G21257


Basic Information

Item Value
gene id G21257
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 32880399 ~ 32884968 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU28928
CAGTTGGTAGACGTTTGAACTTCACTGTAAACTTAACTATAGTTAGTAGTATATAGTTAAAGTTCAGCTGACCTCTGCGTTTCCTCTGTGGATTTTGTGCAGTTGCAACAGCCTGTATGGAGAGCCGTAGCGGGTGTTAAGGTAGTGTTGTACCACTTGGGCTGCCCTCCGAGCAGGGTAGTGATTGCTGTCCAAGGATCTCGGTTTTCTCCGCTGTCTCTGGTACGCTGTTGGGGTGAGCCCTCATGTCCGCTGAGTCAGCTTCAGGTCCGACGGTCACACTGGGGCTCCCACTTATCCCAGTTAACACAGCGAGAACCACGATGATCCTCAGACTCATTATCGTAAGCTGTAAAACACAGATGCTAGAGAAAAGGGGAACAACACTTCTGTGAAAGAGCTCAGGGAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU28928 True 410 lncRNA 0.50 2 32880399 32884968

Neighbor

gene id symbol gene type direction distance location
c2h19orf54 clg14h19orf54,LOC102791611,LOC102297608,LOC102205645,LOC101483057,LOC104956263 coding upstream 32339 32842421 ~ 32848060 (+)
map3k10 map3k10,LOC102787573 coding upstream 211846 32628832 ~ 32668553 (+)
LOC120545987 LOC101069675,LOC103364515,LOC107380274,LOC108240955 coding upstream 340101 32534436 ~ 32540298 (+)
six9 LOC104961124,LOC100703566,LOC101476199,LOC102305195,LOC102786478,LOC103364516,LOC102210161 coding upstream 352556 32524837 ~ 32527843 (+)
six5 six5,LOC104961111,LOC102200980 coding upstream 355891 32516358 ~ 32524508 (+)
wdr53 wdr53 coding downstream 6082 32891050 ~ 32894361 (+)
cux1b cux1 coding downstream 48555 32933523 ~ 32997587 (+)
LOC120548751 sh2b2 coding downstream 116636 33001604 ~ 33030319 (+)
bud23 wbscr22 coding downstream 148943 33033911 ~ 33040994 (+)
rabgef1l LOC103357827 coding downstream 267993 33152961 ~ 33160862 (+)
G21253 NA non-coding upstream 28532 32849324 ~ 32851867 (+)
G21228 NA non-coding upstream 59153 32754573 ~ 32821246 (+)
G21234 clasrp non-coding upstream 102370 32773601 ~ 32778029 (+)
G21231 NA non-coding upstream 111362 32765880 ~ 32769037 (+)
G21207 NA non-coding upstream 128108 32671859 ~ 32752291 (+)
G21400 NA non-coding downstream 333054 33218022 ~ 33231483 (+)
G21417 NA non-coding downstream 395439 33280407 ~ 33280664 (+)
G21418 NA non-coding downstream 395988 33280956 ~ 33281661 (+)
G21419 smc4 non-coding downstream 397153 33282121 ~ 33282936 (+)
G21427 NA non-coding downstream 447308 33332276 ~ 33344101 (+)
G20956 NA other upstream 1157913 31719505 ~ 31722486 (+)
G20954 strn4 other upstream 1166520 31706623 ~ 31713879 (+)
si:dkey-202l22.3 LOC104943829,LOC104918037,LOC103136259,LOC106934030,LOC106953837 other upstream 1248759 31620993 ~ 31631640 (+)
fxyd6 LOC104918006,LOC103361032 other upstream 1422788 31448803 ~ 31457611 (+)
tmprss13a NA other upstream 1435046 31433345 ~ 31445353 (+)
G21267 NA other downstream 11656 32896624 ~ 32897563 (+)
LOC120573710 col26a1,LOC102078035 other downstream 13389 32898357 ~ 32919023 (+)
stx1a stx1a,LOC102292079,LOC102198818,LOC102795677,LOC108240947 other downstream 156431 33041399 ~ 33129974 (+)
trim59 trim59,LOC102781275 other downstream 377778 33262746 ~ 33274010 (+)
LOC120547286 mbnl1 other downstream 958396 33843364 ~ 33919945 (+)

Expression


Co-expression Network