nxn (nxn)


Basic Information

Item Value
gene id nxn
gene name nxn
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 37138989 ~ 37200571 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791039.1
ATGTCGGAGTTTCTGGTGAGTCTATTCGGGGAGCGGCTCGTCAACAGCGAGAAAGCCGAGGTGGATGTGCAGTCGCTGGGCGCCAAGCTGTCCCTGGTCGGGCTCTTCTTCGGATGCAGCCTGAACGCCCCGTGCAAGCAGTTCAACGGCAGCCTGTGCGAGTTTTACAGCAGGTTCAAAAAGGCGTCTGAACATAAGGACAAATTGGAAATCGTCTTCATTTCGTCTGATCAGGACCAGAAACACTGGCAAGACTTTTTGCAGGAGATGCCATGGCCTGCCTTACCTCtcaaagacagacacaaaaaGATGAAGCTGTGGAACAAATACAAAGTAACTAGTATCCCATCTCTGGTGTTTGTGGACGCAGCCACGGGGAAGGTGGTGTGTCGGAATGGTCTACTGGTGGTCAGAGATGACCCTAAAGGCCTGGAGTTCCCCTGGGGGCCGAAGCCATTTGCAGAGGTGGTGGCAGGGCCTCTGCTCAGGAACAACAGGCAGACAACTGACAGCAGCTCTCTGGAAGGCCACTACGTGGGCGTCTACTTCTCAGCACACTGGTGTCCGCCATGCCGCAGTTTGACCCGAGTCTTGGTGGAATCATATCGAACCGTCAAAGAGTCGGGTCAGAAGTTTGAGATTGTGTTTGTCAGCGCTGACAGGTCAGAGGAGTCCTTTATGCAGTACTTCAGCGAGATGCCGTGGTTGGCGGTGCCATATTCGGACGAGGCTCGACGGTCACGACTCAACAGACTTTATGGAATACAAGgTATTCCCACGCTGATTCTGTTGGACGCAGAGGGTCACGTGATTACGCGACAGGGCCGCGTGGAGGTGCTGAACGACCCGGAGTGCCGGCTCTTTCCCTGGCACCCTCGGCCCGTGCTGGAGCTCAGCGAGTCCAACGCGGTGCAGCTCCACGAGGGGCCCTGCCTCGTCCTGTTTGTGGACGCTGAAGAGGAAGGTGAATTGGAGCCAGCAAAGGAGCTGATTCAGCCAATTGCGGAGAAGCTTATGGCCAAGTACAAAGCCAAGGAGGAGGAGATGCCGCTGCTGTTCTTTGTGGCTGGAGAGGATGACATGAGTGACTCCCTGCGGGACTACACTAACCTCCCAGAAGCAGCTCCTCTTCTCACCATCCTGGACATGTCGGCCCGGGCCAAGTATGTTCGCGACGTAGAAGAGATCACGCCGGCCGAAGTGGAGCAATTTGTCGGCGATTTCCTGGCTGAAAAGCTCAAACCAGAGCCCATCTAAAGAGAAAGTCCAAATATAAATCGGACATACCATATGGGACTCACTCCATCATCGAACCCCGACCTGTTgctaccccccctccccctcaccCTTCCCAGCCTCCCACTATCTCTCCTGCCTCCCCCCTGACTTTGTCAGACTGTTAGAGAGATGTCTCACTTTTTActgacattttaacattttttagaCATGTTCCTCTTTTTCCTGTGGTGCCTTGCATTGACGATAGTCCctacagtaatatatatatgGAGATTCtgttggttctttttttttttttttttttttttggcctaaAGTCACTCTATAGCTTCTGAACTCTAGAGAAAACCTGAGAATTACTCAGTGgacctagcctgacaagccagacccacatgaccctggctgcaaattattGATTGATGATTTCTAGGCTACAGTGGACCTACTTATTCAGCTGATTCTTTGCTTTCCGTTTTGTCTGCGTGATCTTTGTTACTTTTGGTTTCTGAATGATGTTGAGAAAgaataaaatgcatttttacaGTTGTAATTCACATGTAGTGCAAATGTGCTAAACCTCAGTTGGATGTAGCCGCAAGCCTTTATGGCcccatttaaagaaaaaaactaaaaccggTGCACATACAGTAAAGATCACATTATACTTGCTTGTAACAGACCAATGACTGATGTTTTAAAACCCCTGTGTCTTGTTGTGCGTGTTATGTGAGTGAAAGTCATCTCTTGCCGGTTGTTGATGGTGGTTCTCATCTCAAAGTCATTATGAGGATTTTCTGTGAAGGTCCCTAATGAAAAGGTTATTTCTGAAGGAGCAGAAATGGCATTTGAAGTGTTGATTGTATAAATCCCTGTATTCTGTTACTTAAGTACTGAATTGTCACACCCATTAAAAATTCACTGGCAAGCA

Function

symbol description
nxn Predicted to enable protein-disulfide reductase (NAD(P)) activity. Predicted to be involved in circulatory system development; negative regulation of Wnt signaling pathway; and negative regulation of protein ubiquitination. Predicted to act upstream of or within Wnt signaling pathway and cell differentiation. Predicted to be located in cytosol and nucleus. Is expressed in several structures, including basal plate midbrain region; brain; immature eye; lens; and neural plate. Human ortholog(s) of this gene implicated in Robinow syndrome. Orthologous to human NXN (nucleoredoxin).

NR:

description
PREDICTED: nucleoredoxin

GO: NA

KEGG:

id description
K17609 NXN; nucleoredoxin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791039.1 True 2167 mRNA 0.49 8 37138989 37200571

Neighbor

gene id symbol gene type direction distance location
txndc17 txndc17 coding upstream 812 37136092 ~ 37138177 (+)
slc47a3 LOC108246319,LOC106511364 coding upstream 229327 36902841 ~ 36909662 (+)
slc13a5b slc13a5 coding upstream 240783 36887899 ~ 36898206 (+)
rtn4rl1b rtn4rl1 coding upstream 431839 36551424 ~ 36707150 (+)
hic1 hic1 coding upstream 774846 36351096 ~ 36364143 (+)
glod4 glod4,LOC102784280 coding downstream 5578 37206149 ~ 37211192 (+)
LOC120552939 NA coding downstream 10779 37211350 ~ 37235430 (+)
rskra LOC104963829 coding downstream 39983 37240554 ~ 37248584 (+)
aldoca LOC103362656,LOC101475068,LOC100696248,LOC104963828,LOC106528826,LOC108247274,LOC102782670 coding downstream 50032 37250603 ~ 37254395 (+)
srsf1a srsf1,LOC103378294,LOC107379977,LOC103362657,LOC101475367,LOC105934529 coding downstream 58784 37259355 ~ 37262621 (+)
G22129 NA non-coding upstream 150889 36949747 ~ 36988100 (+)
G22107 NA non-coding upstream 309510 36829144 ~ 36829479 (+)
G22105 wdr81 non-coding upstream 312470 36822983 ~ 36826519 (+)
G22103 NA non-coding upstream 317476 36821175 ~ 36821513 (+)
G22102 wdr81 non-coding upstream 317944 36820230 ~ 36821045 (+)
G22201 NA non-coding downstream 55560 37256131 ~ 37256934 (+)
G22203 NA non-coding downstream 79059 37279630 ~ 37279982 (+)
G22204 NA non-coding downstream 82275 37282846 ~ 37283279 (+)
G22332 NA non-coding downstream 429752 37630323 ~ 37633151 (+)
G22335 LOC102298130,LOC101483095,LOC101482452,LOC102201726,LOC100699189,LOC102776710,LOC102301638 non-coding downstream 436926 37637497 ~ 37639592 (+)
G22106 wdr81 other upstream 310578 36827910 ~ 36828411 (+)
G22099 wdr81 other upstream 323351 36813848 ~ 36815638 (+)
pih1d2 pih1d2 other upstream 1190189 35944437 ~ 35948800 (+)
igsf9ba igsf9b other upstream 1603902 35456762 ~ 35535087 (+)
LOC120547286 mbnl1 other upstream 3219044 33843364 ~ 33919945 (+)
dynll2a dynll2a,LOC107554284 other downstream 63239 37263810 ~ 37269299 (+)
G22263 LOC103133141 other downstream 240301 37440872 ~ 37443828 (+)
robo1 robo1 other downstream 734365 37934936 ~ 38304790 (+)
brca2 NA other downstream 2022155 39222726 ~ 39239448 (+)
G22731 NA other downstream 2482074 39682645 ~ 39686026 (+)

Expression


Co-expression Network