c10h4orf47 (LOC103366528,LOC104953690)


Basic Information

Item Value
gene id c10h4orf47
gene name LOC103366528,LOC104953690
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 14350762 ~ 14359097 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814426.1
CTGAAGTGTagtcagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagattccAATTAGTCATTACACGTCAACCACAGTGTATGAAGATGCCATCCGGTGATGGGAAGAGTGACATGGAGCGTCTGGGTATCTTTAAAGAGATGAGCTACATCTCTGTAGGAGACAAGTACACTCCACCCACCATCCGTCCGTGTAATGAGTCAGCGTATCGTAGCCGCCAGATGCAGGCGGGTGTCGCTAAACAACGATGTGCTCTGCAGAACGGCTTCTTCGACAAGTCCTTTAAACGGATATTTGAACGTGAAGCGCTGAGTGACCCGCTGAGACTGGCCCGACAGAACCGCATCCAGCTGGCCAATAAGAACCTGGGCAAGGCCTTCCTGCCCTGTAACGGGGTCAAGAAGCCCTGTGGTTCAGGGAGTTACTATGGGACTCTGTCAGGACCAGTTGAAGCCATGAGTCCACTGTCAGTGGCCCAAAAATCCCATCGCTCTCCTGGACGCAACATTGTCACCTCACCTCCCAAGAAAGGCAGTGGTTACAGGTTTATCTATCCCAATGTGACACTGTCCAAAGTTGAGCTGTATGCCTCAGACCCCTACAGCAGAGCCAAAGAAGTACTGGAGAAGGAGGCAGCAATCCATCGCTCCAAGTTAAGAGATGGTCCGTTCAAACTCAACCTTCACCCCGGAGATTATTTCCAAAGCAATCCATACCGCAGTGACAAGCCACTCCCACCAGCATACAAGCCCCTCCCAGCTGCACAGAAGCTCTCTGCGGTCCCCTTCAAGCCCCCGTCCCCCAGCAAAAAGGTTGGAGGAATGAAAGCGGGGACGTTTGACCTTTATCCCTTACATTCGGCTGATCCGTACGTCATTCGCCGCTCCAAACCAACCAAGCAAGAGCCAATCTTCCGTCCTGCTCCTGGTCCTAAGAGCGTCCCTGTCAAGAGTATCATCACCGTCAATGTGAACAGgaGTGTTCACTCTGCAAACTACACCTCAACCATTCCAACTGTGATGACCTTCTGACTACATTACCCATACCTCACCAACATTAGCTTCACTATCAGCCCTAAGATATGTACAGATATAATAAGATGAA
>XM_039814427.1
CTGAAGTGTagtcagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagattccAATTAGTCATTACACGTCAACCACAGTGTATGAAGATGCCATCCGGTGATGGGAAGAGTGACATGGAGCGTCTGGGTATCTTTAAAGAGATGAGCTACATCTCTGTAGGAGACAAGTACACTCCACCCACCATCCGTCCGTGTAATGAGTCAGCGTATCGTAGCCGCCAGATGCAGGCGGGTGTCGCTAAACAACGATGTGCTCTGCAGAACGGCTTCTTCGACAAGTCCTTTAAACGGATATTTGAACGTGAAGCGCTGAGTGACCCGCTGAGACTGGCCCGACAGAACCGCATCCAGCTGGCCAATAAGAACCTGGGCAAGGCCTTCCTGCCCTGTAACGGGGTCAAGAAGCCCTGTGGTTCAGGGAGTTACTATGGGACTCTGTCAGGACCAGTTGAAGCCATGAGTCCACTGTCAGTGGCCCAAAAATCCCATCGCTCTCCTGGACGCAACATTGTCACCTCACCTCCCAAGAAAGGCAGTGGTTACAGCTATCCCAATGTGACACTGTCCAAAGTTGAGCTGTATGCCTCAGACCCCTACAGCAGAGCCAAAGAAGTACTGGAGAAGGAGGCAGCAATCCATCGCTCCAAGTTAAGAGATGGTCCGTTCAAACTCAACCTTCACCCCGGAGATTATTTCCAAAGCAATCCATACCGCAGTGACAAGCCACTCCCACCAGCATACAAGCCCCTCCCAGCTGCACAGAAGCTCTCTGCGGTCCCCTTCAAGCCCCCGTCCCCCAGCAAAAAGGTTGGAGGAATGAAAGCGGGGACGTTTGACCTTTATCCCTTACATTCGGCTGATCCGTACGTCATTCGCCGCTCCAAACCAACCAAGCAAGAGCCAATCTTCCGTCCTGCTCCTGGTCCTAAGAGCGTCCCTGTCAAGAGTATCATCACCGTCAATGTGAACAGgaGTGTTCACTCTGCAAACTACACCTCAACCATTCCAACTGTGATGACCTTCTGACTACATTACCCATACCTCACCAACATTAGCTTCACTATCAGCCCTAAGATATGTACAGATATAATAAGATGAA

Function

NR:

description
PREDICTED: UPF0602 protein C4orf47 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814426.1 True 1141 mRNA 0.49 8 14350762 14359097
XM_039814427.1 False 1135 mRNA 0.49 8 14350762 14359097

Neighbor

gene id symbol gene type direction distance location
gfra3 LOC103363214,LOC105920031 coding upstream 103580 14191223 ~ 14247182 (+)
hars LOC103363215,LOC101173848 coding upstream 212855 14120312 ~ 14137907 (+)
LOC120567114 LOC100707945,LOC102303940,LOC101472197,LOC103356681 coding upstream 257203 14084826 ~ 14093559 (+)
LOC120567153 NA coding upstream 1298657 13050448 ~ 13052105 (+)
pcdh18b LOC101076687 coding upstream 1660962 12677186 ~ 12689800 (+)
hvcn1 hvcn1 coding downstream 10290 14369387 ~ 14377340 (+)
nkx1.2lb nkx1-1,LOC104942287,LOC103156535 coding downstream 165940 14525037 ~ 14532367 (+)
zgc:154054 NA coding downstream 344118 14703215 ~ 14730573 (+)
setd7 setd7 coding downstream 389739 14748836 ~ 14755340 (+)
zgc:113425 NA coding downstream 397147 14756244 ~ 14761946 (+)
G104848 NA non-coding upstream 26603 14323919 ~ 14324159 (+)
G104847 NA non-coding upstream 30087 14320468 ~ 14320675 (+)
G104794 NA non-coding upstream 515214 13835078 ~ 13835548 (+)
G104791 NA non-coding upstream 577166 13773357 ~ 13773596 (+)
G104771 NA non-coding upstream 805155 13545325 ~ 13545607 (+)
LOC120567456 NA non-coding downstream 2720 14361817 ~ 14364458 (+)
LOC120567497 NA non-coding downstream 4263 14363360 ~ 14363557 (+)
G104860 NA non-coding downstream 52091 14411188 ~ 14411831 (+)
G104862 NA non-coding downstream 74370 14433467 ~ 14433922 (+)
G104863 NA non-coding downstream 81191 14440288 ~ 14455478 (+)
LOC120566515 NA other upstream 2316930 12028625 ~ 12033832 (+)
mgarpa mgarp other upstream 2321259 12006515 ~ 12029503 (+)
ndufc1 ndufc1,LOC102793397 other upstream 2349112 11997261 ~ 12001650 (+)
LOC120567273 stox2,LOC102298495,LOC100710800,LOC103356674 other upstream 2500359 11778015 ~ 11850403 (+)
fbxo38 fbxo38,LOC104946725 other upstream 2664385 11650517 ~ 11686377 (+)
rell2 NA other downstream 259297 14618394 ~ 14637424 (+)
hspa9 hspa9 other downstream 408274 14767371 ~ 14782666 (+)
atp6v0e1 atp6v0e1 other downstream 530138 14889235 ~ 14891495 (+)
stc2a stc2 other downstream 536864 14895961 ~ 14970124 (+)
vma21 vma21 other downstream 2138203 16497300 ~ 16505658 (+)

Expression


Co-expression Network