LOC120572910 (LOC103364401,LOC104941230)


Basic Information

Item Value
gene id LOC120572910
gene name LOC103364401,LOC104941230
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 34977000 ~ 34999209 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039822433.1
GGCCAATAGGAGTTGAGAGGCAGAGTTGTCCTCCTGGCCGCCATTAAAGAATTCAATCCATGAACTGAAAAAATGGAAATCTGCAGGACCCATGGATAAGGCAGAGAAAAGTAGCCGATGAGTAGTCTCGCTAATTTGGCATTTCACCCGTTTGAAGAGTAGTTTTACTATGACGGAGCCCTGTGGTGGTTTTAGCGAAAAGGAGGGCGGTGTAGCTAATTGTTTTATTTAGCTAGCGTTGGAGCTCTGGTATGTTAGCTTTTGTGCTAGTAGGCTAGGAGAGACCAGGGGGAGGGGAGAGttcctttgctttgaaattgtttCAGATCAGCTAGCTGgtattagcattagcattagcacaCCAGGGACTAAGCTTTTGGGGTGAAGTTTTTTAGTTTTCGAGCTCGTATTTTTTATTGCGCATCTAACTTTTCTGGTGTTGGGTTTTAGTCTGTTCAGGTCATGTTAACGTTGACTATTTGATGTTAAGGTAATGTAGCAGCAAGCTTGCGGCTAAGCAGATCAGACAATACATTTCAAACAGGATTGATGAATCGAATAGCTAAAAGCTTACAGTTGACGCTATCTGGCTGCctgtctaacgttagcttagccaCCGGGCTAGTGGTGTCTAGCGCTGGCTAGAAGTTGTCTGGTTgactagcggtagctagctgtAGCTAGCAAGTTGGTCAGCGCTTTAACGGGATAATCAAAACTGAACCCCACTTCGCCAGCGAGTTAACTGGATCAGCTATTGCCCCCGATGGTGATTGAGACAATGGACTTTAACGTTACAACCACGCAGTGAAAGGATGAGTTCGTGCTTTGTACCAAACGGGGCCAGTTTGGAGGACTGCCACTCCAATCTCTTCTGCCTGgCGGATTTGACCGGAATAAAATGGCGacgttttgtgtggcagggacCCACCTCTTCGCCCATCCTTTTCCCGGTCACCGAAGAGGACCCTATCTTGTGTAGTTTCAGCCGATGCCTGGCGGCAGATGTGCTAAGTGTGTGGAGAAGGCACCACACCCCGGGTCGTAGAGAGCTCTGGCTTTTCTGGTGGGGGGATGACCCCAGTTTTGCTGAGCTTATTCATAATGAGCTTTCAAGTGAGGAGGATGGGGAGTGGGAGAGTGGCCTGTCCTACGAATGTCGAACGCTCCTGTTCAAAGCCATCCACAACCTGTTGGAGCGGTGTCTCATGAACCGTGGCTTTGTTCGCATCGGCAAGTGGTTTGTTAAGCCATACCAGAAGGAGGAGAAGACCATTAATAAAAGCGAGCACCTGTCCTGCGCATTCACCTTCTTTGTACACGGCGACAGCAACGTGTGCACTAGTGTGGAGATCGCTCAACATCAGCCTCTTCAGCGCCTGAACGAGGAGCATCTCAGCCTCGCCCAGCAGAGCTCCAGCCCCTTGCAAGTCATCCTGAGCCCATACGGCTTGAATGGGACCCTCACCGGACAGGCTTTTAAGATGTCAGACCACCCTACTCAGAAGCTCATAGAAGAGTGGAGGCAATTCTATCCCATCAGCCCCAATCCCAAGGAGGTCCCGGAAGACAAGATGGAGGATACGGACTGGGAGGATGACTCCCTGGCAGCTGTGGAGGTCCTTGTCGCGGGAGTGAGGATGGTTTACCCTTCCTGCCTGGTGCTTCTCCCCCTGTCGGACCTCCCTCCTGTGGTCCCTCAGGGCTCAGTCAACACCTCAGGAAGCCTGTGTGGTGCTCAGCAGGGCCAGGCTGCTCACAGGGATCCTGCCATGTCCTCTGTCACTCTGACTCCTCCAACGTCCCCAGAGGAGGCCCAGACTGATTATCAGCCTGCCCAGAGGTGGCTCAAGTTGTCCGCTGCGTCGGATGGCTACAGCTCTAACAACACTCTTCATGGGGGTAAAATCCCTCGCAGGCTGGCCAGCCAGATGGTGGAGTCTGTGTGGCAGGAGTGTAACATAAACCGTACAGGGAACAAGAGGAAGTTTACTACATTGACCAATGGGACCTGTGAAGAGGAGTCGGACAAATCTGGACTTTGGGATTTTGTGGAGTGTACTCACAGGCCACATTGCACCTGCTCGAGACATAAGAGTCAGAAACAGCGATCCAGCAGCACCTCAGGACACCCGCCTTCATCAGGCCAGCCTGCCCAGCCGGCCCCCAAGCACAAGCTGGGCGAGAAGCTGGAAAAGGGGGAGAAGCAGCAGAAGAGGCCGCAGACGCCTTTCCACCACCGCAACTCTGTGAGCGAAGAGCCGTCCCTGGAGCCACAGACCCAGAGGCTATGTTTAAGATCACAGGAGGAGGGCTCGTATCCCAGCCTGCATCACATAGACACAGTGCCCTCCAAAGCCCCTACGCTGCACACACACGGTCCCCCTGCAGACCTCGTCGGATCCCCGCCTCCCCCGCCCCTCAGCCCACATCCCTGCGATCACGTCGAAGGCGACATGACTCCAGGTGGCATGAAGAACTCGTCCACAcccattcaccaaccgttctacCCGCCGTCAGTGGAGCCCTGTCTGCTGCCACAGAAGAGCTCATCCGAGGGGCCTCAGCTGGAGAACATGCCTATGCCTCTGGCCTTCCCCCCAGCCTACAGTGAAACCTTGGAACCCACCGTCTTTGTGGGTTCAGCCATCAACCCCAATGAAGACTCCACCCACAACCCTTGGAAGTATTTTAACTTGCCCAGGAAGAAGGCCTTTAACTTCCTGACGCCCCAGCTACCTGTGGATAAAATACGAGATGATTCTGGGGGAGGCGGAGGAACAGAAAGTGTCGTGTCTGTCACCGAGTTGATGTCGGGCTCCGCGCACCCCCTGAAGGTGTCCCAGGAGCTGATCAAGACTTACGCCCAGCGGAGAAACAGCCATCTGGCCTCTGCCACAGGAGACAGAGAACACGGTGATGAGCCAGACCCTTACGCCTTCGTAGAGGGAGATGAGGAGTTCAGCTTCACCGAGAAGAAGGACAAGTCTGGATCGGAGAGAGAGGGCAACAAGAAACACAAGGTCGACGAAGGAGCTGGAACAGCAGACGATGGTCAGGGTCCATCAGGCAGTAAACCTTTAGCCTCCACCAGCCTTATCCACGAGAACGACTTGGCTGTGTCCTACAGCGACCTGGATAAAATCTTCAATTCGGATGAAGATGAGCTAGCGCCTGGATCCAAAAGAGCTGGAGTTGGAACAGAAGACAAGTTTGGCTGTAAAGACAATAAAGCAGCCGCATTGGACCCCCTGTCCTGCATAAGCTCAGCGGACCTGCACCAGATGTTTCCCACCCCGCCCTCCCTGGAGCAGCAGGGTTACTCCCCCATGAACTCCGGGAGCAAGGATAGCATGGAAGCAGGGACGGGCCTCACCCTGTTGGATGGCAGCCAGCTCAACAACCACTTCAAgatggaggtggaggagggatTCTGCAGCCCGAAGCCATCCGAAATAAAGgaCTTCTCCTTTGTATACAAGCCGGAGACGTGTCAGTTGTTAATCGGCTGTTCCATGTACGCACCCCTGAAGATGCTACCCAGCCAGTGTATGTTGCCTATCAAAGTGCCAGAAGACTGTGTGTACACGCCCAGCTGGACCATGGGCAAAATGGAACTGATACCCCCAGTAACGAATGTCAATCTCCTCACCAAAGACAGTAACGTCCCCAGTGTGGAGCCAGACTACAGCCAGACCTACACCCCGCAGACCCACACACCCTTCATGTCCAGCAGTGCCCCTCCCAGCAACAGCGGCACAGGCATCCTGCCCTCCCCAGCTACGCCGCGGTTCTCCGTGCCCACGCCTCGCACGCCGCGCACTCCACGGACTCCCCGCGGCCCAGCGAGCGTCCAGGGCTCGCTCAAGTATGACAACTCTGACCTTTACTCCCCCGCCTCCACTGCCTCCACCTGCCGACCACTCAGCTCCGTTGAGCCGGCCACCGTACCTTCCATCCCCGAGGCTCACAGTCTCTACGTCACCCTCATTCTCTCCGAGTCGGTCATGAACCTCTTCAAGGACTGCAACTTTGACAGTTGCTGCGTGTGCGTCTGCAACATGAACATCAGAGGAGCGGACGTAGGCGTGTACCTCAAGGACAACGGCGAGGCCCAGTACCCCTGCACTTGCGGCTTCAGCGCCGTCACCAATCGCCGCTTTGGCCAATTGGCCGGGCTGTTTCTGGAGGACGAGCTGGATGTGGTGGTACGGGGCTCGGACGCTAGTCGAGACACTGAGCGGTGTTTCGAAGAGCTGCGAGCTTCCACGACGCACAAGGCCGGCAGCCTGACAGAGAAACCTCCGGATGAGCtaatcctgctgctgcaggaccaGTGCACCAACCCTTTTGCCCCGATGGCGGGCGTGGAGTACCCGAAGCAGAGCTCTGCCCCCAGTTCATTTCTGAGGGTGGAAGAGAGGGACTGTTATAATGACTGCTACATGGCACTGGAGCATGGCAGGCAATTCATGGACAATATGTCAGGAGGCAAAGTAGATGAAACACTAGTGAAAAGCACCTGTCTTCATCAATGGCCAAAAtgcaaatCAGCAGACATGAGCAAACTATTCTCTCAGGATGTCCTGCGGGTGTTGTTGTCCCTCCAGCCTGTGCTGCAGGACACCATTCAGAAGAAGAGGAGTGTGCGCTCCTGGGGCGTTCAGGGACCGCTCACTTGGCAACAGTTTCACAAGATGGCTGGGAGGGGATCATATGGTACAGATGAGTCTCCTGAGCCTCTGCCCATCCCCACTTTTTTGGTCGGTTATGAGTATGATTTTGTGGTGCTGTCACCTTTTGGGTTGCCCTACTGGGAGAAGCTTCTTCTGGATCCTTTTGGTTCCCAGAGAGATGTGGGCTATGTTGTCATCTGCCCAGAAAATGACGCTCTGCTCCGCGGGGCAAAGTCCTTCTTCAAAGATCTGAGTAGTATATATGAGGCATGCCAGCTTGGGCAACACAGGCCCATCTGTAAGAGTCACCCAGAGGGCGTATTGAAAGTCGGCACCACAGAAGGCAAGAGCATGGCAGAGCAGCCCCTTAGTGACTGGTTTCTTAAGATGGCTGCCAGAGACGGCAACAATGAAGCCTTTAATAAGCTCAAACTCTTTGCTCAAGTGTGCCGTTATGATCTAGCGCCATACCTGTCAGAGCAGTCTTTGGATAGCTCCCTATTGTCCCAGCGCAGCCCGGTTGTggcttcctcctccccccagaCCTCCAGCGCCTCCTCAGGACCCCAGAGCACCAACACTACCAGCACCAGCTCTGCCCAGCCGGCCCCGGTCAACAGCACCCCTCCCTCCTCAGGCTCCCAGACTATCGGGGGAATGGCCGCAGCCAAGCCAAGCTCTTACTCGCCGTTTGGTACAACAGGCTTGCAGGGCGGCACGTCTCAGAATGGGCCCCAGTCGAACCCACAGGTTGCAGGGGGGCTGGCAGAAAACGGACCCTCTGCCAACCAGCCTCAAGGTCCCACTGAGTCGCCAGAGAGcACAATGGAGAGAGACAAAGTGGGGAAGCCAACAGACGGAGAATCCCATGCTGTGTCTTACCCGCCTGCCATTGTGGTGTATATCGTCGACCCCTTCAGCTACGAAGACGCCGTCAGAGAGGTCCACTCCAGCGCCTACACACTGGGCCTACTGCGCTGCTACATGGAGATGCTCCAGTTCCTGCCTGCATACATCAGAAACGCTGTCTCAGTACAGATCGTTCCCTGCCAGTATCTGCTGCAGCCGGTGCGCAGTGGGGAGCGTCACCTCTACGGCCAGCACCTCAAGTCGCTGGCCTTCTCAGTGTTCACTCAGTGTCGTCGGCCTCTGCCCAACTCCACTAACTTCAAGGCTCTGACGGGCTTTGGACCCGGTCTTGCCATCGACATGGCACTCAAGAACCCAGAGAGGCCCGAGTGTTTGCGTCTGTATACACCGCCCTTCATTTTGGCTCCTGTGAAAGACAAGCAGACAGAGCTCGGGGAGACGTTTGGCGAGGCCTCCCAGAAGTACAACGTCCTGTTTGTCGGCTACTGTCTGTCCCATGACCAGCGCTGGCTGCTGGCCTCCTGCACCGACCAACACGGAGAACTGCTGGAGACCTGCATCATTAGTATTGATGTACCCAATCGGGCTCGCAGGAAAAAGGGCTCAGCCAGGCGAGTGGGCTTACAAAAGCTGTGGGAGTGGTGTCTCGGCCTGGTGCAGGTGACATCACTGCCATGGAGGGTGGTCATTGGACGGCTGGGTAGAATGGGCCACGGCGAGCtgagagACTGGAGTATTCTGCTGAGCAGGAGGAACTTGCAGTCTCTTAGTAAACGTTTGAAGGAGACGTGTAGGCTGTGTGGCATCTCTGCTGCCGACACTCCCAGCATCCTTAGCGCCTGTCTGGTTGCCATGGAGCCCCAGGGTTCCTTTGTCATCATGCCAGATTCCGTGTCAACAGGTTCAGTGTTTGGCCGCAGCACCACACTCAACATGCAGACGTCGCAGCTGAGCACACCTCAGGACACATCCTGCACACACATCCTGGTGTTCCCCACCTCAGCCATGGTGCAGGTCAACACTAACACTTCAGAGCCCATTGACATCAACTTCAATCCCATAAATCCCGATGGATCTGATGGAATGGGCATCTTTGACCTGTTTGACAACGACATGGTGGATCCAGACCTCATCAACATCTTACCCAACTCCCCCACAACCTCGCCTGTTCACTCCCCTGGCTCCCACTACCACCAGGGGGGAGATGGAAACAAGGGCCAGAGTGCCGACCGCATGGAGTCCCATGAGGAGGCTCTGAACATCCTGCAGCAGCCGATGGCGCTGGGCTACTTTGTCTCCACAGCCAAGGCTGGACCACTGCCCGACTGGTTCTGGTCTGCCTGCCCTCAAGCCCAGAACCAGTGCCCGCTCTTCCTCAAGGCCTCTCTGCACCTGCACGTGTCTTCTGTCCAATCAGATGAGCTCCTGCACAGTAAACACTCCCACCCACTGGACTCCAACCACACCTCTGATGTGCTCAGATTTGTTCTAGAGCAATACAACGCCCTCTCCTGGCTGACGTGCGACCCTGCGACCCAGGACCGACGCTCCTGTCTGCCTGTTCACTTTGTGGTGCTCACCCAGATGTACAACTTTATCATGAACATGCTCTGAACTCTAACAGGATCAAACTGCTGAGATTTGATTGGATGGCTCGCTCAGGCGAATCGTGGAGTAACAACGAAGGATCCCCGACACTCAAAGGACCTCACGCTCCGTCAGGGCAAATGTGGAGGAAgcatccttcctcctcctccccagtGTATCTCACACAACACTGACTACAAGTttccaatcaatcaatcagatgCCAAGAATCCATTTTCGCATTTTGGAAGATCAAGGGACGTTTCATAAAGGAGAATAAATTGTCTTTTTAATGACTGTAGATTGCAATCTATGAAATTTTATCCTAATGAAATGCCtgcatatattatttattgtaaGTTTTTAAATGTGGAATTTTTAATGCTTAATATCTTTTATATATTACAAATCCTAGAGGGTGTGTACATCTCACTGTAAAGGAATTGGTTTAAAAagtgtaattttctcaattacaACACGGAAAAACCTGTTCAAGTGAATTTGCTGTAGATTGCTTTTAGAATATTATTTTTTCAAAGGGTACAGACCTTTTTATTGCCATGCTGTAAAAATGAAGTAAAAGCTGGCCTGGGCATTTGTGTCCCACCCAATGAGTGGAGGAGACTTACCTCTCTGTCTGCTTTGGCTCCAGAGTCTCTCGCACAGTAACTCAATGAGCTCTGCAGAGGAATTAAAAAGGTACATTGTcagattatatattttatataacagaTTTAGGTAATtgcgtgtgtatatgtgtacatATAATTGTGTGCCGCTACTGATGGTGCAGCTTCTGTTTTAGGAATAAAGTGCGTCTACCTTA

Function

NR:

description
PREDICTED: mediator of RNA polymerase II transcription subunit 13-like

GO:

id name namespace
GO:0006357 regulation of transcription by RNA polymerase II biological_process
GO:0016592 mediator complex cellular_component

KEGG:

id description
K15164 MED13; mediator of RNA polymerase II transcription subunit 13

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039822433.1 True 7959 mRNA 0.53 30 34977000 34999209

Neighbor

gene id symbol gene type direction distance location
LOC120554048 NA coding upstream 113672 34859139 ~ 34863328 (+)
LOC120554069 NA coding upstream 119822 34852750 ~ 34857178 (+)
LOC120571978 LOC102783856 coding upstream 161057 34811520 ~ 34815943 (+)
LOC120548831 NA coding upstream 175324 34795722 ~ 34801676 (+)
LOC120551697 LOC102783856,LOC101475349,LOC102310554 coding upstream 184596 34777446 ~ 34792404 (+)
LOC120547795 NA coding downstream 6148 35005357 ~ 35012845 (+)
trnap-agg_1 NA coding downstream 47440 35046649 ~ 35046720 (+)
picalmb picalm,LOC103364408,LOC102797574,LOC100697286,LOC104928943 coding downstream 168870 35168079 ~ 35192486 (+)
sytl2b LOC102313391,LOC102797281,LOC101479915 coding downstream 195934 35195143 ~ 35221174 (+)
hspa8b LOC100696748,LOC102796684 coding downstream 236921 35236130 ~ 35242169 (+)
G21714 NA non-coding upstream 5720 34971050 ~ 34971280 (+)
G21711 plch1,LOC103364399 non-coding upstream 34816 34941572 ~ 34942184 (+)
G21687 NA non-coding upstream 157385 34819395 ~ 34819615 (+)
G21681 NA non-coding upstream 334381 34642414 ~ 34642619 (+)
G21679 NA non-coding upstream 334918 34640763 ~ 34642082 (+)
G21728 NA non-coding downstream 15418 35014627 ~ 35014861 (+)
LOC120545939 NA non-coding downstream 243538 35242747 ~ 35279596 (+)
G21808 LOC100696479,LOC102233234,LOC101068011,LOC107083386,LOC104944607,LOC105939711 non-coding downstream 255983 35255192 ~ 35256775 (+)
G21822 NA non-coding downstream 290089 35289298 ~ 35290766 (+)
G21841 NA non-coding downstream 368841 35368050 ~ 35414776 (+)
LOC120547286 mbnl1 other upstream 1057055 33843364 ~ 33919945 (+)
trim59 trim59,LOC102781275 other upstream 1702990 33262746 ~ 33274010 (+)
stx1a stx1a,LOC102292079,LOC102198818,LOC102795677,LOC108240947 other upstream 1847026 33041399 ~ 33129974 (+)
LOC120573710 col26a1,LOC102078035 other upstream 2057977 32898357 ~ 32919023 (+)
G21267 NA other upstream 2079437 32896624 ~ 32897563 (+)
igsf9ba igsf9b other downstream 457553 35456762 ~ 35535087 (+)
pih1d2 pih1d2 other downstream 945228 35944437 ~ 35948800 (+)
G22099 wdr81 other downstream 1814639 36813848 ~ 36815638 (+)
G22106 wdr81 other downstream 1828701 36827910 ~ 36828411 (+)
dynll2a dynll2a,LOC107554284 other downstream 2264601 37263810 ~ 37269299 (+)

Expression


Co-expression Network