G22129


Basic Information

Item Value
gene id G22129
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 36949747 ~ 36988100 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU30109
agatttatactGGACGGCAGCTACACAGATGTAGCTGAACAAATGaccgaaaaagtgataaattatggacatcgagtggataaatcttggatgtaagcgtttggatttattgctgaacaactccgCAAAGACGCACGAgctccaggctggatagaaagcCTTCTGTAAAGGCTACGAAGATAAAACAGACATCACTGTGATCAGTAGCTTATTGGCTATTAGCTGTTGAAGTCGGCTAGCAGCTAGCGCCGAAACTGACCGAAAACGAGATAAATTACggacatcaagtggataaatcttggatgtaagagtgtggatttattgctgaataACTCCGTAAAGAGGCAcaacttccaggctggatataaaaccttctgtaaaggctacaaagaAACCAAAGACAGGGCCGTGATGGCTAACTCGTTAGCTTTCCGCTGAAAAAAACGGCTGTAACACAATGTTAGTTCACTTACTAAATCTTACTCTATAAGTCAGAAGAATTGTTAATAAATGGCAAATTAGGTCAATACCCAATAGTTAAGTCTTGATGtggtgaataataataattttacattaatTGGAACTTAGTGAGAGGTCATCATATTTCACTGAAGACAATAATTGTGTAACTCTTAAAGCGctcaataaatatacagtatatatatatttttccattGTATATCCTGTTGTTCTCTTCTTTTATTCTGTAATATCAGGATTAATTGACTTTagtatttactgtaaaaaaaagaaagaaagaaaaactaatTTGTCTGATTAGTCAGTTTCCATTTTAAATGAGTAAACCTCTATGGTAACAGTAAGAGGTAACAAAGCCTCACTTCACTATTTCTTACCattaaaaactaattttaaGAAATTCAAGAACTTATTTGCAATTGCAAAACGTGGTGGTTGAATTTATGTCCAggagtatttatatatttatttaatatatatttagtatttattcattattcaCCCCTTATTTAGAAATAACTACTCTATTATTAGTTTAATGTACCACAAATATGACAATGAACAATATCAAATAATTAACATGCACAGGACAATCACCATTTAACCATTAGATCAGTATTTGCCATTTACTAACATTGTTGTAAAAAATGCTGCCCAGCATAAATACTTCACTCCTCCAGTGTATCATCATGGAAGGAAAATATCACTATGTGTAATACAGACTTATAAACTCACTTTGATTATCGTGTACACATGGATGGGAATGATCATGTCGTTACTTGGATGACAATGTTTCAGTATTACCATTTTAAATGCAAAACGAAATGGAGTTAAGTATTTCAGTATTGTTTCTACAACATTATATAATTACCaataatgctaatcggtgcacTGCAATTACAGGGGCGGTACTACAGGGAGTCATACATACTTAATAGTAATCAAATAGCTAATTACTGAAGCACCTATGGTGTACAGGCggtgaaagaaaaacaagacaGCTCCATTCTGATGTTCCACTCAGCTTTGCAggttttcagttaaaccaagaGCCCCTTAGAACTCTTAAGCCCTTTTTCTTTCATAGCAGGTATAAAAACCTTGTCTAAGAAATCCGCTCACACACTACTTCAATCCAAACCTATAAAATAAACGCTCAGTTGTGAAAAGCCGGCAGTAGTGAGCTGCAGTGAGAACATGCTTTATGCCAACACTGGCCTCCCTGTGTCCTCTGATTCCTCTGCAGAGGCATACACTTGTCATAGCTGTCTTCATGTTCACAATAAATACAACTCTACAACAAATAAACCtagacactcactcacacacgcacatacatatatacagtatctaaaaCATGTCAAAGCAAAATACCAATTACATAAAATGCACTTTGTCCTGTAGTAACAGTAAAACTCAATACTTTGGTCAAACAAATCAGATAAGTTTGCATGTCTAcacaacatcaaatacaatttAAGGCAAAAATCAACCTTTCAACAAGTCAAACAACAAAAGGTTCAAAAACATACATTGAAAATATTTCTATTTACAATATTTCCTCatagaaaaatatgtttgacttttttgaaTGTTTGAAACATGGCCACAGTAAGACTCAATTCAACCCAGAGTGCACAAGACAGCATTGGATTTCAACACAAATCTATTGGTTCCAGTGCAGCTGTAGTGGAATTTCAACTGGCATGGGGTGTGTTGTACAATATTCTGCAAGCTACTGCAACTACTACCAAGAAAGTGAACTAATGCTGCCAATGATGATAATTACATTGTCATTTTAAGCACGAAGAAGTTCTGATCACTTTTTACATCTGTCTATCAATTTGTAAACATTTTTTGGTCAAACCAATACTTTCCTACAAACTATTTCTGTTTAAAACCTCTATTAGTTACTGTAACCAACAGGCAGCAACAGTGCACAATGTGCAGGAAAAACTAGAACTACAAATACAACTCTTTGTTTCTGAAGTGAGTACTGCAGCTAAATTGAGAACCACTGCGGTGTACTTCGATAGTGCAAATGCGACCTCAGTGGCCCAAGCCGTGCGCGAGCTGACCCGGTCTGAGGCGGCTTTCGGAAGGCCTGTTCTGCCAGACTGGTTGTGGGGACGGAAGGTGGTAGTAACCACAATGCGAGGGAGACATCTATCAGTGGAAGTGGAATGCAGGCAGAGGCCAGTGTTCGGTAAGGTCGGCTCATTGGGGCTTCAGATCGCAGAGCTCGTGTACATATTGAACCTAAATGTCACAGTGCTTCTGTGTCCAAAGGCCCACACGGAGATGATGAGTGTGGACTATTTACATGGGTGGATGGTTAGTGCAGGAGTCAGTCAACATGGCCACCTGTCAGCACAGCAGTCTGCTAATCTGTTGCCAAAGTCTCAACAGGTTCAAAGTCCCCTCTGTCGTCCCATTTGTCATCCTctgaagtgtttgtgtgtgcatgaatatcaattatatatcaatatatatatatcaattatCTCAAGTACATTCTTTTGATTTTACAATTGGACACAATTTAACTTGACACAGACATTCGCAAAAATCATTACCATCCCTCGGCAACTGTTTAAAGTTTCAGGCACAAAGACTAAGTGACGTAATCCGCCAAGCGGGTcacggaaaaaaaagaagagccgAACAGGTGGCAAAGTGTGGAGGGCCAAGCAGGAGGTAAAGCTGAGCTGCGAGGGATACCAGCAGAGGATCCAATGTACATGTACAGTAGGTAGAGGTGACACTGTCAAATGAGAGAGGAAATATTAGTGAAGCGTCTCACATTCCAGGAAAAGTTAACACATTGATTAGCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU30109 True 3314 lncRNA 0.50 2 36949747 36988100

Neighbor

gene id symbol gene type direction distance location
slc47a3 LOC108246319,LOC106511364 coding upstream 40085 36902841 ~ 36909662 (+)
slc13a5b slc13a5 coding upstream 51541 36887899 ~ 36898206 (+)
rtn4rl1b rtn4rl1 coding upstream 242597 36551424 ~ 36707150 (+)
hic1 hic1 coding upstream 585604 36351096 ~ 36364143 (+)
tsr1 tsr1 coding upstream 610860 36328097 ~ 36338887 (+)
txndc17 txndc17 coding downstream 147992 37136092 ~ 37138177 (+)
nxn nxn coding downstream 150889 37138989 ~ 37200571 (+)
glod4 glod4,LOC102784280 coding downstream 218049 37206149 ~ 37211192 (+)
LOC120552939 NA coding downstream 223250 37211350 ~ 37235430 (+)
rskra LOC104963829 coding downstream 252454 37240554 ~ 37248584 (+)
G22107 NA non-coding upstream 120268 36829144 ~ 36829479 (+)
G22105 wdr81 non-coding upstream 123228 36822983 ~ 36826519 (+)
G22103 NA non-coding upstream 128234 36821175 ~ 36821513 (+)
G22102 wdr81 non-coding upstream 128702 36820230 ~ 36821045 (+)
G22101 NA non-coding upstream 129883 36819406 ~ 36819864 (+)
G22201 NA non-coding downstream 268031 37256131 ~ 37256934 (+)
G22203 NA non-coding downstream 291530 37279630 ~ 37279982 (+)
G22204 NA non-coding downstream 294746 37282846 ~ 37283279 (+)
G22332 NA non-coding downstream 642223 37630323 ~ 37633151 (+)
G22335 LOC102298130,LOC101483095,LOC101482452,LOC102201726,LOC100699189,LOC102776710,LOC102301638 non-coding downstream 649397 37637497 ~ 37639592 (+)
G22106 wdr81 other upstream 121336 36827910 ~ 36828411 (+)
G22099 wdr81 other upstream 134109 36813848 ~ 36815638 (+)
pih1d2 pih1d2 other upstream 1000947 35944437 ~ 35948800 (+)
igsf9ba igsf9b other upstream 1414660 35456762 ~ 35535087 (+)
LOC120547286 mbnl1 other upstream 3029802 33843364 ~ 33919945 (+)
dynll2a dynll2a,LOC107554284 other downstream 275710 37263810 ~ 37269299 (+)
G22263 LOC103133141 other downstream 452772 37440872 ~ 37443828 (+)
robo1 robo1 other downstream 946836 37934936 ~ 38304790 (+)
brca2 NA other downstream 2234626 39222726 ~ 39239448 (+)
G22731 NA other downstream 2694545 39682645 ~ 39686026 (+)

Expression


Co-expression Network