G22105 (wdr81)


Basic Information

Item Value
gene id G22105
gene name wdr81
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 36822983 ~ 36826519 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU30080
GAATCTTTTGCTCTTTCTCCCGAGACTCTTCTGATGGATCATGGTCATCCTCTTCCTGCTCTCCCACAATGCCTTTATCAGTCTCTTCCAGTGCCATTCCATTCATAAACTCACCCTCCAGAGTGGCAACTGTAGCGCCTGAAACGTCTGTGCAGCCAGAGAGCTCCAGGTTGGCAACAGTAGGGTCGTCTGTCCGCTCTTTACCCTCATTAGTCTCGGTCACCTCTTCTTCCTccagctctcctccctcctctccctcactAGCGTGTTTCAGGTCCTGGCTGCTGTCAGCTGATTTGAGACTAGCTCTATCCCGCATTGAGTCTCCATCACCCAGTGAGAGCTCACTTGTGCTGCTTTTGTCACTTAGTTTCCCCACACTTAGAGATTCCTGGTCTTGATCCTTGGCTGCAGAGTTCTGGCTCTGCGGTTTCCCAGCAGCCACCCCTGCTCCACTGTTGACATAGAACTCATTCTGAAAGTCCTCTGCCTCTGAGAGAAAAACCTGGTCATTGAGACTGATGCCAGAGGAGTAGTCGACCATACCCGACTCCCCCACCACGCCGACTCCTCCACTTGCACCACCGCCACTTCCCATTTTCCCGCTAACAGATGCAGAAGATTGCTGCACCTCGCCACATTGAtagtcttcttcctcttctagaTTACATGTGCCACTCCTCAACCCTTTGCCAGCTTCCCCGCCCGAGCCTGAGATGCAGCTTTCAAAGCCAGTGATGACCTGCAGCACATGGGGGAGTAGGCTGGACAGAAAGGCCTGCAGGCCGAGCCTCACAATCAGCTGCAGAATGAAACAGTCAGTGTAGAGATAGAAACGTCCCCTTAGGCAGTGAGGGTTTTCATAAACATTGATCAGCGGCTTCAGTAGGtacttgtttgcatttctgGGACCCAGTACTCTAGAGATGGGCTCGAAAAGGTACCAAGTAGCATAGACAGCAGTGGACTCCTCAAGCATGAGGGCTAGAATGAAGGGCAAGAGAATTTCAAGACCCTCAGCTGTGATGTTACCCCGCAACAGTGTCTCAAGCTGCTGCCACAAGTTAAAGACAACATCTCTTCCTTGAAGACTACATGTGGTCTCCATCTTGGCATGGTAGGAAAAGATAAAATTATGAAGTGCTGCAAAATAGGAAGGGAAAGGAAAGGGGGTGATGATTGAGTTCAATAATTGGCAGGGGTTTGGGGGAGGGAGACCATCGCAGATGGGTTCATATTTGAAAAGAAGTGGATGTGGGCAATCTGGTACTTCTTTCTGTGCTATTCCAGAGTGCTTCTCTATTAGAAGCAGTATCTCAAGAGCATGATGCAAAGACAGTGGCACATCACGGAGGCTGGCAGAACATAGCTTCATTACAGCTTGGAAACGCTGTCTCAGGGGGGTGCCTGGTTTCAGTCCTCTCAGTTTAGAGGAGTGGAATATCTCAGCGATGAGAACACCAAGGGCCTGCATGTCTCTTTGGTAGAGCTGTGTAAGAGAGGGTAGAGATTCAATTATGACACCATCCTTCATGCAGTCAGTAGATCCTGCAGGATGCCATACTTCAGCGTGCAGACTCTTTACCAGGAAGTTATTCAACTTCTCCAGCTCTTCCAACGGCTGCAATGGGTTGAAGCCTTCAGGGAGGACGATCTTGATATCCTCTGCATTTGTGGCAGTAACACTAACCTCCCCATGTTTTTTGTTCGTTGACCCACCTCTTTGTAACATGGCACTGCGTAAACCAGGGCCTAAGCCGCTTGTGAAGTCACCAGGGAATGAACTCGGGGACTGAGATACATTAAGTGCTGTGTGCTCTCCTCCCATCTTTCCTCCAGCCGTACTGATGCTTGGCATTGGCACAGAGCAGGGCGCAGAACTGGTTGAGCCAGCAGATGCTAATGAGTCCAGAGCTTCCATACCTTGTTCAAGCTCTTCATCTCTGTCTACCATGGTCCAGCCACTGGACTCACACCCTGTAGACTCTGGCACCATTTCATCCACAGTGTCAGCCCCACTGTCAATTTGAGGGATGTGTAGAGAAGGCACATTAAGAGCAGCAAGGCCAAGGAGAGGAGGTTCTGCTGGGGCGTACTGGGAAGGAGATAAGCGTTGTGGGTGGGGCTGGTCAAAGAGCTGAACTACACCATAGGTAGTAAGATTGGTGTGGTTGTCCACCAGGTGGAGGCACACGTTCTTGGCCTTGACAGCTTCTTTACCAGACAGCTTATAGCCAAATGTGAGATCTATCCAGTGATGCAAGTGCTGGGACACTTCTCTGCTCTCCAGAAGGCGTCGATGGACCTCAATAAATTCCTCACACGACTTGCACCAGGAAGGCACATCCAGGTCTGGCATGTCGGGGTGGATGGAGCGGAAAATGGAGGGATCTGTGTAGAACTCTGGAATGCACTCATCAGGGGTCCAGCTCTGCATGCGCTCCATACTGGCTGGGTATTCGTTCGGCTCCCACTGGGATCTAACATGGCTGCACAACACTGACTTGGGTGTCTGTCGAGCTTTGTAGACATAGTAGGTAATGTCTGAGAGCACATCAGATATGTGGTGAGGTACATGGAGATGGTCAGACTGTCCAGCACCGCCGGCACCTACAGAGCCACCAAGGTCTCCACCTACACCGCTACCACCAACCCCATTACCGACTGCAGCAGCCAAAGCCTCTTTGGTCATCTCATATGTGAAGTCCAGCTGCTTATCCCCTTTGTTCAGCCTGAACTTTGACCTCCTGAGGTCTCGGAATTTTCCAAATGGCACAGTAAAATCAACCACCCAAGGCAGCACTGGGTGATAATTAGGGTCTCCTTCTCGCCGTCCTGCTAACCTGTTGAGTTCCATCACGTAGCGGAAGTTACTGACTCGTCCATGGACCCAGTCCAGAACCAACTTCTTAAGCTCATCAAAGCAGTCTTTGCAAAGTATTTTGTTCTCTTGGCTCACACATGAATTGTTCCTTGGCAGGACATGTTTCGGCACTTGTCTGCCTGTAACGTCGCTGTTTGCATCCCATTCCGTCCCCAGTTCCTCATAATGGGCTAGGTTGAGCTTGAGGCGGCTGCAGAGCTGCTCATCTACAGCTACGTCCTGCAGGGAGAGCTCTCCACAAGACAGACCTGCTGCATGACATCCCTGCAGAGCTATCAGTAACTGGTAGAGAATGAACAAAACTTTGGCATGGCTGTTAGCAAGCTTGGCTGGGCTGAAGGAGACAATATCATGGAGTGAATACTGAGTATAAGGTAGAATCACGTAGAGCATTTCTGCTGTCTCCAGCAGACATTCTGCAGGCAGAACATTAGGACACAGATGGTCTGACTGGGACGTGGAAGAGCAAGATGAACTGGTTGGCAAGTAgttttctttctccttctctctggcCGGAGAAAGGGATGGTGACACTCTGTCAGATGAGATGAAGGTGGAATTGAAGAGCTTCTGTAAAGCATTACGCACTGCATCTACAGCTGCAACATGCATCTGCTCATTGGCTCCGGCATATGCCTGCACAAGTTTGTAAT

Function

symbol description
wdr81 Predicted to enable phosphatidylinositol 3-kinase regulator activity. Predicted to be involved in several processes, including aggrephagy; early endosome to late endosome transport; and regulation of phosphatidylinositol 3-kinase activity. Predicted to be located in bounding membrane of organelle and cytosol. Predicted to be extrinsic component of endosome membrane. Is expressed in several structures, including heart; liver; nervous system; optic vesicle; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in cerebellar ataxia, mental retardation and dysequlibrium syndrome and hydrocephalus. Orthologous to human WDR81 (WD repeat domain 81).

NR:

description
PREDICTED: WD repeat-containing protein 81

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU30080 True 3537 lncRNA 0.50 1 36822983 36826519

Neighbor

gene id symbol gene type direction distance location
rtn4rl1b rtn4rl1 coding upstream 115833 36551424 ~ 36707150 (+)
hic1 hic1 coding upstream 458840 36351096 ~ 36364143 (+)
tsr1 tsr1 coding upstream 484096 36328097 ~ 36338887 (+)
gmfg gmfg,LOC105934520,LOC107090391 coding upstream 529562 36291392 ~ 36293421 (+)
nkapd1 LOC104959953 coding upstream 853921 35965470 ~ 35969062 (+)
slc13a5b slc13a5 coding downstream 61380 36887899 ~ 36898206 (+)
slc47a3 LOC108246319,LOC106511364 coding downstream 76322 36902841 ~ 36909662 (+)
txndc17 txndc17 coding downstream 309573 37136092 ~ 37138177 (+)
nxn nxn coding downstream 312470 37138989 ~ 37200571 (+)
glod4 glod4,LOC102784280 coding downstream 379630 37206149 ~ 37211192 (+)
G22103 NA non-coding upstream 1470 36821175 ~ 36821513 (+)
G22102 wdr81 non-coding upstream 1938 36820230 ~ 36821045 (+)
G22101 NA non-coding upstream 3119 36819406 ~ 36819864 (+)
G22100 NA non-coding upstream 4286 36816979 ~ 36818697 (+)
G22080 NA non-coding upstream 74320 36748393 ~ 36748663 (+)
G22107 NA non-coding downstream 2625 36829144 ~ 36829479 (+)
G22129 NA non-coding downstream 123228 36949747 ~ 36988100 (+)
G22201 NA non-coding downstream 429612 37256131 ~ 37256934 (+)
G22203 NA non-coding downstream 453111 37279630 ~ 37279982 (+)
G22204 NA non-coding downstream 456327 37282846 ~ 37283279 (+)
G22099 wdr81 other upstream 7345 36813848 ~ 36815638 (+)
pih1d2 pih1d2 other upstream 874183 35944437 ~ 35948800 (+)
igsf9ba igsf9b other upstream 1287896 35456762 ~ 35535087 (+)
LOC120547286 mbnl1 other upstream 2903038 33843364 ~ 33919945 (+)
trim59 trim59,LOC102781275 other upstream 3548973 33262746 ~ 33274010 (+)
G22106 wdr81 other downstream 1391 36827910 ~ 36828411 (+)
dynll2a dynll2a,LOC107554284 other downstream 437291 37263810 ~ 37269299 (+)
G22263 LOC103133141 other downstream 614353 37440872 ~ 37443828 (+)
robo1 robo1 other downstream 1108417 37934936 ~ 38304790 (+)
brca2 NA other downstream 2396207 39222726 ~ 39239448 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_009264 wdr81 coding NC_007126.7 CM002899.2 26552948 ~ 26570948 (-)
grasscarp (Ctenopharyngodon idella) CI01000072_01391395_01404483 WDR81 coding CI01000072 null 1389526 ~ 1406073 (+)