G130722


Basic Information

Item Value
gene id G130722
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 2098084 ~ 2098284 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU176037
gggaaattgacaacgatCCCCCATCAtactccagctctgcctctaacatagagggcgtattagtcggattcaggagttcctcaaagtgctccttccaccgccctattacctcctcagttgaggtcaacagtgtcccatccttactgtacacagcttggatggttccctgcttccccctcctgaggtggcgaacggttTTCC

Function

GO:

id name namespace
GO:0022412 cellular process involved in reproduction in multicellular organism biological_process
GO:0019538 protein metabolic process biological_process
GO:0007281 germ cell development biological_process
GO:0006508 proteolysis biological_process
GO:0003006 developmental process involved in reproduction biological_process

KEGG:

id description
ko04080 Neuroactive ligand-receptor interaction
ko04972 Pancreatic secretion
ko04974 Protein digestion and absorption
ko05164 Influenza A

RNA

RNA id representative length rna type GC content exon number start site end site
TU176037 True 201 lncRNA 0.53 1 2098084 2098284

Neighbor

gene id symbol gene type direction distance location
sdhaf3 sdhaf3 coding upstream 4486 2078233 ~ 2093598 (+)
col28a1a LOC103357135,LOC106588681 coding upstream 73579 1971060 ~ 2024505 (+)
rpa3 rpa3 coding upstream 152708 1932711 ~ 1945376 (+)
phf14 phf14 coding upstream 274160 1692674 ~ 1823924 (+)
nxph1 nxph1,LOC104927365,LOC103358892,LOC106588718,LOC108244452,LOC106570312 coding upstream 837428 1185673 ~ 1260656 (+)
tac1 tac1 coding downstream 111812 2210096 ~ 2216292 (+)
LOC120570829 LOC106674472,LOC106537358 coding downstream 183830 2282114 ~ 2299143 (+)
si:dkey-222b8.4 kiaa0895 coding downstream 232311 2330595 ~ 2356186 (+)
LOC120571676 LOC103375101 coding downstream 486257 2584541 ~ 2588952 (+)
LOC120571754 NA coding downstream 694549 2792833 ~ 2794731 (+)
G130717 NA non-coding upstream 21738 2075997 ~ 2076346 (+)
G130714 NA non-coding upstream 35850 2062010 ~ 2062234 (+)
G130656 glcci1,LOC102314340 non-coding upstream 232497 1863431 ~ 1865587 (+)
G130655 NA non-coding upstream 236941 1857030 ~ 1861143 (+)
G130653 NA non-coding upstream 249597 1848281 ~ 1848487 (+)
G130735 NA non-coding downstream 58205 2156489 ~ 2156722 (+)
G130740 NA non-coding downstream 65932 2164216 ~ 2164482 (+)
G130760 NA non-coding downstream 159864 2258148 ~ 2258541 (+)
G130805 NA non-coding downstream 258568 2356852 ~ 2409480 (+)
G130817 NA non-coding downstream 352907 2451191 ~ 2460395 (+)
G130504 NA other upstream 1226734 870810 ~ 871350 (+)
si:ch211-152p11.4 LOC106593811 other upstream 1716443 353305 ~ 381641 (+)
G130343 LOC107386814 other upstream 1828160 269176 ~ 269924 (+)
sf3a3 sf3a3 other downstream 950741 3049025 ~ 3076057 (+)
LOC120571299 rarb,LOC103362260 other downstream 1495261 3593545 ~ 3826146 (+)
G131253 NA other downstream 2402060 4500344 ~ 4500961 (+)
G131255 NA other downstream 2402784 4501068 ~ 4501732 (+)
G131277 NA other downstream 2491111 4589395 ~ 4599956 (+)

Expression


Co-expression Network