dynll2a (dynll2a,LOC107554284)


Basic Information

Item Value
gene id dynll2a
gene name dynll2a,LOC107554284
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 37263810 ~ 37269299 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU30179
GGAGCACAGCAGAGAGAACCAACCTACCTACATGCTTATTGTGGAAATCTTTTTAAAGCAATTAGCCGCAGCATCATCTAAAGCTTGTACCCCAGGCAGACTGAAATAGCCTACATCATCTTTTGAAACTAGTGTTTTCATTCGGCTCAAGAAAAGgcaggcaggcatcatcatcatccttaACCATGACTGACAGGAAAGCTGTGATCAAGAACGCAGACATGTCCGAGGACATGCAGCAGGACGCGGTGGACTGTGCCACCCAGGCCATGGAGAAGTACAACATAGAGAAGGACATCGCAGCCTACATCAAGAAGGAGTTTGACAAGAAGTACAACCCCACCTGGCACTGCATCGTCGGGAGGAACTTCGGCAGCTACGTCACCCACGAGACAAAGCATTTCATTTACTTCTACTTGGGCCAAGTGGCTATATTGCTCTTCAAGTCTGGCTGAGAATTTCCTGAAGGGTGTTGAGGAGGTTTTCTCCCTGAACCTAAATTGGAAATGCACTGGTGGCTGATGTCTCCCATACACTAATAATGACATACCATAATGATGCAAACCAGGCCATGCGCAAATGCATGGACTATACACTATTAAATGTATGTTACAGTAAGTTTACTTTTCGATAGTTGCCATTTGAATGCAACTGAAGTAGTTTTTGTTGATACTGTTAAATTCTAGGTTGTAAAAGATTTCAACGTGGCCCTTGATTGTAAAATAAAGGAAAGCTGTAGAATGTAATGGTGCATCTGCTTTCCTTCACAAGTGGCATTGCCAGAACCTGTTATGAGACTCCATCTGTCGGTTTAGATGGTAAAATCCTACTGCGTGCACCAGTTTAACACTTAATTATCTAGATTTTAACACGGGAACACGGAAAGAAGTCGATGAATGGGGCAAAATAGTCGTTTCACATGATGAGTTACTTCACGGCATTCCTTTGATTTCCAGGAGAACAAACCGCatgagttcagttcatagttcagtTGCTATTTTACTAATTTTAAAAGGAATTATATATGTACGTGCAAATACGAAacctttaatgtttatttggatATAAAATATCCAACGGATTTCAGAAAAGATGTCATCCAACACAGTTGACATTTTGGAACCAACACAAGCCAGTGCATGCATTTCCAGGGATGTTTAGTTTGTCAAGTTTCACTGTGAGGCACGGTAGAGCAAATAAAGCTCCCAAACAGTTGTTTAGCCTGTAATGTCCGAGTAATAACACTACAGACTGGTCACTCAAACCTTCCAACTCACCTACCTAGATATCAGTCCTATAAtcctgtgtttctgcatgtttgGAGGATAATGACCACACTTTCTTTAACTGTCATCAGACCCAAACAAAAGCTCACCTTGAAgctaaatagtttatttaactTTTGAGTATGTAGATATTGGACTGACCCGATGTAAAGCAGCGTCGGGAAGGTGATTTAGAGAAAAACATCTGCAGTCAACTCTACCAAGGCTACCAAGACCCCTGTGTTTCTGATTCACGTGTTGTCTTGTGTGGCTCgtaatactttttattttggcATTGTCAGTGTACTGCCAGACATGCAGGAAAGACGAAGCATTTAGGAGTTCTTCTTAAAGCAACTGCAAGGAGGCGTATCCCTTGTCTAGCACACTGATTTGgggttttttattttgtcatgtcAGTATAATTAATTGGAAAGGGCAAAACTTAATGTTTAGATTCTTTTAAGAGGGCAGTTTGGAGGGATTTAGTCATGCGGTTGGATAACACCACACATTTCTCTCTGTGCTGTAAGACAAGGTTTTAAGTTGCTCTCTTGCATAATCCAACAATGGGTAAAATGTGTATCTTTCAAGTGTTAGCTTGGATTGACATTGAGGGAAGTCTTCCTAACTTTTGTCAATGTTAACTGATTTAGAATTGTTTTTCTGGCATGTATTTTTGCTGTGTATATGTAGGAGCCGTTACAATGCTGTTAAATTTGCACAAAACGTGTGCCTGTCATTGCTCTCAACTGTAACCGGCTTGAGTACAATTGCACTTCATTAGAGTTATCCAGTAGGTTGCTACAGAACCAAAATCGTATAAACtcgataaaataaaaattaattgtTGACTTA
>XM_039779580.1
TGAAAAGCCTGAACACAACACACGCAGAGCCAAACGATACCTACCCGCTGCCAAGGTCTCGTTTCCTTTTAGCCCACAGTCAGTGGTGTACACTGTCAATGATGCATTGTGGGATGAAATAAGATGCCGGCAGACAGGAGCTGGAGAAAAACGCTTGGAACACACGGGAGGCTGCAGCTCAGCCAATGGCAGGGTGCAGCATGCAGCACAGGGGCGGGGAGCTGCTGGAGCACAGCAGAGAGAACCAACCTACCTACATGCTTATTGTGGAAATCTTTTTAAAGCAATTAGCCGCAGCATCATCTAAAGCTTGTACCCCAGGCAGACTGAAATAGCCTACATCATCTTTTGAAACTAGTGTTTTCATTCGGCTCAAGAAAAGgcaggcaggcatcatcatcatccttaACCATGACTGACAGGAAAGCTGTGATCAAGAACGCAGACATGTCCGAGGACATGCAGCAGGACGCGGTGGACTGTGCCACCCAGGCCATGGAGAAGTACAACATAGAGAAGGACATCGCAGCCTACATCAAGAAGGAGTTTGACAAGAAGTACAACCCCACCTGGCACTGCATCGTCGGGAGGAACTTCGGCAGCTACGTCACCCACGAGACAAAGCATTTCATTTACTTCTACTTGGGCCAAGTGGCTATATTGCTCTTCAAGTCTGGCTGAGAATTTCCTGAAGGGTGTTGAGGAGGTTTTCTCCCTGAACCTAAATTGGAAATGCACTGGTGGCTGATGTCTCCCATACACTAATAATGACATACCATAATGATGCAAACCAGGCCATGCGCAAATGCATGGACTATACACTATTAAATGTATGTTACAGTAAGTTTACTTTTCGATAGTTGCCATTTGAATGCAACTGAAGTAGTTTTTGTTGATACTGTTAAATTCTAGGTTGTAAAAGATTTCAACGTGGCCCTTGATTGTAAAATAAAGGAAAGCTGTAGAATGTAATGGTGCATCTGCTTTCCTTCACAAGTGGCATTGCCAGAACCTGTTATGAGACTCCATCTGTCGGTTTAGATGGTAAAATCCTACTGCGTGCACCAGTTTAACACTTAATTATCTAGATTTTAACACGGGAACACGGAAAGAAGTCGATGAATGGGGCAAAATAGTCGTTTCACATGATGAGTTACTTCACGGCATTCCTTTGATTTCCAGGAGAACAAACCGCatgagttcagttcatagttcagtTGCTATTTTACTAATTTTAAAAGGAATTATATATGTACGTGCAAATACGAAacctttaatgtttatttggatATAAAATATCCAACGGATTTCAGAAAAGATGTCATCCAACACAGTTGACATTTTGGAACCAACACAAGCCAGTGCATGCATTTCCAGGGATGTTTAGTTTGTCAAGTTTCACTGTGAGGCACGGTAGAGCAAATAAAGCTCCCAAACAGTTGTTTAGCCTGTAATGTCCGAGTAATAACACTACAGACTGGTCACTCAAACCTTCCAACTCACCTACCTAGATATCAGTCCTATAAtcctgtgtttctgcatgtttgGAGGATAATGACCACACTTTCTTTAACTGTCATCAGACCCAAACAAAAGCTCACCTTGAAgctaaatagtttatttaactTTTGAGTATGTAGATATTGGACTGACCCGATGTAAAGCAGCGTCGGGAAGGTGATTTAGAGAAAAACATCTGCAGTCAACTCTACCAAGGCTACCAAGACCCCTGTGTTTCTGATTCACGTGTTGTCTTGTGTGGCTCgtaatactttttattttggcATTGTCAGTGTACTGCCAGACATGCAGGAAAGACGAAGCATTTAGGAGTTCTTCTTAAAGCAACTGCAAGGAGGCGTATCCCTTGTCTAGCACACTGATTTGgggttttttattttgtcatgtcAGTATAATTAATTGGAAAGGGCAAAACTTAATGTTTAGATTCTTTTAAGAGGGCAGTTTGGAGGGATTTAGTCATGCGGTTGGATAACACCACACATTTCTCTCTGTGCTGTAAGACAAGGTTTTAAGTTGCTCTCTTGCATAATCCAACAATGGGTAAAATGTGTATCTTTCAAGTGTTAGCTTGGATTGACATTGAGGGAAGTCTTCCTAACTTTTGTCAATGTTAACTGATTTAGAATTGTTTTTCTGGCATGTATTTTTGCTGTGTATATGTAGGAGCCGTTACAATGCTGTTAAATTTGCACAAAACGTGTGCCTGTCATTGCTCTCAACTGTAACCGGCTTGAGTACAATTGCACTTCATTAGAGTTATCCAGTAGGTTGCTACAGAACCAAAATCGTATAAACtcgataaaataaaaattaattgtTGACTTATTA
>XM_039779581.1
GAGGACGACAACTGATGAAAAGCCTGAACACAACACACGCAGAGCCAAACGATACCTACCCGCTGCCAAGGTCTCGTTTCCTTTTAGCCCACAGTCAGTGGTGTACACTGTCAATGATGCATTGTGGGATGAAATAAGATGCCGGCAGACAGGAGCTGGAGAAAAACGCTTGGAACACACGGGAGGCTGCAGCTCAGCCAATGGCAGGGTGCAGCATGCAGCACAGGGGCGGGGAGCTGCTGGAGCACAGCAGAGAGAACCAACCTACCTACATGCTTATTGTGGAAATCTTTTTAAAGCAATTAGCCGCAGCATCATCTAAAGCTTGTACCCCAGGCAGACTGAAATAGCCTACATCATCTTTTGAAACTAGTGTTTTCATTCGGCTCAAGAAAAGgcaggcatcatcatcatccttaACCATGACTGACAGGAAAGCTGTGATCAAGAACGCAGACATGTCCGAGGACATGCAGCAGGACGCGGTGGACTGTGCCACCCAGGCCATGGAGAAGTACAACATAGAGAAGGACATCGCAGCCTACATCAAGAAGGAGTTTGACAAGAAGTACAACCCCACCTGGCACTGCATCGTCGGGAGGAACTTCGGCAGCTACGTCACCCACGAGACAAAGCATTTCATTTACTTCTACTTGGGCCAAGTGGCTATATTGCTCTTCAAGTCTGGCTGAGAATTTCCTGAAGGGTGTTGAGGAGGTTTTCTCCCTGAACCTAAATTGGAAATGCACTGGTGGCTGATGTCTCCCATACACTAATAATGACATACCATAATGATGCAAACCAGGCCATGCGCAAATGCATGGACTATACACTATTAAATGTATGTTACAGTAAGTTTACTTTTCGATAGTTGCCATTTGAATGCAACTGAAGTAGTTTTTGTTGATACTGTTAAATTCTAGGTTGTAAAAGATTTCAACGTGGCCCTTGATTGTAAAATAAAGGAAAGCTGTAGAATGTAATGGTGCATCTGCTTTCCTTCACAAGTGGCATTGCCAGAACCTGTTATGAGACTCCATCTGTCGGTTTAGATGGTAAAATCCTACTGCGTGCACCAGTTTAACACTTAATTATCTAGATTTTAACACGGGAACACGGAAAGAAGTCGATGAATGGGGCAAAATAGTCGTTTCACATGATGAGTTACTTCACGGCATTCCTTTGATTTCCAGGAGAACAAACCGCatgagttcagttcatagttcagtTGCTATTTTACTAATTTTAAAAGGAATTATATATGTACGTGCAAATACGAAacctttaatgtttatttggatATAAAATATCCAACGGATTTCAGAAAAGATGTCATCCAACACAGTTGACATTTTGGAACCAACACAAGCCAGTGCATGCATTTCCAGGGATGTTTAGTTTGTCAAGTTTCACTGTGAGGCACGGTAGAGCAAATAAAGCTCCCAAACAGTTGTTTAGCCTGTAATGTCCGAGTAATAACACTACAGACTGGTCACTCAAACCTTCCAACTCACCTACCTAGATATCAGTCCTATAAtcctgtgtttctgcatgtttgGAGGATAATGACCACACTTTCTTTAACTGTCATCAGACCCAAACAAAAGCTCACCTTGAAgctaaatagtttatttaactTTTGAGTATGTAGATATTGGACTGACCCGATGTAAAGCAGCGTCGGGAAGGTGATTTAGAGAAAAACATCTGCAGTCAACTCTACCAAGGCTACCAAGACCCCTGTGTTTCTGATTCACGTGTTGTCTTGTGTGGCTCgtaatactttttattttggcATTGTCAGTGTACTGCCAGACATGCAGGAAAGACGAAGCATTTAGGAGTTCTTCTTAAAGCAACTGCAAGGAGGCGTATCCCTTGTCTAGCACACTGATTTGgggttttttattttgtcatgtcAGTATAATTAATTGGAAAGGGCAAAACTTAATGTTTAGATTCTTTTAAGAGGGCAGTTTGGAGGGATTTAGTCATGCGGTTGGATAACACCACACATTTCTCTCTGTGCTGTAAGACAAGGTTTTAAGTTGCTCTCTTGCATAATCCAACAATGGGTAAAATGTGTATCTTTCAAGTGTTAGCTTGGATTGACATTGAGGGAAGTCTTCCTAACTTTTGTCAATGTTAACTGATTTAGAATTGTTTTTCTGGCATGTATTTTTGCTGTGTATATGTAGGAGCCGTTACAATGCTGTTAAATTTGCACAAAACGTGTGCCTGTCATTGCTCTCAACTGTAACCGGCTTGAGTACAATTGCACTTCATTAGAGTTATCCAGTAGGTTGCTACAGAACCAAAATCGTATAAACtcgataaaataaaaattaattgtTGACTTATTA

Function

symbol description
dynll2a Predicted to enable cytoskeletal motor activity. Predicted to act upstream of or within microtubule-based process. Located in P granule and nucleus. Is expressed in central nervous system; hindbrain; lateral line ganglion; polster; and rhombomere. Orthologous to human DYNLL2 (dynein light chain LC8-type 2).

NR:

description
PREDICTED: dynein light chain 2, cytoplasmic-like

GO:

id name namespace
GO:0007017 microtubule-based process biological_process
GO:0005875 microtubule associated complex cellular_component
GO:0005634 nucleus cellular_component
GO:0043186 P granule cellular_component

KEGG:

id description
K10418 DYNLL; dynein light chain LC8-type

RNA

RNA id representative length rna type GC content exon number start site end site
TU30179 False 2123 TUCP 0.50 3 37264051 37269296
XM_039779580.1 False 2352 mRNA 0.42 3 37263825 37269299
XM_039779581.1 True 2363 mRNA 0.42 3 37263810 37269299

Neighbor

gene id symbol gene type direction distance location
srsf1a srsf1,LOC103378294,LOC107379977,LOC103362657,LOC101475367,LOC105934529 coding upstream 1189 37259355 ~ 37262621 (+)
aldoca LOC103362656,LOC101475068,LOC100696248,LOC104963828,LOC106528826,LOC108247274,LOC102782670 coding upstream 9415 37250603 ~ 37254395 (+)
rskra LOC104963829 coding upstream 15226 37240554 ~ 37248584 (+)
LOC120552939 NA coding upstream 28380 37211350 ~ 37235430 (+)
glod4 glod4,LOC102784280 coding upstream 52618 37206149 ~ 37211192 (+)
hnf1ba hnf1b coding downstream 52482 37321781 ~ 37339856 (+)
synrg synrg coding downstream 83595 37352894 ~ 37408427 (+)
tlcd1 NA coding downstream 298304 37567603 ~ 37576429 (+)
rab34a rab34 coding downstream 308684 37577983 ~ 37584155 (+)
proca1 NA coding downstream 339552 37608851 ~ 37615557 (+)
G22201 NA non-coding upstream 6876 37256131 ~ 37256934 (+)
G22129 NA non-coding upstream 275710 36949747 ~ 36988100 (+)
G22107 NA non-coding upstream 434331 36829144 ~ 36829479 (+)
G22105 wdr81 non-coding upstream 437291 36822983 ~ 36826519 (+)
G22103 NA non-coding upstream 442297 36821175 ~ 36821513 (+)
G22203 NA non-coding downstream 10331 37279630 ~ 37279982 (+)
G22204 NA non-coding downstream 13547 37282846 ~ 37283279 (+)
G22332 NA non-coding downstream 361024 37630323 ~ 37633151 (+)
G22335 LOC102298130,LOC101483095,LOC101482452,LOC102201726,LOC100699189,LOC102776710,LOC102301638 non-coding downstream 368198 37637497 ~ 37639592 (+)
G22365 NA non-coding downstream 400655 37669954 ~ 37670157 (+)
G22106 wdr81 other upstream 435399 36827910 ~ 36828411 (+)
G22099 wdr81 other upstream 448172 36813848 ~ 36815638 (+)
pih1d2 pih1d2 other upstream 1315010 35944437 ~ 35948800 (+)
igsf9ba igsf9b other upstream 1728723 35456762 ~ 35535087 (+)
LOC120547286 mbnl1 other upstream 3343865 33843364 ~ 33919945 (+)
G22263 LOC103133141 other downstream 171573 37440872 ~ 37443828 (+)
robo1 robo1 other downstream 665637 37934936 ~ 38304790 (+)
brca2 NA other downstream 1953427 39222726 ~ 39239448 (+)
G22731 NA other downstream 2413346 39682645 ~ 39686026 (+)
G22827 LOC103363423 other downstream 2674276 39943575 ~ 39945875 (+)

Expression


Co-expression Network