+)
LOC120567456 NA non-coding upstream 4929 14361817 ~ 14364458 (+)
LOC120567497 NA non-coding upstream 5830 14363360 ~ 14363557 (+)
G104848 NA non-coding upstream 45228 14323919 ~ 14324159 (+)
G104847 NA non-coding upstream 48712 14320468 ~ 14320675 (+)
G104794 NA non-coding upstream 533839 13835078 ~ 13835548 (+)
G104860 NA non-coding downstream 33848 14411188 ~ 14411831 (+)
G104862 NA non-coding downstream 56127 14433467 ~ 14433922 (+)
G104863 NA non-coding downstream 62948 14440288 ~ 14455478 (+)
G104872 NA non-coding downstream 149798 14527138 ~ 14585336 (+)
G104884 NA non-coding downstream 203032 14580372 ~ 14581967 (+)
LOC120566515 NA other upstream 2335555 12028625 ~ 12033832 (+)
mgarpa mgarp other upstream 2339884 12006515 ~ 12029503 (+)
ndufc1 ndufc1,LOC102793397 other upstream 2367737 11997261 ~ 12001650 (+)
LOC120567273 stox2,LOC102298495,LOC100710800,LOC103356674 other upstream 2518984 11778015 ~ 11850403 (+)
fbxo38 fbxo38,LOC104946725 other upstream 2683010 11650517 ~ 11686377 (+)
rell2 NA other downstream 241054 14618394 ~ 14637424 (+)
hspa9 hspa9 other downstream 390031 14767371 ~ 14782666 (+)
atp6v0e1 atp6v0e1 other downstream 511895 14889235 ~ 14891495 (+)
stc2a stc2 other downstream 518621 14895961 ~ 14970124 (+)
vma21 vma21 other downstream 2119960 16497300 ~ 16505658 (+)

Expression


Co-expression Network