txndc17 (txndc17)


Basic Information

Item Value
gene id txndc17
gene name txndc17
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 37136092 ~ 37138177 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039818867.1
AGTGGTAGTGTCACATTTGGGGTAGCTATTTCTACCGATTTCTACCAGGTCCAGGGTTGAGAAGAGCAGTATTTCTCATAACTCTTGTTAGTGCTTTCGTAGTCTAATATTTGAAGGTAGTACATTTCCACACTAGCTCGGTCTAAACGATGCCCCACTACGAAGAAGTGACTGTGCGCGGATATGATGAATTCTGTCAGGCTGTGTCtgagagaaaaggaaaggaTATTTTCGCTTATTTCTCTGGTGATAAAGACGCCCAGGGAAAGAGCTGGTGTCCGGACTGCGTGAAAGCGGAGCCAGTTGTTAGAGGAGAGATGACTCATCTTCCTCAGGGCTCGGTCTTCATCTACTGTCAAGTTGGAGAAAGGGCCTATTGGAAGGATTCAAATAATGACTTCAAGAAGACACTAAAGTTGAGTGGAGTTCCCACTCTGCTGCGATATGGCACACCTCAGAAGTTGGTGGAGGAAGAACTCTTTAAAGCAGATCTGGTGAGGATGATGTTCACGGAGGACTGAGGGAGCCTGCGCTGTTCACATCGGTCATTTCATCATTGCTCTACTGCTAAACAGTACATTTTACCACCATTCAATTCCAGCATCATTGACATCCATGCACAAGTTACATCTCCTCCTGTAATTTGATGCAAATCAGCAACTGTGTAAGTTTACAACCAAAATATTGAGCAACCTCCGTAAGACACAGCTATTCAATTAATTCTGTACTGGAACATCTGCAGAGACAAACACCTATAATCAATGTAACTCCTAAAAATCTTCTTGTGCTGCTTTTATGTGCAATCACTCAATCCTGATTTGTAATCTGAGTTTGATACATTTCTTCAAATGTAATGTTAATCTTAACGCACAAGGtaattataaaaacattttaggattttctttattgtgactattttttatgtgatttttttgtttttgtttgtttgtttgtgcctTGCAGTAGGACTCAAATAAAGTAACACTTAATTTA

Function

symbol description
txndc17 Predicted to enable protein-disulfide reductase (NAD(P)) activity. Predicted to be located in cytoplasm. Predicted to be active in cytosol. Orthologous to human TXNDC17 (thioredoxin domain containing 17).

NR:

description
PREDICTED: thioredoxin domain-containing protein 17

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039818867.1 True 993 mRNA 0.40 4 37136092 37138177

Neighbor

gene id symbol gene type direction distance location
slc47a3 LOC108246319,LOC106511364 coding upstream 226430 36902841 ~ 36909662 (+)
slc13a5b slc13a5 coding upstream 237886 36887899 ~ 36898206 (+)
rtn4rl1b rtn4rl1 coding upstream 428942 36551424 ~ 36707150 (+)
hic1 hic1 coding upstream 771949 36351096 ~ 36364143 (+)
tsr1 tsr1 coding upstream 797205 36328097 ~ 36338887 (+)
nxn nxn coding downstream 812 37138989 ~ 37200571 (+)
glod4 glod4,LOC102784280 coding downstream 67972 37206149 ~ 37211192 (+)
LOC120552939 NA coding downstream 73173 37211350 ~ 37235430 (+)
rskra LOC104963829 coding downstream 102377 37240554 ~ 37248584 (+)
aldoca LOC103362656,LOC101475068,LOC100696248,LOC104963828,LOC106528826,LOC108247274,LOC102782670 coding downstream 112426 37250603 ~ 37254395 (+)
G22129 NA non-coding upstream 147992 36949747 ~ 36988100 (+)
G22107 NA non-coding upstream 306613 36829144 ~ 36829479 (+)
G22105 wdr81 non-coding upstream 309573 36822983 ~ 36826519 (+)
G22103 NA non-coding upstream 314579 36821175 ~ 36821513 (+)
G22102 wdr81 non-coding upstream 315047 36820230 ~ 36821045 (+)
G22201 NA non-coding downstream 117954 37256131 ~ 37256934 (+)
G22203 NA non-coding downstream 141453 37279630 ~ 37279982 (+)
G22204 NA non-coding downstream 144669 37282846 ~ 37283279 (+)
G22332 NA non-coding downstream 492146 37630323 ~ 37633151 (+)
G22335 LOC102298130,LOC101483095,LOC101482452,LOC102201726,LOC100699189,LOC102776710,LOC102301638 non-coding downstream 499320 37637497 ~ 37639592 (+)
G22106 wdr81 other upstream 307681 36827910 ~ 36828411 (+)
G22099 wdr81 other upstream 320454 36813848 ~ 36815638 (+)
pih1d2 pih1d2 other upstream 1187292 35944437 ~ 35948800 (+)
igsf9ba igsf9b other upstream 1601005 35456762 ~ 35535087 (+)
LOC120547286 mbnl1 other upstream 3216147 33843364 ~ 33919945 (+)
dynll2a dynll2a,LOC107554284 other downstream 125633 37263810 ~ 37269299 (+)
G22263 LOC103133141 other downstream 302695 37440872 ~ 37443828 (+)
robo1 robo1 other downstream 796759 37934936 ~ 38304790 (+)
brca2 NA other downstream 2084549 39222726 ~ 39239448 (+)
G22731 NA other downstream 2544468 39682645 ~ 39686026 (+)

Expression


Co-expression Network